| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947290
Identifier: 153947290
GI number: 153947290
Start: 2414165
End: 2415319
Strand: Reverse
Name: 153947290
Synonym: YpsIP31758_2102
Alternate gene names: NA
Gene position: 2415319-2414165 (Counterclockwise)
Preceding gene: 153947735
Following gene: 153947459
Centisome position: 51.14
GC content: 47.71
Gene sequence:
>1155_bases ATGATTTACCTCGCGGCCATCTGGCTGGGCATCTTGTTGTTTAAGCTGATTTTTACGCTACGAATGATGAAGAGAGGGAA GCAGGCAGGGTGTGGCGTACCACAAGCCACCGCCACGATATTGCAACCTGTGTTGAGCGGTGATCCACAATTGGCAACCG TGCTGGAGGCAAACGTCGTTGCACTAAAACAGGCACGTTTTTTTTGGCTTATTGACGATGATGATACGGTGGCAAGAGAG ATAGCCATCAGTATTCAGTCGCGTTATCCCGACAGGGAAATTAAGGCAAGCTATTTCCCCCCAGCGCCTGAAGGGGTTAA TCCTAAAGTTTTCAAGCTCGAACAGGCCTGGCGGGAAGTGGAGAGTGACATCTTATTGGTATTGGACGACGATGCGTTTT TGTCAGCAGAGTCTTTCGGGACGCTATTGAACCAGATTGAAGAGGGCGCATTAGTGACCGCGCTTCCTTATTATTGTGCC GATAGTAATGGGTACTCCCGGCTATTGGCGCAATTCGTTAATGATAATTCCGGTTTCACCTACCTGCCCTTGTTGCCGTT TTCACCCCCCTTAACTATCAATGGGATGTGTTATGCGATATCCGTCAATACGTTGGCTCAAGTGGGGGGCTTTGCCGCTA TTCTACACGACCTGGCCGATGATCTGGCGTTGGCAACCCTGCTCAGACAACATCATATTCGTCTAATACAATCCACCGCC CCAGTAAGGGTTCAAACCAGTCTTTCTTCTGGCAAAAAGTATATACAACAAATGCATCGTTGGTTTTTGTTTGCCACGCT ACTGTTGCGTGAAAAAACAGTGCTGATAAAACTGATTATATTTCTGCTACAGGGGCTGCATCCTTTACTCATGTGGGCGA TGTTACTCACTGTTGGATGGGAGTGGGTGACGGCGGCCCACGGCATCACAGGGATTAACCTGGGCATTATTGCGGCTTGT TTGCTGATACGCCATGCTGCCCTCCGTCACGTTCAGCAGGCCATTGCCCCTGATATCCGTTCAAATCCTATTTTTTCGCT GTTATCTGAATTAATGCAACCGTTACATTTATTACATGCGTTGTGTAACCGAACGATTTACTGGCGTACGCGGCGCTATC GTGTTTTGAGTAATAAAAAGTTTAATTCACTATGA
Upstream 100 bases:
>100_bases CATTGGATGTGAGTGCGGCTATACACGATTTTGGTTCGCCATCCCGTTCCCTTTCTCAAGGGCTAGATGCCTTTATTCGC TGGTACAAGGAACAGAAATA
Downstream 100 bases:
>100_bases ATAAGATAACCTTACAGATAGCTTATATTACCGGCCGTAGCTCGCCAGAAAGCGGTAGTTTAAGCCCGGTTCAATTAGCC TTTATCAAAAAATTAGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MIYLAAIWLGILLFKLIFTLRMMKRGKQAGCGVPQATATILQPVLSGDPQLATVLEANVVALKQARFFWLIDDDDTVARE IAISIQSRYPDREIKASYFPPAPEGVNPKVFKLEQAWREVESDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCA DSNGYSRLLAQFVNDNSGFTYLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGWEWVTAAHGITGINLGIIAAC LLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHALCNRTIYWRTRRYRVLSNKKFNSL
Sequences:
>Translated_384_residues MIYLAAIWLGILLFKLIFTLRMMKRGKQAGCGVPQATATILQPVLSGDPQLATVLEANVVALKQARFFWLIDDDDTVARE IAISIQSRYPDREIKASYFPPAPEGVNPKVFKLEQAWREVESDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCA DSNGYSRLLAQFVNDNSGFTYLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGWEWVTAAHGITGINLGIIAAC LLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHALCNRTIYWRTRRYRVLSNKKFNSL >Mature_384_residues MIYLAAIWLGILLFKLIFTLRMMKRGKQAGCGVPQATATILQPVLSGDPQLATVLEANVVALKQARFFWLIDDDDTVARE IAISIQSRYPDREIKASYFPPAPEGVNPKVFKLEQAWREVESDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCA DSNGYSRLLAQFVNDNSGFTYLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGWEWVTAAHGITGINLGIIAAC LLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHALCNRTIYWRTRRYRVLSNKKFNSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4507811, Length=345, Percent_Identity=22.6086956521739, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI25147526, Length=356, Percent_Identity=21.6292134831461, Blast_Score=76, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43073; Mature: 43073
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYLAAIWLGILLFKLIFTLRMMKRGKQAGCGVPQATATILQPVLSGDPQLATVLEANVV CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH ALKQARFFWLIDDDDTVAREIAISIQSRYPDREIKASYFPPAPEGVNPKVFKLEQAWREV HEEECEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ESDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCADSNGYSRLLAQFVNDNSGFT CCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECHHHCCCCCCHHHHHHHHHCCCCCEE YLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA EEEECCCCCCCEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGW CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH EWVTAAHGITGINLGIIAACLLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LCNRTIYWRTRRYRVLSNKKFNSL HHCCEEEEEHHHHHHHCCCCCCCC >Mature Secondary Structure MIYLAAIWLGILLFKLIFTLRMMKRGKQAGCGVPQATATILQPVLSGDPQLATVLEANVV CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH ALKQARFFWLIDDDDTVAREIAISIQSRYPDREIKASYFPPAPEGVNPKVFKLEQAWREV HEEECEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ESDILLVLDDDAFLSAESFGTLLNQIEEGALVTALPYYCADSNGYSRLLAQFVNDNSGFT CCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEECHHHCCCCCCHHHHHHHHHCCCCCEE YLPLLPFSPPLTINGMCYAISVNTLAQVGGFAAILHDLADDLALATLLRQHHIRLIQSTA EEEECCCCCCCEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PVRVQTSLSSGKKYIQQMHRWFLFATLLLREKTVLIKLIIFLLQGLHPLLMWAMLLTVGW CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH EWVTAAHGITGINLGIIAACLLIRHAALRHVQQAIAPDIRSNPIFSLLSELMQPLHLLHA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LCNRTIYWRTRRYRVLSNKKFNSL HHCCEEEEEHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA