| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947155
Identifier: 153947155
GI number: 153947155
Start: 2516836
End: 2517270
Strand: Direct
Name: 153947155
Synonym: YpsIP31758_2195
Alternate gene names: NA
Gene position: 2516836-2517270 (Clockwise)
Preceding gene: 153950014
Following gene: 153950673
Centisome position: 53.29
GC content: 35.4
Gene sequence:
>435_bases ATGTCGACAAAAACATTCTATTTTTCTCGATGGGCCGACATGCGAGCTGAAGGTGTTGGTGCTGTACATGCCTCTTTCTC ATTATCTATTAATGTAACTGAAGATAATGTTAAAGAAGGAAAGAGAATGTATTTATCAGCATCGCTGGTCTGTAATGCTG CTAAGGCCTATGGTTCCGGTAAAATTGTTCCCTGGTGTACAATAAAAAATAATATAGATAATAAAAAATATGTTTTAGAG AGTAATGGGGAATCTTTTATTCTCCGTCATGATGAAGTTCTTATCGGCAGCAGTTCATTTTTAATACCTTGTAAGAAAAA CATACTCCCCGTCTTAGATATAGAAGCTGGGTATTTTTTACATACAGGTTATACCGGAATAATCAGGCCATTCCCTGGTA GTTTGACCAGACAAATCACATTAAATAAATTTTAG
Upstream 100 bases:
>100_bases CGCCGGTTGAGGATGCAGCAAAAATTGGGTACCACAATCGCTGGCTGTATAATTTATATGCCCTACTCGGGCATTACTGA AAGATTAAAAAGGAATAAAA
Downstream 100 bases:
>100_bases GATAATTTATTATGAAAAAATCAGTTAAATTATCTGTAGCAATATTTTATTTATTCCTGTGTATACCCGTTTTTTCTCTT CCTATTTTTAATGAGAGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSTKTFYFSRWADMRAEGVGAVHASFSLSINVTEDNVKEGKRMYLSASLVCNAAKAYGSGKIVPWCTIKNNIDNKKYVLE SNGESFILRHDEVLIGSSSFLIPCKKNILPVLDIEAGYFLHTGYTGIIRPFPGSLTRQITLNKF
Sequences:
>Translated_144_residues MSTKTFYFSRWADMRAEGVGAVHASFSLSINVTEDNVKEGKRMYLSASLVCNAAKAYGSGKIVPWCTIKNNIDNKKYVLE SNGESFILRHDEVLIGSSSFLIPCKKNILPVLDIEAGYFLHTGYTGIIRPFPGSLTRQITLNKF >Mature_143_residues STKTFYFSRWADMRAEGVGAVHASFSLSINVTEDNVKEGKRMYLSASLVCNAAKAYGSGKIVPWCTIKNNIDNKKYVLES NGESFILRHDEVLIGSSSFLIPCKKNILPVLDIEAGYFLHTGYTGIIRPFPGSLTRQITLNKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16032; Mature: 15900
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKTFYFSRWADMRAEGVGAVHASFSLSINVTEDNVKEGKRMYLSASLVCNAAKAYGSG CCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCEEEEEEEHHEEECHHHCCCC KIVPWCTIKNNIDNKKYVLESNGESFILRHDEVLIGSSSFLIPCKKNILPVLDIEAGYFL CEEEEEEECCCCCCCEEEEECCCCEEEEEECEEEECCCCEEEECCCCCEEEEEECCCEEE HTGYTGIIRPFPGSLTRQITLNKF ECCCEEEEECCCCCCEEEEEEECC >Mature Secondary Structure STKTFYFSRWADMRAEGVGAVHASFSLSINVTEDNVKEGKRMYLSASLVCNAAKAYGSG CCCEEEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCEEEEEEEHHEEECHHHCCCC KIVPWCTIKNNIDNKKYVLESNGESFILRHDEVLIGSSSFLIPCKKNILPVLDIEAGYFL CEEEEEEECCCCCCCEEEEECCCCEEEEEECEEEECCCCEEEECCCCCEEEEEECCCEEE HTGYTGIIRPFPGSLTRQITLNKF ECCCEEEEECCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA