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The map label for this gene is manD [H]

Identifier: 153947379

GI number: 153947379

Start: 1121477

End: 1122643

Strand: Reverse

Name: manD [H]

Synonym: YpsIP31758_0936

Alternate gene names: 153947379

Gene position: 1122643-1121477 (Counterclockwise)

Preceding gene: 153947292

Following gene: 153948238

Centisome position: 23.77

GC content: 56.64

Gene sequence:

>1167_bases
ATGCGTACTGCCTATCTCGCTGATCGCACTTTTACTCCGCAAGGCATTGAAACCGGTGTCGCGGTTATCGTCGAGCAAGG
CGAGATTGTGGCAGTAACACGCGAGCTGCCAGCGGATGCAGAAATTGTGCATCTGACAGGGAAAACCCTGATCCCAGGTC
TGATCGACATTCATATTCATGGTCGCCAGGGGGCGGATGTCATGGATGCCTCTGCGGAGGCATTACGCACCATTGCCCGT
GCCCTACCCCAAACCGGGGTTGTTGCCTGGGTCGGCACCACCGTCAGTGCGCCGATACAGGATATCTTTGCGGCTCTGGC
GCAGGTGCGTGATTTTATTGCAGACCCGGATAACGCACGTGATACCCGCACCGCAACCCTGCTCGGCAGTTTTCTGGAGG
GGCCATATTTCACCGCGCCTTTCCGGGGTTCACACCCAGAAAAGTATCTGACGACACCAACACCACAAGAGCTGGAGCAA
TTACGGCATTCGGCGGGTAACACCTTGTTGCGTGCAGCTATCGCACCTGAGTCACCCGAGGCTTTGGCCGCGATCCGCTG
GCTGGTGAATCACGGGATCAAAACCTCTGTGGCGCACACTGCGGCTAATTTTGAGCAAGTGACGGTGGCCTATCAGCAAG
GTGCGGATTGCGGCGTACATTTGTATAACGGCATGTCAGGGTTGCATCACCGTGAACCGGGCTGCTGTGGTGCCGTGTTG
TATCACGACATGCTGGCAGAGCTGATTGCCGATGGCATTCATGTGCATCCGGTGATGATGAATCTGGCGTATCGCATGAA
AGGTTATCGCCGCATTGCACTGATCACCGACTGCATGCGCGCAGGGGGGCTGGGTGAGGGGCGTTATTTACTCGGCGCAC
AGCATATCACGGTACGTCAGGGGGAAGCGCGCACCGATGATGGTTCGCTGGCAGGCAGTACTTGTAGCTTGGATCAGGCG
CTGCGTAACATGATCCAACATGCGCAAGTCCCCGAGTGGGAAGCTGTACAAATGGCCAGCGCAGTACCCGCCGCTTATCT
GGGATTAGCGTCAACACTGGGTTCGATCCAGATGGGTGCGCAAGCCAGCATGGTGGTGATGGAGAGCGACTTTACCGTTG
CCGCAACCCTGATTAAAGGTGAATGGGCTTATCGCCACTCAGCCTAA

Upstream 100 bases:

>100_bases
TACTGATGGATATTGGCGCGTCCAGTGTACAGAACCTACGGGCTGAGCTGGACACCGCTCTGGTTACTGATGACGGCGAA
AACGAGGATGGGCTCTAATT

Downstream 100 bases:

>100_bases
GTGCCGTGCTGCTCACGGCCGGGATCCTCTGCCGATCGCTTCACTGACATAACGCCTTTTATGCTTATTTACACCTCATA
GATTTCAGAATGTGGTCAAC

Product: N-acetylgalactosamine-6-phosphate deacetylase

Products: NA

Alternate protein names: GlcNAc 6-P deacetylase [H]

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MRTAYLADRTFTPQGIETGVAVIVEQGEIVAVTRELPADAEIVHLTGKTLIPGLIDIHIHGRQGADVMDASAEALRTIAR
ALPQTGVVAWVGTTVSAPIQDIFAALAQVRDFIADPDNARDTRTATLLGSFLEGPYFTAPFRGSHPEKYLTTPTPQELEQ
LRHSAGNTLLRAAIAPESPEALAAIRWLVNHGIKTSVAHTAANFEQVTVAYQQGADCGVHLYNGMSGLHHREPGCCGAVL
YHDMLAELIADGIHVHPVMMNLAYRMKGYRRIALITDCMRAGGLGEGRYLLGAQHITVRQGEARTDDGSLAGSTCSLDQA
LRNMIQHAQVPEWEAVQMASAVPAAYLGLASTLGSIQMGAQASMVVMESDFTVAATLIKGEWAYRHSA

Sequences:

>Translated_388_residues
MRTAYLADRTFTPQGIETGVAVIVEQGEIVAVTRELPADAEIVHLTGKTLIPGLIDIHIHGRQGADVMDASAEALRTIAR
ALPQTGVVAWVGTTVSAPIQDIFAALAQVRDFIADPDNARDTRTATLLGSFLEGPYFTAPFRGSHPEKYLTTPTPQELEQ
LRHSAGNTLLRAAIAPESPEALAAIRWLVNHGIKTSVAHTAANFEQVTVAYQQGADCGVHLYNGMSGLHHREPGCCGAVL
YHDMLAELIADGIHVHPVMMNLAYRMKGYRRIALITDCMRAGGLGEGRYLLGAQHITVRQGEARTDDGSLAGSTCSLDQA
LRNMIQHAQVPEWEAVQMASAVPAAYLGLASTLGSIQMGAQASMVVMESDFTVAATLIKGEWAYRHSA
>Mature_388_residues
MRTAYLADRTFTPQGIETGVAVIVEQGEIVAVTRELPADAEIVHLTGKTLIPGLIDIHIHGRQGADVMDASAEALRTIAR
ALPQTGVVAWVGTTVSAPIQDIFAALAQVRDFIADPDNARDTRTATLLGSFLEGPYFTAPFRGSHPEKYLTTPTPQELEQ
LRHSAGNTLLRAAIAPESPEALAAIRWLVNHGIKTSVAHTAANFEQVTVAYQQGADCGVHLYNGMSGLHHREPGCCGAVL
YHDMLAELIADGIHVHPVMMNLAYRMKGYRRIALITDCMRAGGLGEGRYLLGAQHITVRQGEARTDDGSLAGSTCSLDQA
LRNMIQHAQVPEWEAVQMASAVPAAYLGLASTLGSIQMGAQASMVVMESDFTVAATLIKGEWAYRHSA

Specific function: N-acetylglucosamine utilization. [C]

COG id: COG1820

COG function: function code G; N-acetylglucosamine-6-phosphate deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nagA family [H]

Homologues:

Organism=Homo sapiens, GI21361513, Length=385, Percent_Identity=29.3506493506493, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI224922791, Length=391, Percent_Identity=28.9002557544757, Blast_Score=136, Evalue=4e-32,
Organism=Escherichia coli, GI1786892, Length=381, Percent_Identity=28.0839895013123, Blast_Score=160, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17553768, Length=363, Percent_Identity=30.8539944903581, Blast_Score=155, Evalue=4e-38,
Organism=Drosophila melanogaster, GI19920392, Length=353, Percent_Identity=29.7450424929178, Blast_Score=140, Evalue=1e-33,
Organism=Drosophila melanogaster, GI281361140, Length=366, Percent_Identity=28.9617486338798, Blast_Score=137, Evalue=9e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR003764
- InterPro:   IPR011059 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: =3.5.1.25 [H]

Molecular weight: Translated: 41624; Mature: 41624

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTAYLADRTFTPQGIETGVAVIVEQGEIVAVTRELPADAEIVHLTGKTLIPGLIDIHIH
CCCEEECCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCEEEEECCCCCCCCEEEEEEE
GRQGADVMDASAEALRTIARALPQTGVVAWVGTTVSAPIQDIFAALAQVRDFIADPDNAR
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCC
DTRTATLLGSFLEGPYFTAPFRGSHPEKYLTTPTPQELEQLRHSAGNTLLRAAIAPESPE
HHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHH
ALAAIRWLVNHGIKTSVAHTAANFEQVTVAYQQGADCGVHLYNGMSGLHHREPGCCGAVL
HHHHHHHHHHCCCHHHHHHHHCCHHHEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHH
YHDMLAELIADGIHVHPVMMNLAYRMKGYRRIALITDCMRAGGLGEGRYLLGAQHITVRQ
HHHHHHHHHHCCCEEHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCCCEEEECEEEEEEC
GEARTDDGSLAGSTCSLDQALRNMIQHAQVPEWEAVQMASAVPAAYLGLASTLGSIQMGA
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QASMVVMESDFTVAATLIKGEWAYRHSA
CEEEEEEECCCEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MRTAYLADRTFTPQGIETGVAVIVEQGEIVAVTRELPADAEIVHLTGKTLIPGLIDIHIH
CCCEEECCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCEEEEECCCCCCCCEEEEEEE
GRQGADVMDASAEALRTIARALPQTGVVAWVGTTVSAPIQDIFAALAQVRDFIADPDNAR
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCC
DTRTATLLGSFLEGPYFTAPFRGSHPEKYLTTPTPQELEQLRHSAGNTLLRAAIAPESPE
HHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHH
ALAAIRWLVNHGIKTSVAHTAANFEQVTVAYQQGADCGVHLYNGMSGLHHREPGCCGAVL
HHHHHHHHHHCCCHHHHHHHHCCHHHEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHH
YHDMLAELIADGIHVHPVMMNLAYRMKGYRRIALITDCMRAGGLGEGRYLLGAQHITVRQ
HHHHHHHHHHCCCEEHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCCCEEEECEEEEEEC
GEARTDDGSLAGSTCSLDQALRNMIQHAQVPEWEAVQMASAVPAAYLGLASTLGSIQMGA
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QASMVVMESDFTVAATLIKGEWAYRHSA
CEEEEEEECCCEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969210 [H]