| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153946941
Identifier: 153946941
GI number: 153946941
Start: 849479
End: 851704
Strand: Direct
Name: 153946941
Synonym: YpsIP31758_0696
Alternate gene names: NA
Gene position: 849479-851704 (Clockwise)
Preceding gene: 153947399
Following gene: 153947125
Centisome position: 17.98
GC content: 50.4
Gene sequence:
>2226_bases ATGTTTGCTGACAGTAATAAAGCCAAAGTAAAAGAACGTAGTGCAGTTAACTCGGCTTCAACGGGGACAGCCGCTATTTC TGCAGCAATTAACGCACCTTCCGGGCTACAATTTACGCTGACCGCTGCCGGTTTACCGCCTCAGACATTTGCCGTCGTCG ATTTTTCATTAAACGAGGCGTTCTCCTCACCTTTTGTTTTACATGTTGGCTTGGCCAGTGCCGATCCTGCGGTGGATTTT TCTGCGGTATTGGATGAAGACGCGACGTTGTCTATCTGGCGCGAAGGTATTTTACAGCGCAGTATTACTGGCATGATTGC CAGCTTTGAACAGGGCAATACCGGGTTTCACCAGACCCGCTACAGTATGGTGATCCGCCCCGCGCTGTGGCGCACTTCTT TGCGCCGCAACTCACGAATTTTCCAGTTGGAATCGGTTGAGGCCATCATTTCTACGCTGTTGAAAGAGAATGGCATTAAT GATTTTGCCTTCGGTTTCCGTCATTCACATCCAGCACGTGAGTTCTGTGTGCAATATCAAGAGTCGGATTTTGATTTTAT CCAGCGCCTGACAGCAGAAGAGGGCATTTTCTACTACTTCGAATTCAGCACGGGCAAAAACACCGTGGTCTATGCCGATG ATGTTGGCTCCCTGCCGAAGGGGGCGTCACTGCCGTATAACCCGAATGTGGCGGCACAGGCGCAGGAACTGAGCATCACC ACCTTTACCCGCAGCGCGCAAGTACGCCCGGCGATGGTACAGCTAAAAGACTACACCTTCAAAAATCCCAAATGGGCGGC TGAGTTCAGTGAACAAGCGCGCGAGTTACAGAATCAGAGGCCGGATTACGAGCATTTTGACTTCCCTGGGCGTTTCAAAG ATGAGCAACATGGCAAGGATTTTACCCGTTACCGGTTGGAGGCACTGCGCAACGATGCGAATAAGGGGCAGGGGGAAAGT AACGAATTTACCTTGCAGCCGGGGCAACTCTTTAGCCTGAGTGCCCACCCGCGTGACGATTTAAATCATGCCTGGCAGAT CGTCAGCATTCAGCATACCGGTAAACAGATGCAGGCACTGGAGCAAGAATCTGGCGATCAGGGTACCGTGTTGTTTAACC AGTTCAGCTTTATTCCACCGACGCAAACCTGGCGGCCAACGCCGCTGCCAAAACCAGTCACTGATGGCCCACAGATCGCG ATGGTCGTGGGGCCACCGAGCGAAGAAATTTACTGCGACGAGTATGGCCGCATCCGGCTGCAATTCCAGTGGGACCGCTA TGGTCAAAGTAACGATCAAAGTTCATGTTGGATCCGCGTTACCCAGCCGTGGGCTGGCCAAGGCTGGGGCATGTTGGCGA TCCCGCGTATCGGCCAGGAAGTGGTGGTAGATTTTCTGCACGGTGACCCGGACCAACCGATTGTCACCGGGCGCACTTAT CATGCTAATAACCTTCCCCCTTCAGCATTGCCTGGGGCGAAAACGCAGATGGCGCTACAGTCGAAAACCCATAAAGGCGA AGGCTATAACGAATTGCGTTTTGAGGATCAAGACGGTAAGCAAGAGCTGTCGATGCGAGCGCAGAGGGACATGAATACCA CGGTGTTGAATGACCGTTCGACCACGGTTTCAGGCAATCACACCGAAACGGTGACCAAAGATCAAGCGGTGACGGTTTCG GGTAATCAGACCATGGATATCACCCAAGACCAAACCATTACCGTCACTGGGACACAACGCATTGATGTGACTCAAGATCG CATCATTGACGTGACAGCAGAACAACAAACGACGGTAAAAGCAGATGATCGGTTACTGATATCTGGAAAACAGAAAACCA