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The map label for this gene is yaeB [H]

Identifier: 153947268

GI number: 153947268

Start: 1242830

End: 1243537

Strand: Reverse

Name: yaeB [H]

Synonym: YpsIP31758_1039

Alternate gene names: 153947268

Gene position: 1243537-1242830 (Counterclockwise)

Preceding gene: 153948093

Following gene: 153947724

Centisome position: 26.33

GC content: 49.58

Gene sequence:

>708_bases
ATGAGTACATTCTCTTTTAATCAGATCGGCGTGATCCGTTCACCGTATAAAGAAAAGTTTGCGGTACCACGGCAACCCGG
TTTGGTTGAGGATGGTGGTGGCGAATTACAGTTGCTGGCACCTTACAACCAACCAGAAAGCGTACGCGGCTTATCTGACT
TCAGCCATTTATGGGTGATATTCGTTTTCCATCAGACGATGGAGGGTGGCTGGCGTCCAACTGTTCGCCCTCCCCGTCTG
GGGGGAAATACACGAATGGGCGTATTTGCGACCCGTTCAACTTTTCGTCCAAACCCGATAGGCATGTCGCTGATTGAGTT
GAAAGGCGTTCGTTGCCAAAACGGTGAGGTGATTCTGGTATTGGGCAGCCTGGATTTAGTTGATGGCACGCCTGTTATTG
ATATTAAACCTTATCTGCCTTTCGCTGAGAGCCAACCTCAGGCGCGCGCTGGTTTTGCGCAATCTGCACCAGATACAGAG
ATGCAAGTTTGCTTTTCTCCCGCCGCCGAGCAACAGTTAGCTCACCACCAGCAGCGTTATCCACATCTTCGCCGTTTTAT
CAGCCAAGTTTTAGCACAAGATCCACGCCCAGCTTACCGTAAAGACGATAATGAAAGCCGTGAATATGCCGTTTTATTAC
TGGAATTTAATGTGCGCTGGCGGGTTATTGGCCAGCAAACAGAAGTGTTATCACTCGACCCACGCTAA

Upstream 100 bases:

>100_bases
CAAATGCCGTCTTACTGCATGAATGTGAAATACAAAGTGGTGTCCCTGGCTGCTATCAACAAGCGGTGTGTCAGGGTTCA
GCACTGAACGTTTCATCTAA

Downstream 100 bases:

>100_bases
ATTTCACTCTGCTCTCTTTTGACAACCCGTGCTCACTGGTAAACTAGGCCACTTTTTACTTTTTGGCTGCCCCTAATTGC
AGTGCTAATGGAACAAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MSTFSFNQIGVIRSPYKEKFAVPRQPGLVEDGGGELQLLAPYNQPESVRGLSDFSHLWVIFVFHQTMEGGWRPTVRPPRL
GGNTRMGVFATRSTFRPNPIGMSLIELKGVRCQNGEVILVLGSLDLVDGTPVIDIKPYLPFAESQPQARAGFAQSAPDTE
MQVCFSPAAEQQLAHHQQRYPHLRRFISQVLAQDPRPAYRKDDNESREYAVLLLEFNVRWRVIGQQTEVLSLDPR

Sequences:

>Translated_235_residues
MSTFSFNQIGVIRSPYKEKFAVPRQPGLVEDGGGELQLLAPYNQPESVRGLSDFSHLWVIFVFHQTMEGGWRPTVRPPRL
GGNTRMGVFATRSTFRPNPIGMSLIELKGVRCQNGEVILVLGSLDLVDGTPVIDIKPYLPFAESQPQARAGFAQSAPDTE
MQVCFSPAAEQQLAHHQQRYPHLRRFISQVLAQDPRPAYRKDDNESREYAVLLLEFNVRWRVIGQQTEVLSLDPR
>Mature_234_residues
STFSFNQIGVIRSPYKEKFAVPRQPGLVEDGGGELQLLAPYNQPESVRGLSDFSHLWVIFVFHQTMEGGWRPTVRPPRLG
GNTRMGVFATRSTFRPNPIGMSLIELKGVRCQNGEVILVLGSLDLVDGTPVIDIKPYLPFAESQPQARAGFAQSAPDTEM
QVCFSPAAEQQLAHHQQRYPHLRRFISQVLAQDPRPAYRKDDNESREYAVLLLEFNVRWRVIGQQTEVLSLDPR

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=133, Percent_Identity=41.3533834586466, Blast_Score=102, Evalue=3e-22,
Organism=Escherichia coli, GI1786393, Length=235, Percent_Identity=71.063829787234, Blast_Score=350, Evalue=5e-98,
Organism=Drosophila melanogaster, GI24586408, Length=164, Percent_Identity=43.9024390243902, Blast_Score=114, Evalue=4e-26,
Organism=Drosophila melanogaster, GI45552503, Length=141, Percent_Identity=47.5177304964539, Blast_Score=112, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 26531; Mature: 26399

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS01318 UPF0066

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFSFNQIGVIRSPYKEKFAVPRQPGLVEDGGGELQLLAPYNQPESVRGLSDFSHLWVI
CCCCCCCCCCCCCCCHHHHCCCCCCCCEEECCCCCEEEEECCCCCHHHCCHHHHHHHHHH
FVFHQTMEGGWRPTVRPPRLGGNTRMGVFATRSTFRPNPIGMSLIELKGVRCQNGEVILV
EEEHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCEECCCCEEEE
LGSLDLVDGTPVIDIKPYLPFAESQPQARAGFAQSAPDTEMQVCFSPAAEQQLAHHQQRY
EECEEEECCCCEEEEECCCCCCCCCCHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHCC
PHLRRFISQVLAQDPRPAYRKDDNESREYAVLLLEFNVRWRVIGQQTEVLSLDPR
HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCEEEEECCCCEEEEECCC
>Mature Secondary Structure 
STFSFNQIGVIRSPYKEKFAVPRQPGLVEDGGGELQLLAPYNQPESVRGLSDFSHLWVI
CCCCCCCCCCCCCCHHHHCCCCCCCCEEECCCCCEEEEECCCCCHHHCCHHHHHHHHHH
FVFHQTMEGGWRPTVRPPRLGGNTRMGVFATRSTFRPNPIGMSLIELKGVRCQNGEVILV
EEEHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCEECCCCEEEE
LGSLDLVDGTPVIDIKPYLPFAESQPQARAGFAQSAPDTEMQVCFSPAAEQQLAHHQQRY
EECEEEECCCCEEEEECCCCCCCCCCHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHCC
PHLRRFISQVLAQDPRPAYRKDDNESREYAVLLLEFNVRWRVIGQQTEVLSLDPR
HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCEEEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1459951; 9278503 [H]