| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947158
Identifier: 153947158
GI number: 153947158
Start: 4619260
End: 4620030
Strand: Reverse
Name: 153947158
Synonym: YpsIP31758_4094
Alternate gene names: NA
Gene position: 4620030-4619260 (Counterclockwise)
Preceding gene: 153947597
Following gene: 153947989
Centisome position: 97.81
GC content: 46.3
Gene sequence:
>771_bases ATGACTGACGAAAACTTACCTCAGGCCCCTACCGGTGAATTTGTGATGTTTTCCACTGAGGATGGCCAACTTCGTATTGA ATGCCGTTTTGAAAGTGAAACTCTTTGGCTCCCTCAGGCAGCAATAGCAAATCTCTATCAAGTTACGCCTCAGGCGATCA CGCAGCATATTAAGGCTATCTACGAAGACGGCGAACTTGAGCAAAGTGCAACCTGTAAGCCTTTCTTACAAGTTCGTCAG GAAGGGACTCGGCAAGTAAATCGCAACACGATGCATTACAGCTTATCAGTAATACTTGCTGTGGGTTATCGGGTTCGTTC GGTTCGTGAGACTCAGTTCCTCCAGTGGGCTACACAAACTTTGCAGGAATATCTGATTAAAGGTTTTGTGATGGATGATG AGCGGCTGAAAAATCCGCCTGTTGGCCAGTCTGTAGTGCCGGATTACTTTGGCGAGATGTTGGAACGTATTCGCGATATC CGTGCTAGTGAGCGACGGGTTTATCTGCGGGTTCGAGAGATCTTTGCTTTAGCCGCCGACTATGAGCCTTCATTACAAGA GACGACCCGTTTTTTCCACGTTATTCAGAACAAATTACACTTTGCCTGTACCGGGCAAACAGCCGCAGAGCTTATCCACC AACGAGCTGATGCCAACTTACCGAATATGGGGCTGACCAGTTTTAAAGGTAATGCAGTCCGTAAAAGTGATGTAATCATT GCGAAGAACTATTTAAGTCAAAGTGAAGTTGATGACAGGCAAACACCTTAG
Upstream 100 bases:
>100_bases AAGTCAGAACTCCAGGAAGGAAAATATCCAGAAACATCACTGTTTCGGGTAAATAAATATGAAAAAACTTACGGATGAGC AAGATAAAAACGGAGATAGC
Downstream 100 bases:
>100_bases CGATAATAAACCGCGATATGCTGGCCTTGTACTTTTTCTATGCTTATTTTTATATCAAAAATTTCTTCGAGGATCGAAGG CTGCATAATTTCTGCTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MTDENLPQAPTGEFVMFSTEDGQLRIECRFESETLWLPQAAIANLYQVTPQAITQHIKAIYEDGELEQSATCKPFLQVRQ EGTRQVNRNTMHYSLSVILAVGYRVRSVRETQFLQWATQTLQEYLIKGFVMDDERLKNPPVGQSVVPDYFGEMLERIRDI RASERRVYLRVREIFALAADYEPSLQETTRFFHVIQNKLHFACTGQTAAELIHQRADANLPNMGLTSFKGNAVRKSDVII AKNYLSQSEVDDRQTP
Sequences:
>Translated_256_residues MTDENLPQAPTGEFVMFSTEDGQLRIECRFESETLWLPQAAIANLYQVTPQAITQHIKAIYEDGELEQSATCKPFLQVRQ EGTRQVNRNTMHYSLSVILAVGYRVRSVRETQFLQWATQTLQEYLIKGFVMDDERLKNPPVGQSVVPDYFGEMLERIRDI RASERRVYLRVREIFALAADYEPSLQETTRFFHVIQNKLHFACTGQTAAELIHQRADANLPNMGLTSFKGNAVRKSDVII AKNYLSQSEVDDRQTP >Mature_255_residues TDENLPQAPTGEFVMFSTEDGQLRIECRFESETLWLPQAAIANLYQVTPQAITQHIKAIYEDGELEQSATCKPFLQVRQE GTRQVNRNTMHYSLSVILAVGYRVRSVRETQFLQWATQTLQEYLIKGFVMDDERLKNPPVGQSVVPDYFGEMLERIRDIR ASERRVYLRVREIFALAADYEPSLQETTRFFHVIQNKLHFACTGQTAAELIHQRADANLPNMGLTSFKGNAVRKSDVIIA KNYLSQSEVDDRQTP
Specific function: Unknown
COG id: COG3943
COG function: function code R; Virulence protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29409; Mature: 29277
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDENLPQAPTGEFVMFSTEDGQLRIECRFESETLWLPQAAIANLYQVTPQAITQHIKAI CCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCEEECCHHHHHHHHHCCHHHHHHHHHHH YEDGELEQSATCKPFLQVRQEGTRQVNRNTMHYSLSVILAVGYRVRSVRETQFLQWATQT HCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQEYLIKGFVMDDERLKNPPVGQSVVPDYFGEMLERIRDIRASERRVYLRVREIFALAAD HHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YEPSLQETTRFFHVIQNKLHFACTGQTAAELIHQRADANLPNMGLTSFKGNAVRKSDVII CCCCHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCEEE AKNYLSQSEVDDRQTP EHHHCCHHCCCCCCCC >Mature Secondary Structure TDENLPQAPTGEFVMFSTEDGQLRIECRFESETLWLPQAAIANLYQVTPQAITQHIKAI CCCCCCCCCCCCEEEEECCCCEEEEEEEECCCEEECCHHHHHHHHHCCHHHHHHHHHHH YEDGELEQSATCKPFLQVRQEGTRQVNRNTMHYSLSVILAVGYRVRSVRETQFLQWATQT HCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQEYLIKGFVMDDERLKNPPVGQSVVPDYFGEMLERIRDIRASERRVYLRVREIFALAAD HHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YEPSLQETTRFFHVIQNKLHFACTGQTAAELIHQRADANLPNMGLTSFKGNAVRKSDVII CCCCHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCEEE AKNYLSQSEVDDRQTP EHHHCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA