| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947336
Identifier: 153947336
GI number: 153947336
Start: 4523448
End: 4523837
Strand: Reverse
Name: 153947336
Synonym: YpsIP31758_4016
Alternate gene names: NA
Gene position: 4523837-4523448 (Counterclockwise)
Preceding gene: 153946921
Following gene: 153949606
Centisome position: 95.78
GC content: 40.0
Gene sequence:
>390_bases ATGACCAACGACACCGCTTTAGATTACGTGGACAGGGCACTGCGTCTGGCTCAGAAACGCCACCATCATATTCAATATAA CGTCATTGGTGGTAAGACGCTTGAACCCATGTATAACTCCATCGTTCAGCAGTTGATTTATCTGCACAAGGTGATTACCA GCGAGGAAAAAGATAAAACAAAGCTTTGGAAACTAACATTCGGCATGTATGCAACAAAAGAATTCGAAGCAACAGATCCT ATTTTTGAAGATCGGCTAGGTGATGCTTTTTATATTGCTTCACAAATCAGAAAAGGGCTAAAAGTAAAGTTACCTAACCA AGTAGATCCCAATTTTCAAGACAAGCAAAAAAGACTCAAAGCAGCTTACCCTGATGATTTTGACGTCTAA
Upstream 100 bases:
>100_bases CCAGAACAATTAAGCCGTATATAGTGATTAGATTAATTCCAGACTGAAGGCGGCGGCATACAATGGTTCAGTACCAATAA AGACGTATGGAGTCCGAAAA
Downstream 100 bases:
>100_bases TTATTAAAAGCCTCAGAAGAGGCTTGAGGTTATTGACAAAGTGCCCGTAACGGAGTGAACAGGCAGATCGCATCATCGGG GTTTGTCAGCAGTCAAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MTNDTALDYVDRALRLAQKRHHHIQYNVIGGKTLEPMYNSIVQQLIYLHKVITSEEKDKTKLWKLTFGMYATKEFEATDP IFEDRLGDAFYIASQIRKGLKVKLPNQVDPNFQDKQKRLKAAYPDDFDV
Sequences:
>Translated_129_residues MTNDTALDYVDRALRLAQKRHHHIQYNVIGGKTLEPMYNSIVQQLIYLHKVITSEEKDKTKLWKLTFGMYATKEFEATDP IFEDRLGDAFYIASQIRKGLKVKLPNQVDPNFQDKQKRLKAAYPDDFDV >Mature_128_residues TNDTALDYVDRALRLAQKRHHHIQYNVIGGKTLEPMYNSIVQQLIYLHKVITSEEKDKTKLWKLTFGMYATKEFEATDPI FEDRLGDAFYIASQIRKGLKVKLPNQVDPNFQDKQKRLKAAYPDDFDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15092; Mature: 14961
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNDTALDYVDRALRLAQKRHHHIQYNVIGGKTLEPMYNSIVQQLIYLHKVITSEEKDKT CCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH KLWKLTFGMYATKEFEATDPIFEDRLGDAFYIASQIRKGLKVKLPNQVDPNFQDKQKRLK HHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHH AAYPDDFDV HCCCCCCCC >Mature Secondary Structure TNDTALDYVDRALRLAQKRHHHIQYNVIGGKTLEPMYNSIVQQLIYLHKVITSEEKDKT CCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH KLWKLTFGMYATKEFEATDPIFEDRLGDAFYIASQIRKGLKVKLPNQVDPNFQDKQKRLK HHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHH AAYPDDFDV HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA