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The map label for this gene is arnE

Identifier: 153947120

GI number: 153947120

Start: 1999502

End: 1999846

Strand: Direct

Name: arnE

Synonym: YpsIP31758_1730

Alternate gene names: 153947120

Gene position: 1999502-1999846 (Clockwise)

Preceding gene: 153950085

Following gene: 153947702

Centisome position: 42.33

GC content: 49.57

Gene sequence:

>345_bases
ATGAACAGCTACCTACTCTTGCTGATGGTCAGTCTATTAACCTGTATTGGGCAATTATGTCAAAAACAGGCTGCGCAGTG
TTGGGAGCAACCGCAGGCCCGGCGGTTGAATCTGACATTGCGTTGGTTGGCGATAGCTGTAGTGTCACTTGGCTTGGGGA
TGCTGTTGTGGCTGCGGTTATTGCAGCAACTCCCGCTGAGCGTGGCCTATCCTATGCTCAGCTTTAATTTTGTGTTGGTT
ACCTTGGCGGCACAACTATTTTACGGTGAAAAGGCCACTCTTCGGCATTGGTTGGGGGTTGCCGCTATTATATTCGGTAT
CTTGCTAATGAGTTGGCACCTATGA

Upstream 100 bases:

>100_bases
TGCAATTAGCCAAAAATGAAGCACTCCCGGCCCATCTGCCGCCAGCGGATAAGGTGAATTTAATGAATCGACTCGCCCTG
TTGTGGTACCAGAAAACACC

Downstream 100 bases:

>100_bases
AAGGGTATCTGTGGGGGGGGGCAAGCGTCGTATTGGTCACGGTGGCACAGTTGGTGTTGAAGTGGGGTATGATGAATATT
CCATTATTATCACTAGCCGA

Product: SMR family multidrug efflux pump

Products: NA

Alternate protein names: L-Ara4N-phosphoundecaprenol flippase subunit ArnE; Undecaprenyl phosphate-aminoarabinose flippase subunit ArnE

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MNSYLLLLMVSLLTCIGQLCQKQAAQCWEQPQARRLNLTLRWLAIAVVSLGLGMLLWLRLLQQLPLSVAYPMLSFNFVLV
TLAAQLFYGEKATLRHWLGVAAIIFGILLMSWHL

Sequences:

>Translated_114_residues
MNSYLLLLMVSLLTCIGQLCQKQAAQCWEQPQARRLNLTLRWLAIAVVSLGLGMLLWLRLLQQLPLSVAYPMLSFNFVLV
TLAAQLFYGEKATLRHWLGVAAIIFGILLMSWHL
>Mature_114_residues
MNSYLLLLMVSLLTCIGQLCQKQAAQCWEQPQARRLNLTLRWLAIAVVSLGLGMLLWLRLLQQLPLSVAYPMLSFNFVLV
TLAAQLFYGEKATLRHWLGVAAIIFGILLMSWHL

Specific function: Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain

Homologues:

Organism=Escherichia coli, GI87082074, Length=108, Percent_Identity=50.9259259259259, Blast_Score=86, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARNE_YERP3 (A7FHH7)

Other databases:

- EMBL:   CP000720
- RefSeq:   YP_001400705.1
- ProteinModelPortal:   A7FHH7
- STRING:   A7FHH7
- GeneID:   5384679
- GenomeReviews:   CP000720_GR
- KEGG:   ypi:YpsIP31758_1730
- eggNOG:   COG0697
- HOGENOM:   HBG682839
- OMA:   YPMLSIN
- ProtClustDB:   CLSK889176
- BioCyc:   YPSE349747:YPSIP31758_1730-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_01869
- InterPro:   IPR000620
- InterPro:   IPR022883

Pfam domain/function: PF00892 DUF6

EC number: NA

Molecular weight: Translated: 12942; Mature: 12942

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x200734ac)-; HASH(0x200b07dc)-; HASH(0x1f128a98)-;

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSYLLLLMVSLLTCIGQLCQKQAAQCWEQPQARRLNLTLRWLAIAVVSLGLGMLLWLRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQQLPLSVAYPMLSFNFVLVTLAAQLFYGEKATLRHWLGVAAIIFGILLMSWHL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MNSYLLLLMVSLLTCIGQLCQKQAAQCWEQPQARRLNLTLRWLAIAVVSLGLGMLLWLRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQQLPLSVAYPMLSFNFVLVTLAAQLFYGEKATLRHWLGVAAIIFGILLMSWHL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA