| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is malE1 [H]
Identifier: 153947199
GI number: 153947199
Start: 1096814
End: 1098049
Strand: Direct
Name: malE1 [H]
Synonym: YpsIP31758_0914
Alternate gene names: 153947199
Gene position: 1096814-1098049 (Clockwise)
Preceding gene: 153949166
Following gene: 153947736
Centisome position: 23.22
GC content: 47.65
Gene sequence:
>1236_bases ATGAAAATCAATAAAATCACTGCGCTTGTTTTAACCGCACTGGCAGTCACCCAGTTTGCTGGTTTCGCTGCCCACGCTGC TACACAGCAATTAACAGTTTGGGAAGACATCAAAAAATCTGCCGGTATTAAAGAGGCTATCGCTGATTTTGAAAAACAGC ATCAGGTTAAGGTCAATGTGCTGGAAATGCCTTACGCACAACAAATTGAAAAACTCCGCCTTGATGGCCCTGCAGGTATC GGCCCTGATGTGTTGGTGATTCCCAATGATCAGTTAGGTGGTGCGGTAGTGCAAGGTTTGCTGACACCGCTCAGCGTTGA TCCAACCATAGTCACTACTTTTACTAAACCTTCTATCGCTGCCTTCACCATGGATAATGCCCTCTACGGTTTACCGAAAG CCGTGGAAACGCTGGTGATGATCTACAACAAAGACATGCTGCCAACGCCGTTAGCTACCTTGGATGAGTACGCCGCATTC TCTAAGAAACAACGCGCAGAAAATAAATATGGTCTGTTGGCGAAGTTCGATCAGATCTATTACAGCTGGGGAGCGATTGA GCCAATGGGCGGTTACATCTTTGGTAAAGATGCTAACGGTAGCTTGAAGGCTAACGATATCGGGCTAAATACGCCAGGGG CTGTTGAGGCCGTAACCTATTTGAAAACATTCTATGCTAACGGTCTGTTTCCAATTGGCACCATCGGTGATAACGGCTTG AATGCTATTGACTCATTATTCACTGAGAAAAAAGCGGCTGCGGTAATTAACGGGCCATGGGCATTCCAACCGTATGAAGC CGCTGGTATTAACTTTGGTGTGTCACCACTGCCAGCATTGCCGAACGGCAAAGATATGAGCTCCTTCCTCGGTGTGAAAG GGTATGTCGTTTCTACCTGGAGCAAAGATAAGGCACTCGCCCAGCAGTTCATCGAATTTATTAACCAACCGCAATACGTG AAAATCCGCTATCAGGTCACCAAAGAGATCCCCGCGTTGACGGCCATGATTGACGATCCATTGATTAAAAATGATGAAAA AGCCAGTGCGGTAGCCATTCAGGCAAGCCGAGCCTCTGCGATGCCTGGTATTCCAGAAATGGGCGAAGTGTGGGGACCTG CGAACTCAGCATTGGAGCTAAGCGTAACGGGCAAACAGGAGCCTAAAGTCGCTCTCGATAACGCCGTTAAGCAGATCAAT ATGCAAATCGAGGCCATGCAGGCCAGTAATCAGTAA
Upstream 100 bases:
>100_bases TGTTCTGCAGATGGCGTAGATGTGGTGTTTGTCATTTTGTATTTGTATTTAATCCCGAGCGTTAAACACAATAATGTTAT ACCTTCACCCGAGGCTAATA
Downstream 100 bases:
>100_bases TCAGACTATTTAACAGGTCAGTATGAATTTAGGTGGTGTTCAATTCCCCCACGTGCCGTTGGTATGCGATGGTTTTTGTG CACCACCTGTGTTTCAAACT
Product: maltose/maltodextrin ABC transporter periplasmic protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MKINKITALVLTALAVTQFAGFAAHAATQQLTVWEDIKKSAGIKEAIADFEKQHQVKVNVLEMPYAQQIEKLRLDGPAGI GPDVLVIPNDQLGGAVVQGLLTPLSVDPTIVTTFTKPSIAAFTMDNALYGLPKAVETLVMIYNKDMLPTPLATLDEYAAF SKKQRAENKYGLLAKFDQIYYSWGAIEPMGGYIFGKDANGSLKANDIGLNTPGAVEAVTYLKTFYANGLFPIGTIGDNGL NAIDSLFTEKKAAAVINGPWAFQPYEAAGINFGVSPLPALPNGKDMSSFLGVKGYVVSTWSKDKALAQQFIEFINQPQYV KIRYQVTKEIPALTAMIDDPLIKNDEKASAVAIQASRASAMPGIPEMGEVWGPANSALELSVTGKQEPKVALDNAVKQIN MQIEAMQASNQ
Sequences:
>Translated_411_residues MKINKITALVLTALAVTQFAGFAAHAATQQLTVWEDIKKSAGIKEAIADFEKQHQVKVNVLEMPYAQQIEKLRLDGPAGI GPDVLVIPNDQLGGAVVQGLLTPLSVDPTIVTTFTKPSIAAFTMDNALYGLPKAVETLVMIYNKDMLPTPLATLDEYAAF SKKQRAENKYGLLAKFDQIYYSWGAIEPMGGYIFGKDANGSLKANDIGLNTPGAVEAVTYLKTFYANGLFPIGTIGDNGL NAIDSLFTEKKAAAVINGPWAFQPYEAAGINFGVSPLPALPNGKDMSSFLGVKGYVVSTWSKDKALAQQFIEFINQPQYV KIRYQVTKEIPALTAMIDDPLIKNDEKASAVAIQASRASAMPGIPEMGEVWGPANSALELSVTGKQEPKVALDNAVKQIN MQIEAMQASNQ >Mature_411_residues MKINKITALVLTALAVTQFAGFAAHAATQQLTVWEDIKKSAGIKEAIADFEKQHQVKVNVLEMPYAQQIEKLRLDGPAGI GPDVLVIPNDQLGGAVVQGLLTPLSVDPTIVTTFTKPSIAAFTMDNALYGLPKAVETLVMIYNKDMLPTPLATLDEYAAF SKKQRAENKYGLLAKFDQIYYSWGAIEPMGGYIFGKDANGSLKANDIGLNTPGAVEAVTYLKTFYANGLFPIGTIGDNGL NAIDSLFTEKKAAAVINGPWAFQPYEAAGINFGVSPLPALPNGKDMSSFLGVKGYVVSTWSKDKALAQQFIEFINQPQYV KIRYQVTKEIPALTAMIDDPLIKNDEKASAVAIQASRASAMPGIPEMGEVWGPANSALELSVTGKQEPKVALDNAVKQIN MQIEAMQASNQ
Specific function: Binding protein for cyclodextrin; involved in its cellular uptake. Interacts with all natural cyclodextrins:alpha, beta and gamma [H]
COG id: COG2182
COG function: function code G; Maltose-binding periplasmic proteins/domains
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790466, Length=405, Percent_Identity=29.6296296296296, Blast_Score=145, Evalue=3e-36,
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006060 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 44250; Mature: 44250
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINKITALVLTALAVTQFAGFAAHAATQQLTVWEDIKKSAGIKEAIADFEKQHQVKVNV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEE LEMPYAQQIEKLRLDGPAGIGPDVLVIPNDQLGGAVVQGLLTPLSVDPTIVTTFTKPSIA ECCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCEEEEEECCCCEE AFTMDNALYGLPKAVETLVMIYNKDMLPTPLATLDEYAAFSKKQRAENKYGLLAKFDQIY EEEECCHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH YSWGAIEPMGGYIFGKDANGSLKANDIGLNTPGAVEAVTYLKTFYANGLFPIGTIGDNGL HHCCCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCHH NAIDSLFTEKKAAAVINGPWAFQPYEAAGINFGVSPLPALPNGKDMSSFLGVKGYVVSTW HHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECC SKDKALAQQFIEFINQPQYVKIRYQVTKEIPALTAMIDDPLIKNDEKASAVAIQASRASA CCHHHHHHHHHHHHCCCCEEEEEEEECHHCHHHHHHHCCCCCCCCCCCCEEEEEEHHCCC MPGIPEMGEVWGPANSALELSVTGKQEPKVALDNAVKQINMQIEAMQASNQ CCCCCCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHEEEEECCCCC >Mature Secondary Structure MKINKITALVLTALAVTQFAGFAAHAATQQLTVWEDIKKSAGIKEAIADFEKQHQVKVNV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEE LEMPYAQQIEKLRLDGPAGIGPDVLVIPNDQLGGAVVQGLLTPLSVDPTIVTTFTKPSIA ECCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCEEEEEECCCCEE AFTMDNALYGLPKAVETLVMIYNKDMLPTPLATLDEYAAFSKKQRAENKYGLLAKFDQIY EEEECCHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH YSWGAIEPMGGYIFGKDANGSLKANDIGLNTPGAVEAVTYLKTFYANGLFPIGTIGDNGL HHCCCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCHH NAIDSLFTEKKAAAVINGPWAFQPYEAAGINFGVSPLPALPNGKDMSSFLGVKGYVVSTW HHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEECC SKDKALAQQFIEFINQPQYVKIRYQVTKEIPALTAMIDDPLIKNDEKASAVAIQASRASA CCHHHHHHHHHHHHCCCCEEEEEEEECHHCHHHHHHHCCCCCCCCCCCCEEEEEEHHCCC MPGIPEMGEVWGPANSALELSVTGKQEPKVALDNAVKQINMQIEAMQASNQ CCCCCCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]