| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947358
Identifier: 153947358
GI number: 153947358
Start: 1390257
End: 1392677
Strand: Direct
Name: 153947358
Synonym: YpsIP31758_1181
Alternate gene names: NA
Gene position: 1390257-1392677 (Clockwise)
Preceding gene: 153949041
Following gene: 153947813
Centisome position: 29.43
GC content: 38.91
Gene sequence:
>2421_bases ATGAGATATAATCGTAACCATATGCTAACGTTAATGTTCTCTTTATTAATTTTTGATGCCTATGCAAATGAACCCAAAGT CTGCTTTTATATGGATGATGACTATAATGGTGAGTCTCTCTGCGCTGCTCAAGGGAACTCAGTTGCCAATATTCCGGATA AATGGAATGATCGTATATCGTCAATTGCTATTCCTCATGGTTTAGTTGTCACTGTCTATAATGATATAAACTTCGCGGGT GATTCTCGATCGTTTGAAGCTGATGTGGATTTGGTCTTAGATAAAAATCTGATATATTTAAATGATAATATAAGTTCATT TAAAATAAAAAAGGCAGTTTGTTTTTATGGCGAAAGTAACTTTACAGGTGACTCGGTATGCTTATCTGGTGATGAGCAAT TTGACTTGTATAGCGGTAGCTATCCTGAAAGGAAACAATCTCATTTGGTAAATCCATTGAATGATGACGTATATTCAATA AAAATCCCTCCAGGAATGCAAACTACAGTCTACGAGGACGATAACTATAATGGTAAACACTTTGTTTTGACAGAGGATTA CACATCTGATGATTTATTGATTATAAGAATGAATAATAAAATCAGTAGTATGCGTGTTTCTCAAGATGAGGATTTCATTT GTGATCGTTTCTGTTCTATAAAAAAATCAATTAAATTTAAAATACAAAAAAGTTTTGGATCCTATTGGCTTGATCCACGA ATAAAACACAGGGATATATTAGTCGACTTTCAGTTGTCTGACACCGATGATTATTCAATAAAATTTTTCGATGAGGGTCT TATAAAAGTTAAAGATTATAAATTATTTTTCTTTGATGGTAATAAAAAATATGGTGAGGGTTTTTTATTTAATTTAGATA ACAAAAGCAGTAATTTGTCATTTTTATTGCGTTTTAATGGTGGTTTTTTTCAAATTCAATTTGTTGAATCATTAAATAAT GAAATTGTTTATTCTTCTCCTTTGATTGGAACATTATTTGATGATGTTAACTCAAATGTTATTTTTGATATTAATAATGT AGATGCAAATAGCCCAATAGTTATCGATAAAATGGTATTAACCGTTGGTAAGGAGCATAACCGGGCTGAACGTAGTACTC TGGGTCTAGCGACTTGTTGGACAATACCCATACTGAGTATTTATAACTATATTGTTCAGGGGCATTGTAATCAGGCAGAT AAGTTTGTCCATAATGCTGCCGATTTTTTTGGTAGCCCGGCAGATAAAATATTGCAAATATTTGGTTCCTCTTTACCCTT GCCTAAAAAAAATAGCAATGAAACATTAGATGACGAATCTGCATTAATTAATTTTATGTCTGATGTGAAAGGGACGTTAA CCTATATTACGACCAATATGGGCGAACACGCATTAACCGTACCGGCAACGGCACTCGCGTGCAAAGCCTCAATGCGAGAG AAAATCCTGCCTCATCTGCGTAGCCGACGTGATCTTGCGCCAGGGTGTATCGATTGGACTTTGAGTATTTTAACCGATTT TACCTTGTTGTTTGGTGCCAGCATTGAGTATTGGAATAGCAAAAATTTTGGGCGAGTAATCGAAAATATTGTTCGCGAAG GGGAGATTGGTTCTGCTGTGGCAGATGTGGAGACGGCATCACGTTTAGTCGAGTCAGTTCAGGCCCATGTGGCTGAAGCG ACAGAGGTTGCAGATATCATTCATCTCAAAACGGCATTCGATTTTTCCCAGCTAAGTTATGTTAATTATTTACGCCATAC TGAAGAGGAAGTGATACCGCCACAAAGCGCGCAGACGCTACCCTTAGGGCGTTATGAACTGGCACTGGTAGATTACCATT TTATCGAGACGGTACCCAGGATTCGTCAGGATGGCCGTTGGGTAGAACGCCCAGATCTGCATTTTGATATTGAAGTGATT