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The map label for this gene is 153946920

Identifier: 153946920

GI number: 153946920

Start: 405893

End: 406792

Strand: Reverse

Name: 153946920

Synonym: YpsIP31758_0344

Alternate gene names: NA

Gene position: 406792-405893 (Counterclockwise)

Preceding gene: 153948847

Following gene: 153950086

Centisome position: 8.61

GC content: 45.33

Gene sequence:

>900_bases
ATGATTAACGTTGGCATCTTTACCGGTTATTACCCTTACACCCTGAGTGGCACCATCGACAAAATTAAGCAGGCGGGTAT
GGGATGTGTGCAACTCGATCTTGAGTTCACCGACATTGATCTTCGCCGGGGGCGCATTACCAAAGAAAAAGCGCATCAGG
TACGTAATGCATTTCGTCGGGCGAATATTCCCATTGTGGCTATCTCGGCGTATACCAACTTAGTTCATCCGGACCCGGTA
AAACGTGCGGAAAATATTGCTGCGGTGAAAGAGATCCTCGCTCACGCTCGTCACTTTGGCACGCCATATGTCATTAGTGA
AACCGGAACTTATAATACGGACAGTGACTGGCTGTACGATCCTAAAAATAGTACTGAAGAGGCTTATCAGGAATTTAAAG
CTATCGCCAAAGAGTTAGCGACCTTTGCCTATGAGCATAATGCGGTGTTCCTCGTGGAAAATTACGTCAATAACATCATC
GGTTCCGTAGGACAGGTTGCCCGATTGATGCAAGAAGTTGAACATCCCGGATTAGGATTAGCCTTGGATCCCACCAACTA
TTTTGACGATAAAAACATAGATGCTATTGATGAAACACTGCACAACATTTTTAACGTACTCGAGAGCAGAATAAAAATCG
CTCATGCCAAAGACTGTAAAAAAACAGATGCTATCGCAGAGAAATTTGGTGGAGGTGCCGCGGAACATAACAGCTTTAGA
GGGGCGGGTTCAGTAGAATTACCGGCAGCAGGATTAGGCGCGTTGAATTATCCGTTATATGTCGAGTTGCTGGCCCAGAA
GCATCCTAATATTCCACTGATTATTGAACATGTTGATGAAGAGGATATCCCCCGAGCCAAACGCTTTGTTGACGAGGTTT
TAATGGCAACAGGCAGTTGA

Upstream 100 bases:

>100_bases
AAGACAATCTTGGTACGCTGGCCTGTATTGAGGCTTGTTATCTCTCTATTCAGCAAGAGAGAACCGTCTATCTCAATGAA
ATACTCCTGGAGAATGCAAA

Downstream 100 bases:

>100_bases
CCTGTTTTATCACGTAGAATTTATAAAACAAAAAAATGTGGCTGGCTAAACCAGTCACTTTGTATCACTAAAAATATTAT
AAAGACAGGGTTTACGCCCG

Product: AP endonuclease

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Xylose Isomerase Domain-Containing Protein TIM Barrel; AP Endonuclease; Epimerase Protein

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MINVGIFTGYYPYTLSGTIDKIKQAGMGCVQLDLEFTDIDLRRGRITKEKAHQVRNAFRRANIPIVAISAYTNLVHPDPV
KRAENIAAVKEILAHARHFGTPYVISETGTYNTDSDWLYDPKNSTEEAYQEFKAIAKELATFAYEHNAVFLVENYVNNII
GSVGQVARLMQEVEHPGLGLALDPTNYFDDKNIDAIDETLHNIFNVLESRIKIAHAKDCKKTDAIAEKFGGGAAEHNSFR
GAGSVELPAAGLGALNYPLYVELLAQKHPNIPLIIEHVDEEDIPRAKRFVDEVLMATGS

Sequences:

>Translated_299_residues
MINVGIFTGYYPYTLSGTIDKIKQAGMGCVQLDLEFTDIDLRRGRITKEKAHQVRNAFRRANIPIVAISAYTNLVHPDPV
KRAENIAAVKEILAHARHFGTPYVISETGTYNTDSDWLYDPKNSTEEAYQEFKAIAKELATFAYEHNAVFLVENYVNNII
GSVGQVARLMQEVEHPGLGLALDPTNYFDDKNIDAIDETLHNIFNVLESRIKIAHAKDCKKTDAIAEKFGGGAAEHNSFR
GAGSVELPAAGLGALNYPLYVELLAQKHPNIPLIIEHVDEEDIPRAKRFVDEVLMATGS
>Mature_299_residues
MINVGIFTGYYPYTLSGTIDKIKQAGMGCVQLDLEFTDIDLRRGRITKEKAHQVRNAFRRANIPIVAISAYTNLVHPDPV
KRAENIAAVKEILAHARHFGTPYVISETGTYNTDSDWLYDPKNSTEEAYQEFKAIAKELATFAYEHNAVFLVENYVNNII
GSVGQVARLMQEVEHPGLGLALDPTNYFDDKNIDAIDETLHNIFNVLESRIKIAHAKDCKKTDAIAEKFGGGAAEHNSFR
GAGSVELPAAGLGALNYPLYVELLAQKHPNIPLIIEHVDEEDIPRAKRFVDEVLMATGS

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33185; Mature: 33185

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINVGIFTGYYPYTLSGTIDKIKQAGMGCVQLDLEFTDIDLRRGRITKEKAHQVRNAFRR
CEEEEEECCCCCEEECCHHHHHHHCCCCEEEEEEEEECEECCCCCCCHHHHHHHHHHHHH
ANIPIVAISAYTNLVHPDPVKRAENIAAVKEILAHARHFGTPYVISETGTYNTDSDWLYD
CCCCEEEEECHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEC
PKNSTEEAYQEFKAIAKELATFAYEHNAVFLVENYVNNIIGSVGQVARLMQEVEHPGLGL
CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
ALDPTNYFDDKNIDAIDETLHNIFNVLESRIKIAHAKDCKKTDAIAEKFGGGAAEHNSFR
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GAGSVELPAAGLGALNYPLYVELLAQKHPNIPLIIEHVDEEDIPRAKRFVDEVLMATGS
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MINVGIFTGYYPYTLSGTIDKIKQAGMGCVQLDLEFTDIDLRRGRITKEKAHQVRNAFRR
CEEEEEECCCCCEEECCHHHHHHHCCCCEEEEEEEEECEECCCCCCCHHHHHHHHHHHHH
ANIPIVAISAYTNLVHPDPVKRAENIAAVKEILAHARHFGTPYVISETGTYNTDSDWLYD
CCCCEEEEECHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEC
PKNSTEEAYQEFKAIAKELATFAYEHNAVFLVENYVNNIIGSVGQVARLMQEVEHPGLGL
CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
ALDPTNYFDDKNIDAIDETLHNIFNVLESRIKIAHAKDCKKTDAIAEKFGGGAAEHNSFR
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GAGSVELPAAGLGALNYPLYVELLAQKHPNIPLIIEHVDEEDIPRAKRFVDEVLMATGS
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA