| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is pagO [H]
Identifier: 153946965
GI number: 153946965
Start: 2154709
End: 2155632
Strand: Reverse
Name: pagO [H]
Synonym: YpsIP31758_1859
Alternate gene names: 153946965
Gene position: 2155632-2154709 (Counterclockwise)
Preceding gene: 153950188
Following gene: 153949127
Centisome position: 45.64
GC content: 36.47
Gene sequence:
>924_bases ATGCGCAAGGTCATAATATCAATGCTATTTATATTGGTTTCTTTAACCTGGGGAACAACATGGTTGGCAATGAGAATTGC TGTTGAAACAATTCCACCTATATTTGCCACGGGGATGCGTTTTATATTTGCATCGCCTTTTTTAATCTGCATTGCATTGC TAACCAAAACACCACTTTTATTTCCAACTGGGCAACGATTTTTTCAATTTATAATCTGTATATTTTATTTCTCTATCCCT TTTACGTTAATGATTTATGGTGAGACTTATGTTAGTTCAGGTCTTGCCTCAATTATTTTTTCCAATATGCCAGTGGCAGT ATTAATCGCATCGGTTATCATTTTAAATGAAAAGACTAATTTAATGCAAATCACAGGGTTAACTATTGCAATGGTTTCTC TGGCAAGTATCCTCCTTGAGGAGTCAAAAACAGGTGTTGGGAGTCATTGGCAGGGGATTCTAGCTCTTGTTTCCGCCGTG ATTATACATGCGATTGTATATGCGCAATGCAAGAAAAGGTGCTGCACCGTCTCTGTTATCACATTTAATGCACTTCCTTG TTTTTTGGCGGGTTTAATTCTTGCATTTGCAGGGTATTTTTTTGAGAAGCCACAACTTGCGAATTTCTCAATTAATTCAA TGCTATCAACTTTTTACCTTGGCGCTTTTGCTGGAGTATTTGGCATTTTGTGCTATTTTCTGCTCCAACAAAAGGCTAAT GCTTTTCAGGCCTCTCTTGTATTTTTAATATTCCCTCTGATTGCCGTAAGTTTGGAGAGCTATATCTATGGATATGCAAT TTCATTTTACTCAATGCTGTTGATAATACCTTTAGCTTTTGGAATACTCATTATTCTTATCTCTAAGAACTATTATGCAG TAAAGAATCAGGGTGGTGTTACACCGGTGGATATAGATAGATAA
Upstream 100 bases:
>100_bases AAGAGAAAATAATTCTCCTAAACCATAAAAAATACATGCATAAGAAAATATTTTTCTCATATTAAAGATATATATTGGTT TCGTCTGTAGGGGAGGATTT
Downstream 100 bases:
>100_bases CTATTTGTTTTAATTAATTTCTCCCACACGGGTTCAGCCTGAAGTGGGATCCAGGAGGTTCACCATGCCAGCAATGGCTC GGCTGGAGCCCGAAGCATTG
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MRKVIISMLFILVSLTWGTTWLAMRIAVETIPPIFATGMRFIFASPFLICIALLTKTPLLFPTGQRFFQFIICIFYFSIP FTLMIYGETYVSSGLASIIFSNMPVAVLIASVIILNEKTNLMQITGLTIAMVSLASILLEESKTGVGSHWQGILALVSAV IIHAIVYAQCKKRCCTVSVITFNALPCFLAGLILAFAGYFFEKPQLANFSINSMLSTFYLGAFAGVFGILCYFLLQQKAN AFQASLVFLIFPLIAVSLESYIYGYAISFYSMLLIIPLAFGILIILISKNYYAVKNQGGVTPVDIDR
Sequences:
>Translated_307_residues MRKVIISMLFILVSLTWGTTWLAMRIAVETIPPIFATGMRFIFASPFLICIALLTKTPLLFPTGQRFFQFIICIFYFSIP FTLMIYGETYVSSGLASIIFSNMPVAVLIASVIILNEKTNLMQITGLTIAMVSLASILLEESKTGVGSHWQGILALVSAV IIHAIVYAQCKKRCCTVSVITFNALPCFLAGLILAFAGYFFEKPQLANFSINSMLSTFYLGAFAGVFGILCYFLLQQKAN AFQASLVFLIFPLIAVSLESYIYGYAISFYSMLLIIPLAFGILIILISKNYYAVKNQGGVTPVDIDR >Mature_307_residues MRKVIISMLFILVSLTWGTTWLAMRIAVETIPPIFATGMRFIFASPFLICIALLTKTPLLFPTGQRFFQFIICIFYFSIP FTLMIYGETYVSSGLASIIFSNMPVAVLIASVIILNEKTNLMQITGLTIAMVSLASILLEESKTGVGSHWQGILALVSAV IIHAIVYAQCKKRCCTVSVITFNALPCFLAGLILAFAGYFFEKPQLANFSINSMLSTFYLGAFAGVFGILCYFLLQQKAN AFQASLVFLIFPLIAVSLESYIYGYAISFYSMLLIIPLAFGILIILISKNYYAVKNQGGVTPVDIDR
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33916; Mature: 33916
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVIISMLFILVSLTWGTTWLAMRIAVETIPPIFATGMRFIFASPFLICIALLTKTPLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC FPTGQRFFQFIICIFYFSIPFTLMIYGETYVSSGLASIIFSNMPVAVLIASVIILNEKTN CCCHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC LMQITGLTIAMVSLASILLEESKTGVGSHWQGILALVSAVIIHAIVYAQCKKRCCTVSVI EEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEH TFNALPCFLAGLILAFAGYFFEKPQLANFSINSMLSTFYLGAFAGVFGILCYFLLQQKAN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFQASLVFLIFPLIAVSLESYIYGYAISFYSMLLIIPLAFGILIILISKNYYAVKNQGGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC TPVDIDR CCCCCCC >Mature Secondary Structure MRKVIISMLFILVSLTWGTTWLAMRIAVETIPPIFATGMRFIFASPFLICIALLTKTPLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC FPTGQRFFQFIICIFYFSIPFTLMIYGETYVSSGLASIIFSNMPVAVLIASVIILNEKTN CCCHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC LMQITGLTIAMVSLASILLEESKTGVGSHWQGILALVSAVIIHAIVYAQCKKRCCTVSVI EEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEH TFNALPCFLAGLILAFAGYFFEKPQLANFSINSMLSTFYLGAFAGVFGILCYFLLQQKAN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFQASLVFLIFPLIAVSLESYIYGYAISFYSMLLIIPLAFGILIILISKNYYAVKNQGGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC TPVDIDR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9712687; 11677609 [H]