AGCGGGGTTCCCGAAGAGACTAATGCGAGCCGGCAAGTGCTTTTGCCGATTATCGAAGCGTGGCAGCATAGCTATCGTCA ACAAGAATTACTTTTTCAATCCTCTGAAATTCCTCCAGAAAGTGCCTTGGCTCGGAATGAAATTGAGCCGTTGTTAGAGG CTTCACGACTGACTAGCGAAGTTGCAACCAGTTGGTTAAGGACTAGCCGTGATGATTTTGTTTACGTCGTAGTCCGTTTG GAGGGCGAGGTTATTAGCCTCACCATGGCAGTCGATATCAATACTAATGATGTGGGGGTTGCCGGGTCATTAACCAACCC AGATTATGTACTGACACCTAATGCGGAAGGGGCCGTCAGAGGCGCGGGTACGGCGGCGACCCGAGCATTGGCTGACCACT TTAAACGCAAAGGGAAAATATCCTTGGTCTCTTCTGTGATCAGTCAGCCATCCGCGATTGTGAAGAAAAAAGTGGGCTTT AGATTTATTGAAGAGCTCTAA
Upstream 100 bases:
>100_bases AAATTATTTATTCTAAGGTAAAGTTTTTAGGTCAGGAAATAACAATCTCTTATTTTTAAAATAATGGATTATTAATAATA GTTTAAAAGGTATATATATT
Downstream 100 bases:
>100_bases GAGGACCTAGCACTAACTAATTGAAAAAAAGATAAATTAAATATTATTATGTGCGCTTCCTCAGTGACATTAGGTGTGGT TAGGTTTTTACACAAAATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 806; Mature: 806
Protein sequence:
>806_residues MRYNRNHMLTLMFSLLIFDAYANEPKVCFYMDDDYNGESLCAAQGNSVANIPDKWNDRISSIAIPHGLVVTVYNDINFAG DSRSFEADVDLVLDKNLIYLNDNISSFKIKKAVCFYGESNFTGDSVCLSGDEQFDLYSGSYPERKQSHLVNPLNDDVYSI KIPPGMQTTVYEDDNYNGKHFVLTEDYTSDDLLIIRMNNKISSMRVSQDEDFICDRFCSIKKSIKFKIQKSFGSYWLDPR IKHRDILVDFQLSDTDDYSIKFFDEGLIKVKDYKLFFFDGNKKYGEGFLFNLDNKSSNLSFLLRFNGGFFQIQFVESLNN EIVYSSPLIGTLFDDVNSNVIFDINNVDANSPIVIDKMVLTVGKEHNRAERSTLGLATCWTIPILSIYNYIVQGHCNQAD KFVHNAADFFGSPADKILQIFGSSLPLPKKNSNETLDDESALINFMSDVKGTLTYITTNMGEHALTVPATALACKASMRE KILPHLRSRRDLAPGCIDWTLSILTDFTLLFGASIEYWNSKNFGRVIENIVREGEIGSAVADVETASRLVESVQAHVAEA TEVADIIHLKTAFDFSQLSYVNYLRHTEEEVIPPQSAQTLPLGRYELALVDYHFIETVPRIRQDGRWVERPDLHFDIEVI SGVPEETNASRQVLLPIIEAWQHSYRQQELLFQSSEIPPESALARNEIEPLLEASRLTSEVATSWLRTSRDDFVYVVVRL EGEVISLTMAVDINTNDVGVAGSLTNPDYVLTPNAEGAVRGAGTAATRALADHFKRKGKISLVSSVISQPSAIVKKKVGF RFIEEL
Sequences:
>Translated_806_residues MRYNRNHMLTLMFSLLIFDAYANEPKVCFYMDDDYNGESLCAAQGNSVANIPDKWNDRISSIAIPHGLVVTVYNDINFAG DSRSFEADVDLVLDKNLIYLNDNISSFKIKKAVCFYGESNFTGDSVCLSGDEQFDLYSGSYPERKQSHLVNPLNDDVYSI KIPPGMQTTVYEDDNYNGKHFVLTEDYTSDDLLIIRMNNKISSMRVSQDEDFICDRFCSIKKSIKFKIQKSFGSYWLDPR IKHRDILVDFQLSDTDDYSIKFFDEGLIKVKDYKLFFFDGNKKYGEGFLFNLDNKSSNLSFLLRFNGGFFQIQFVESLNN EIVYSSPLIGTLFDDVNSNVIFDINNVDANSPIVIDKMVLTVGKEHNRAERSTLGLATCWTIPILSIYNYIVQGHCNQAD KFVHNAADFFGSPADKILQIFGSSLPLPKKNSNETLDDESALINFMSDVKGTLTYITTNMGEHALTVPATALACKASMRE KILPHLRSRRDLAPGCIDWTLSILTDFTLLFGASIEYWNSKNFGRVIENIVREGEIGSAVADVETASRLVESVQAHVAEA TEVADIIHLKTAFDFSQLSYVNYLRHTEEEVIPPQSAQTLPLGRYELALVDYHFIETVPRIRQDGRWVERPDLHFDIEVI SGVPEETNASRQVLLPIIEAWQHSYRQQELLFQSSEIPPESALARNEIEPLLEASRLTSEVATSWLRTSRDDFVYVVVRL EGEVISLTMAVDINTNDVGVAGSLTNPDYVLTPNAEGAVRGAGTAATRALADHFKRKGKISLVSSVISQPSAIVKKKVGF RFIEEL >Mature_806_residues MRYNRNHMLTLMFSLLIFDAYANEPKVCFYMDDDYNGESLCAAQGNSVANIPDKWNDRISSIAIPHGLVVTVYNDINFAG DSRSFEADVDLVLDKNLIYLNDNISSFKIKKAVCFYGESNFTGDSVCLSGDEQFDLYSGSYPERKQSHLVNPLNDDVYSI KIPPGMQTTVYEDDNYNGKHFVLTEDYTSDDLLIIRMNNKISSMRVSQDEDFICDRFCSIKKSIKFKIQKSFGSYWLDPR IKHRDILVDFQLSDTDDYSIKFFDEGLIKVKDYKLFFFDGNKKYGEGFLFNLDNKSSNLSFLLRFNGGFFQIQFVESLNN EIVYSSPLIGTLFDDVNSNVIFDINNVDANSPIVIDKMVLTVGKEHNRAERSTLGLATCWTIPILSIYNYIVQGHCNQAD KFVHNAADFFGSPADKILQIFGSSLPLPKKNSNETLDDESALINFMSDVKGTLTYITTNMGEHALTVPATALACKASMRE KILPHLRSRRDLAPGCIDWTLSILTDFTLLFGASIEYWNSKNFGRVIENIVREGEIGSAVADVETASRLVESVQAHVAEA TEVADIIHLKTAFDFSQLSYVNYLRHTEEEVIPPQSAQTLPLGRYELALVDYHFIETVPRIRQDGRWVERPDLHFDIEVI SGVPEETNASRQVLLPIIEAWQHSYRQQELLFQSSEIPPESALARNEIEPLLEASRLTSEVATSWLRTSRDDFVYVVVRL EGEVISLTMAVDINTNDVGVAGSLTNPDYVLTPNAEGAVRGAGTAATRALADHFKRKGKISLVSSVISQPSAIVKKKVGF RFIEEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90824; Mature: 90824
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS50915 CRYSTALLIN_BETA_GAMMA L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYNRNHMLTLMFSLLIFDAYANEPKVCFYMDDDYNGESLCAAQGNSVANIPDKWNDRIS CCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHH SIAIPHGLVVTVYNDINFAGDSRSFEADVDLVLDKNLIYLNDNISSFKIKKAVCFYGESN HEECCCCEEEEEEECCEECCCCCCCCCCEEEEEECCEEEEECCCCCEEEEEEEEEECCCC FTGDSVCLSGDEQFDLYSGSYPERKQSHLVNPLNDDVYSIKIPPGMQTTVYEDDNYNGKH CCCCEEEECCCCCEEECCCCCCCHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCCCE FVLTEDYTSDDLLIIRMNNKISSMRVSQDEDFICDRFCSIKKSIKFKIQKSFGSYWLDPR EEEECCCCCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHEEEEEECCCCEECCCC IKHRDILVDFQLSDTDDYSIKFFDEGLIKVKDYKLFFFDGNKKYGEGFLFNLDNKSSNLS CCCCEEEEEEEECCCCCCEEEEECCCCEEEEEEEEEEEECCCEECCEEEEEECCCCCCEE FLLRFNGGFFQIQFVESLNNEIVYSSPLIGTLFDDVNSNVIFDINNVDANSPIVIDKMVL EEEEECCCEEEEEEHHHCCCCEEECCCCHHHHHHCCCCCEEEEECCCCCCCCEEEEHHHH TVGKEHNRAERSTLGLATCWTIPILSIYNYIVQGHCNQADKFVHNAADFFGSPADKILQI HHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH FGSSLPLPKKNSNETLDDESALINFMSDVKGTLTYITTNMGEHALTVPATALACKASMRE HCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEECCHHHHHHHHHHHH KILPHLRSRRDLAPGCIDWTLSILTDFTLLFGASIEYWNSKNFGRVIENIVREGEIGSAV HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCCHH ADVETASRLVESVQAHVAEATEVADIIHLKTAFDFSQLSYVNYLRHTEEEVIPPQSAQTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHCCCCCCCCCC PLGRYELALVDYHFIETVPRIRQDGRWVERPDLHFDIEVISGVPEETNASRQVLLPIIEA CCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCEEEEHEECCCCCCCCCCHHHHHHHHHH WQHSYRQQELLFQSSEIPPESALARNEIEPLLEASRLTSEVATSWLRTSRDDFVYVVVRL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE EGEVISLTMAVDINTNDVGVAGSLTNPDYVLTPNAEGAVRGAGTAATRALADHFKRKGKI CCCEEEEEEEEEECCCCCEEEECCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCH SLVSSVISQPSAIVKKKVGFRFIEEL HHHHHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MRYNRNHMLTLMFSLLIFDAYANEPKVCFYMDDDYNGESLCAAQGNSVANIPDKWNDRIS CCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHH SIAIPHGLVVTVYNDINFAGDSRSFEADVDLVLDKNLIYLNDNISSFKIKKAVCFYGESN HEECCCCEEEEEEECCEECCCCCCCCCCEEEEEECCEEEEECCCCCEEEEEEEEEECCCC FTGDSVCLSGDEQFDLYSGSYPERKQSHLVNPLNDDVYSIKIPPGMQTTVYEDDNYNGKH CCCCEEEECCCCCEEECCCCCCCHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCCCE FVLTEDYTSDDLLIIRMNNKISSMRVSQDEDFICDRFCSIKKSIKFKIQKSFGSYWLDPR EEEECCCCCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHEEEEEECCCCEECCCC IKHRDILVDFQLSDTDDYSIKFFDEGLIKVKDYKLFFFDGNKKYGEGFLFNLDNKSSNLS CCCCEEEEEEEECCCCCCEEEEECCCCEEEEEEEEEEEECCCEECCEEEEEECCCCCCEE FLLRFNGGFFQIQFVESLNNEIVYSSPLIGTLFDDVNSNVIFDINNVDANSPIVIDKMVL EEEEECCCEEEEEEHHHCCCCEEECCCCHHHHHHCCCCCEEEEECCCCCCCCEEEEHHHH TVGKEHNRAERSTLGLATCWTIPILSIYNYIVQGHCNQADKFVHNAADFFGSPADKILQI HHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH FGSSLPLPKKNSNETLDDESALINFMSDVKGTLTYITTNMGEHALTVPATALACKASMRE HCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEECCHHHHHHHHHHHH KILPHLRSRRDLAPGCIDWTLSILTDFTLLFGASIEYWNSKNFGRVIENIVREGEIGSAV HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCCHH ADVETASRLVESVQAHVAEATEVADIIHLKTAFDFSQLSYVNYLRHTEEEVIPPQSAQTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHCCCCCCCCCC PLGRYELALVDYHFIETVPRIRQDGRWVERPDLHFDIEVISGVPEETNASRQVLLPIIEA CCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCEEEEHEECCCCCCCCCCHHHHHHHHHH WQHSYRQQELLFQSSEIPPESALARNEIEPLLEASRLTSEVATSWLRTSRDDFVYVVVRL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE EGEVISLTMAVDINTNDVGVAGSLTNPDYVLTPNAEGAVRGAGTAATRALADHFKRKGKI CCCEEEEEEEEEECCCCCEEEECCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCH SLVSSVISQPSAIVKKKVGFRFIEEL HHHHHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA