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The map label for this gene is yebF

Identifier: 153947130

GI number: 153947130

Start: 2646819

End: 2647229

Strand: Reverse

Name: yebF

Synonym: YpsIP31758_2347

Alternate gene names: 153947130

Gene position: 2647229-2646819 (Counterclockwise)

Preceding gene: 153948497

Following gene: 153948082

Centisome position: 56.05

GC content: 48.66

Gene sequence:

>411_bases
ATGAAAAAGACAGGGTTAGCTTTGGTGCTGGCAACCATACTACTTGGCATGATGGGCAGCGTACATGCCCAAGAGCCGCG
AGTCGTAAAAGTTCCTGCTTGTATCGGCTTGAATCAATCCCAGGTAGCAACTCAGGTCAAACGGGATTTCCTACAAAACC
GTATTCCTCGTTGGGAAGCAGATAAAAAACAGTTGGGCACAGATAAGCCGGTAGTGTGGATTAATGTGGTAGATATTATC
GGTAAAGATGATATCTGGCAGGTTCCACTGATCGCTCGGGGCAACAAGGGTGATAAAACGTATCAAGTGGTGCTCGACTG
CAAGTCTGGCACAATGACTTATACTGGGCTGAATGCTCAGACCAGGCCAGATCCCCAGATCGGTCTGAATAGCCAAGCCG
GGCCGAAGTAA

Upstream 100 bases:

>100_bases
AGTATTAATCACATCAGTTTGGTTGTGCTGTTCACTTTACAACCTGTGTTTCAATCATCACTCCAGTCACTAGATAGGAA
TAATAATGTGTGGAGGAGTG

Downstream 100 bases:

>100_bases
TTGCCAGGGCCGCTGACTGTTGAGGACCAGGCTCTTAATCAGTTGTTATTGCAGAGCAATAACCCGCTATGTTTGAGGGC
ATATTGCCCTCCATCTGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKKTGLALVLATILLGMMGSVHAQEPRVVKVPACIGLNQSQVATQVKRDFLQNRIPRWEADKKQLGTDKPVVWINVVDII
GKDDIWQVPLIARGNKGDKTYQVVLDCKSGTMTYTGLNAQTRPDPQIGLNSQAGPK

Sequences:

>Translated_136_residues
MKKTGLALVLATILLGMMGSVHAQEPRVVKVPACIGLNQSQVATQVKRDFLQNRIPRWEADKKQLGTDKPVVWINVVDII
GKDDIWQVPLIARGNKGDKTYQVVLDCKSGTMTYTGLNAQTRPDPQIGLNSQAGPK
>Mature_136_residues
MKKTGLALVLATILLGMMGSVHAQEPRVVKVPACIGLNQSQVATQVKRDFLQNRIPRWEADKKQLGTDKPVVWINVVDII
GKDDIWQVPLIARGNKGDKTYQVVLDCKSGTMTYTGLNAQTRPDPQIGLNSQAGPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yebF family

Homologues:

Organism=Escherichia coli, GI145693150, Length=117, Percent_Identity=43.5897435897436, Blast_Score=98, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YEBF_YERP3 (A7FJ88)

Other databases:

- EMBL:   CP000720
- RefSeq:   YP_001401316.1
- STRING:   A7FJ88
- GeneID:   5387307
- GenomeReviews:   CP000720_GR
- KEGG:   ypi:YpsIP31758_2347
- eggNOG:   NOG07537
- HOGENOM:   HBG636777
- OMA:   AQVKRDF
- ProtClustDB:   PRK13680
- BioCyc:   YPSE349747:YPSIP31758_2347-MONOMER
- HAMAP:   MF_01435
- InterPro:   IPR020236
- ProDom:   PD077599

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14906; Mature: 14906

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTGLALVLATILLGMMGSVHAQEPRVVKVPACIGLNQSQVATQVKRDFLQNRIPRWEA
CCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
DKKQLGTDKPVVWINVVDIIGKDDIWQVPLIARGNKGDKTYQVVLDCKSGTMTYTGLNAQ
CHHHCCCCCCEEEEEEEEECCCCCCEECCEEEECCCCCCEEEEEEECCCCEEEEECCCCC
TRPDPQIGLNSQAGPK
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKTGLALVLATILLGMMGSVHAQEPRVVKVPACIGLNQSQVATQVKRDFLQNRIPRWEA
CCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
DKKQLGTDKPVVWINVVDIIGKDDIWQVPLIARGNKGDKTYQVVLDCKSGTMTYTGLNAQ
CHHHCCCCCCEEEEEEEEECCCCCCEECCEEEECCCCCCEEEEEEECCCCEEEEECCCCC
TRPDPQIGLNSQAGPK
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA