| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is sphX [H]
Identifier: 153947383
GI number: 153947383
Start: 3527122
End: 3528168
Strand: Reverse
Name: sphX [H]
Synonym: YpsIP31758_3134
Alternate gene names: 153947383
Gene position: 3528168-3527122 (Counterclockwise)
Preceding gene: 153947415
Following gene: 153949401
Centisome position: 74.7
GC content: 48.9
Gene sequence:
>1047_bases ATGAAATGGGGAAAACTGGCGCTCTTAAATGTCATTTTATGGCATAGCTATACTGTTTTTGCGCAATCAATAGCTTTAGT ACAGCCAGTGGCTTTAACCCGATCAGTGGCTTTAGTACTGCCAGTGACGCTAGCCTCTCCCTCAATTACCGTCTCTCCGT CGGTACCAATGCCAGTTGCCAACACCCTATCAGGAAACCTTTCCAGTGTTGGTTCTGACACGTTGGCCAATCTGATGTCA TTGTGGGCAAATGATTTCAATCATCACTATCCTGGCGTTAATCTGCAAATACAGGCTGCGGGGTCATCTACCGCTCCTGC TGCGCTGGCTGCCGGGGCAACGCAGCTTGGCCCAATGAGCCGGCCAATGAAAGCTGGCGAGATTGCTGCTTTTATTCAAC GCTATGGCTACCCACCGTTAGCCGTGCCAGTAGCCGTGGATGCGCTAGTGGTGTTTGTTCATCAGGATAACCCTCTGAAT AGGCTGACGTTATCGCAACTGGATGCTATTTTTTCGCAAAATCGCCGTTGTGGAGAACCCCAGAAAATTCAACGCTTCGG TGACTTGGGGTTGAGTGGCGATTGGGCGGCACGCCCCCTACAACGCTATGGTCGTAATTCTGCATCGGGGACGTATGGCT ATTTTAAGCGCCGGGTACTCTGTGATGGTGATTTTATAAATAATATCAACGAATTACCCGGATCTGCATCCGTGGTGCAA GCGGTGGCGGGTTCATTGAATGGCATCGGTTATTCCAGTATTGGTTTTCGTAACAGTGGTGTTAAATCACTGCCGTTGGC AGCGAGTGGGCAAGATTTTGTTATGCCAACTGCAGAAAATGTCAGTAATGGCCTCTATCCGTTATCACGCTATCTCTATA TTTATATTAATAAAGCACCAGGGCAGCCGCTGGAAGCACTCACTGCGGCATTTCTTGAGCGTGCGCTATCCCCCGAAGGG CAAAAGTTGGTCAGCCATGACGGCTATTTGCCATTACCGCCTGCTATGTTGAATAACACCCGAAAAACATTGGGTTTTAC TGACTAA
Upstream 100 bases:
>100_bases GGGTACCCGTTTTATTTTTACCTTACCGAACAGGTTGATTGTTCCAACTGTTTTAGTCGAGAATGCAGTCAAATCTTAAG ACGGTGCGGATAAAAGCCTA
Downstream 100 bases:
>100_bases TCTGCTCTTTATATGTACTCAAAAGTAGGGTCTATCGCTGTTTCAACCAACAAAAATAATTTTGGGTTATTCCGGTTGAG TGAAATTGATGGAGCCTGTG
Product: phosphate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALVLPVTLASPSITVSPSVPMPVANTLSGNLSSVGSDTLANLMS LWANDFNHHYPGVNLQIQAAGSSTAPAALAAGATQLGPMSRPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVHQDNPLN RLTLSQLDAIFSQNRRCGEPQKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFKRRVLCDGDFINNINELPGSASVVQ AVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVMPTAENVSNGLYPLSRYLYIYINKAPGQPLEALTAAFLERALSPEG QKLVSHDGYLPLPPAMLNNTRKTLGFTD
Sequences:
>Translated_348_residues MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALVLPVTLASPSITVSPSVPMPVANTLSGNLSSVGSDTLANLMS LWANDFNHHYPGVNLQIQAAGSSTAPAALAAGATQLGPMSRPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVHQDNPLN RLTLSQLDAIFSQNRRCGEPQKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFKRRVLCDGDFINNINELPGSASVVQ AVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVMPTAENVSNGLYPLSRYLYIYINKAPGQPLEALTAAFLERALSPEG QKLVSHDGYLPLPPAMLNNTRKTLGFTD >Mature_348_residues MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALVLPVTLASPSITVSPSVPMPVANTLSGNLSSVGSDTLANLMS LWANDFNHHYPGVNLQIQAAGSSTAPAALAAGATQLGPMSRPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVHQDNPLN RLTLSQLDAIFSQNRRCGEPQKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFKRRVLCDGDFINNINELPGSASVVQ AVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVMPTAENVSNGLYPLSRYLYIYINKAPGQPLEALTAAFLERALSPEG QKLVSHDGYLPLPPAMLNNTRKTLGFTD
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell inner membrane. Note=Found in the cytoplasmic membrane in a form that is closely associated with the cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37127; Mature: 37127
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALVLPVTLASPSITVSPSVPMPVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEECCCCCCCCH NTLSGNLSSVGSDTLANLMSLWANDFNHHYPGVNLQIQAAGSSTAPAALAAGATQLGPMS HHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHCCCHHCCCCC RPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVHQDNPLNRLTLSQLDAIFSQNRRCGEP CCCCHHHHHHHHHHHCCCCCHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCH QKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFKRRVLCDGDFINNINELPGSASVVQ HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHEEEECCHHHHHHHHCCCHHHHHH AVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVMPTAENVSNGLYPLSRYLYIYINKAP HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHCCEEEEEEEECCC GQPLEALTAAFLERALSPEGQKLVSHDGYLPLPPAMLNNTRKTLGFTD CCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHCCCHHHCCCCC >Mature Secondary Structure MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALVLPVTLASPSITVSPSVPMPVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEECCCCCCCCH NTLSGNLSSVGSDTLANLMSLWANDFNHHYPGVNLQIQAAGSSTAPAALAAGATQLGPMS HHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHCCCHHCCCCC RPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVHQDNPLNRLTLSQLDAIFSQNRRCGEP CCCCHHHHHHHHHHHCCCCCHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCH QKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFKRRVLCDGDFINNINELPGSASVVQ HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHEEEECCHHHHHHHHCCCHHHHHH AVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVMPTAENVSNGLYPLSRYLYIYINKAP HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHCCEEEEEEEECCC GQPLEALTAAFLERALSPEGQKLVSHDGYLPLPPAMLNNTRKTLGFTD CCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7741855 [H]