AGATAGATCTGGATCAGGAATATGAGGTTGTCGGCTCACAAAAAAAGACTATTGGGGCTAACCAAACACTGAAGGTGGGC GGATATCAAAAAAATACCCTAGAGGGTTATAAAAAATCCAAGATTGGCGGCGATAATACCACCACCGTTGGGGGGCACGA TAAATTAACCGTCGGTGACACAATCACGATCACCGCAGGCACCAGTATTACGCTGCAATGTGGTGCCTCCAGTATTGTTA TGGATGAAGCGGGTAATATAAAAATTACCGGGGTTAATATCACCTCTACGGCATCGACGACACATACGATAAAAGCTAAA ACAGTGACATCCTGCGGTGATACGGAAAATATCGTGGAAGGTGGCATTCTAAAATTAAATCCTTAA
Upstream 100 bases:
>100_bases CCGGCCGCTGATAAATCATCGCTAGAGTGCGTGTTTAATCCGTTATTTCTCACTGATGCGGTAGCCGTGTCTACGCATTA ACTTCCAGGATGGAGCAGAT
Downstream 100 bases:
>100_bases CGTATTGTCAGGAAGGATATTCGGTATGGAAACCCCAGGGGTAAGTAATCCTATTGAGCGTCGTTTTATGCAGGCGCATG ATGATTGGTTAACGTTTGCC
Product: VgrG protein
Products: NA
Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; VgrG-Like Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; Vgr Protein; Rhs Element Vgr Family; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; Vrg Family Protein; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; VgrG Family T6SS G; Vgr Family Type VI Secretion System
Number of amino acids: Translated: 741; Mature: 741
Protein sequence:
>741_residues MFADSNKAKVKERSAVNSASTGTAAISAAINAPSGLQFTLTAAGLPPQTFAVVDFSLNEAFSSPFVLHVGLASADPAVDF SAVLDEDATLSIWREGILQRSITGMIASFEQGNTGFHQTRYSMVIRPALWRTSLRRNSRIFQLESVEAIISTLLKENGIN DFAFGFRHSHPAREFCVQYQESDFDFIQRLTAEEGIFYYFEFSTGKNTVVYADDVGSLPKGASLPYNPNVAAQAQELSIT TFTRSAQVRPAMVQLKDYTFKNPKWAAEFSEQARELQNQRPDYEHFDFPGRFKDEQHGKDFTRYRLEALRNDANKGQGES NEFTLQPGQLFSLSAHPRDDLNHAWQIVSIQHTGKQMQALEQESGDQGTVLFNQFSFIPPTQTWRPTPLPKPVTDGPQIA MVVGPPSEEIYCDEYGRIRLQFQWDRYGQSNDQSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTY HANNLPPSALPGAKTQMALQSKTHKGEGYNELRFEDQDGKQELSMRAQRDMNTTVLNDRSTTVSGNHTETVTKDQAVTVS GNQTMDITQDQTITVTGTQRIDVTQDRIIDVTAEQQTTVKADDRLLISGKQKTKIDLDQEYEVVGSQKKTIGANQTLKVG GYQKNTLEGYKKSKIGGDNTTTVGGHDKLTVGDTITITAGTSITLQCGASSIVMDEAGNIKITGVNITSTASTTHTIKAK TVTSCGDTENIVEGGILKLNP
Sequences:
>Translated_741_residues MFADSNKAKVKERSAVNSASTGTAAISAAINAPSGLQFTLTAAGLPPQTFAVVDFSLNEAFSSPFVLHVGLASADPAVDF SAVLDEDATLSIWREGILQRSITGMIASFEQGNTGFHQTRYSMVIRPALWRTSLRRNSRIFQLESVEAIISTLLKENGIN DFAFGFRHSHPAREFCVQYQESDFDFIQRLTAEEGIFYYFEFSTGKNTVVYADDVGSLPKGASLPYNPNVAAQAQELSIT TFTRSAQVRPAMVQLKDYTFKNPKWAAEFSEQARELQNQRPDYEHFDFPGRFKDEQHGKDFTRYRLEALRNDANKGQGES NEFTLQPGQLFSLSAHPRDDLNHAWQIVSIQHTGKQMQALEQESGDQGTVLFNQFSFIPPTQTWRPTPLPKPVTDGPQIA MVVGPPSEEIYCDEYGRIRLQFQWDRYGQSNDQSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTY HANNLPPSALPGAKTQMALQSKTHKGEGYNELRFEDQDGKQELSMRAQRDMNTTVLNDRSTTVSGNHTETVTKDQAVTVS GNQTMDITQDQTITVTGTQRIDVTQDRIIDVTAEQQTTVKADDRLLISGKQKTKIDLDQEYEVVGSQKKTIGANQTLKVG GYQKNTLEGYKKSKIGGDNTTTVGGHDKLTVGDTITITAGTSITLQCGASSIVMDEAGNIKITGVNITSTASTTHTIKAK TVTSCGDTENIVEGGILKLNP >Mature_741_residues MFADSNKAKVKERSAVNSASTGTAAISAAINAPSGLQFTLTAAGLPPQTFAVVDFSLNEAFSSPFVLHVGLASADPAVDF SAVLDEDATLSIWREGILQRSITGMIASFEQGNTGFHQTRYSMVIRPALWRTSLRRNSRIFQLESVEAIISTLLKENGIN DFAFGFRHSHPAREFCVQYQESDFDFIQRLTAEEGIFYYFEFSTGKNTVVYADDVGSLPKGASLPYNPNVAAQAQELSIT TFTRSAQVRPAMVQLKDYTFKNPKWAAEFSEQARELQNQRPDYEHFDFPGRFKDEQHGKDFTRYRLEALRNDANKGQGES NEFTLQPGQLFSLSAHPRDDLNHAWQIVSIQHTGKQMQALEQESGDQGTVLFNQFSFIPPTQTWRPTPLPKPVTDGPQIA MVVGPPSEEIYCDEYGRIRLQFQWDRYGQSNDQSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTY HANNLPPSALPGAKTQMALQSKTHKGEGYNELRFEDQDGKQELSMRAQRDMNTTVLNDRSTTVSGNHTETVTKDQAVTVS GNQTMDITQDQTITVTGTQRIDVTQDRIIDVTAEQQTTVKADDRLLISGKQKTKIDLDQEYEVVGSQKKTIGANQTLKVG GYQKNTLEGYKKSKIGGDNTTTVGGHDKLTVGDTITITAGTSITLQCGASSIVMDEAGNIKITGVNITSTASTTHTIKAK TVTSCGDTENIVEGGILKLNP
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81761; Mature: 81761
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFADSNKAKVKERSAVNSASTGTAAISAAINAPSGLQFTLTAAGLPPQTFAVVDFSLNEA CCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCEEEEEEEEHHHH FSSPFVLHVGLASADPAVDFSAVLDEDATLSIWREGILQRSITGMIASFEQGNTGFHQTR CCCCEEEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEE YSMVIRPALWRTSLRRNSRIFQLESVEAIISTLLKENGINDFAFGFRHSHPAREFCVQYQ EEEEEEHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHC ESDFDFIQRLTAEEGIFYYFEFSTGKNTVVYADDVGSLPKGASLPYNPNVAAQAQELSIT CCCHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEE TFTRSAQVRPAMVQLKDYTFKNPKWAAEFSEQARELQNQRPDYEHFDFPGRFKDEQHGKD EEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH FTRYRLEALRNDANKGQGESNEFTLQPGQLFSLSAHPRDDLNHAWQIVSIQHTGKQMQAL HHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCEEEEEEEECCCHHHHHH EQESGDQGTVLFNQFSFIPPTQTWRPTPLPKPVTDGPQIAMVVGPPSEEIYCDEYGRIRL HHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEE QFQWDRYGQSNDQSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTY EEEECCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCEEECCEE HANNLPPSALPGAKTQMALQSKTHKGEGYNELRFEDQDGKQELSMRAQRDMNTTVLNDRS ECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCEEECCCC TTVSGNHTETVTKDQAVTVSGNQTMDITQDQTITVTGTQRIDVTQDRIIDVTAEQQTTVK CEECCCCCEEECCCCEEEECCCCEEEECCCCEEEEECCEEEECCCCEEEEEECCCCEEEE ADDRLLISGKQKTKIDLDQEYEVVGSQKKTIGANQTLKVGGYQKNTLEGYKKSKIGGDNT CCCEEEEECCCCCEECCCCCHHHHCCCCCCCCCCCEEEECCCCCHHHCCHHHHCCCCCCC TTVGGHDKLTVGDTITITAGTSITLQCGASSIVMDEAGNIKITGVNITSTASTTHTIKAK EEECCCCEEEECCEEEEEECCEEEEEECCCEEEEECCCCEEEEEEEEECCCCCEEEEEEE TVTSCGDTENIVEGGILKLNP EEECCCCCHHHHCCCEEEECC >Mature Secondary Structure MFADSNKAKVKERSAVNSASTGTAAISAAINAPSGLQFTLTAAGLPPQTFAVVDFSLNEA CCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCEEEEEEEEHHHH FSSPFVLHVGLASADPAVDFSAVLDEDATLSIWREGILQRSITGMIASFEQGNTGFHQTR CCCCEEEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEE YSMVIRPALWRTSLRRNSRIFQLESVEAIISTLLKENGINDFAFGFRHSHPAREFCVQYQ EEEEEEHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHC ESDFDFIQRLTAEEGIFYYFEFSTGKNTVVYADDVGSLPKGASLPYNPNVAAQAQELSIT CCCHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEE TFTRSAQVRPAMVQLKDYTFKNPKWAAEFSEQARELQNQRPDYEHFDFPGRFKDEQHGKD EEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH FTRYRLEALRNDANKGQGESNEFTLQPGQLFSLSAHPRDDLNHAWQIVSIQHTGKQMQAL HHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCEEEEEEEECCCHHHHHH EQESGDQGTVLFNQFSFIPPTQTWRPTPLPKPVTDGPQIAMVVGPPSEEIYCDEYGRIRL HHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEE QFQWDRYGQSNDQSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTY EEEECCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCEEECCEE HANNLPPSALPGAKTQMALQSKTHKGEGYNELRFEDQDGKQELSMRAQRDMNTTVLNDRS ECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCEEECCCC TTVSGNHTETVTKDQAVTVSGNQTMDITQDQTITVTGTQRIDVTQDRIIDVTAEQQTTVK CEECCCCCEEECCCCEEEECCCCEEEECCCCEEEEECCEEEECCCCEEEEEECCCCEEEE ADDRLLISGKQKTKIDLDQEYEVVGSQKKTIGANQTLKVGGYQKNTLEGYKKSKIGGDNT CCCEEEEECCCCCEECCCCCHHHHCCCCCCCCCCCEEEECCCCCHHHCCHHHHCCCCCCC TTVGGHDKLTVGDTITITAGTSITLQCGASSIVMDEAGNIKITGVNITSTASTTHTIKAK EEECCCCEEEECCEEEEEECCEEEEEECCCEEEEECCCCEEEEEEEEECCCCCEEEEEEE TVTSCGDTENIVEGGILKLNP EEECCCCCHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA