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The map label for this gene is yqjI [H]

Identifier: 153946904

GI number: 153946904

Start: 1086964

End: 1087644

Strand: Reverse

Name: yqjI [H]

Synonym: YpsIP31758_0905

Alternate gene names: 153946904

Gene position: 1087644-1086964 (Counterclockwise)

Preceding gene: 153950487

Following gene: 153947452

Centisome position: 23.03

GC content: 51.25

Gene sequence:

>681_bases
ATGTTTGGTCATTCAAAACACGATCATCGTCATGGTGGTCATCGCCATGAAGGACAGGGCCACTGCGGTGAAAAAATGCG
TCGCGGTGGTCGCCATAATGTGATGGCAGAAGATGCAGAATCGGCAAGAGGCGGCAAACATGGGCGCGGGCGTGGCGGTA
AAATGCATCGCCTGTTCGAACATGGGGATTTACGCGTGGTACTGCTGGCGCTACTGAATAAAACCCCCAGCCACGGCTAT
GAGCTGATTAAGGCTATTGAAGAAGCGTCATCAGGTCTATATGTGCCAAGCCCTGGGGTTATCTATCCAACACTGACACT
GTTGGAAGAGCAGGATTTTGTCACCCCCGTGGCCACGGGTAATGGCCGCAAAAGTTACCAAATTACTGACGCTGGGAAGT
TTGAACTACAGAAAAACCAAGCTATGGTCGATGTAATCTTTGCTCGTCTGGCGCAGGTAAACCGTCACAAAGAGGGGAAT
CTGGCTGAAGGTATTGCCGATGCAATGCACCGCTTACGCCACATTCTACGTAGCAATATGATGCGTGCGGATCTCACGCC
AGAACAAGTAGCGCGTATTAATACGGCGCTACTGGCTGCGGTAGACACCATTGAAGAAGAGTTGCAACCGGTTGGGGTGC
AACCTGCGGCAGTTGATACCACTGTACAGGAGAAAAACTGA

Upstream 100 bases:

>100_bases
TTAGATATATCTTTTTTTTATTTCTTTCTTGCCAATTTAGATATATCGGTATAGTTTAGATATATCGAAGTTGTTTCGAT
ATATCTAAAGGAGATTTACA

Downstream 100 bases:

>100_bases
TGCCCGGCTATCGTTATCGAATCACTATTGAACCCTTGACTGACCGTAAGGGCGAAGCCATTGATAAAGCCCCTGTCACC
TTTGAAGCCGAGAATCATGA

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MFGHSKHDHRHGGHRHEGQGHCGEKMRRGGRHNVMAEDAESARGGKHGRGRGGKMHRLFEHGDLRVVLLALLNKTPSHGY
ELIKAIEEASSGLYVPSPGVIYPTLTLLEEQDFVTPVATGNGRKSYQITDAGKFELQKNQAMVDVIFARLAQVNRHKEGN
LAEGIADAMHRLRHILRSNMMRADLTPEQVARINTALLAAVDTIEEELQPVGVQPAAVDTTVQEKN

Sequences:

>Translated_226_residues
MFGHSKHDHRHGGHRHEGQGHCGEKMRRGGRHNVMAEDAESARGGKHGRGRGGKMHRLFEHGDLRVVLLALLNKTPSHGY
ELIKAIEEASSGLYVPSPGVIYPTLTLLEEQDFVTPVATGNGRKSYQITDAGKFELQKNQAMVDVIFARLAQVNRHKEGN
LAEGIADAMHRLRHILRSNMMRADLTPEQVARINTALLAAVDTIEEELQPVGVQPAAVDTTVQEKN
>Mature_226_residues
MFGHSKHDHRHGGHRHEGQGHCGEKMRRGGRHNVMAEDAESARGGKHGRGRGGKMHRLFEHGDLRVVLLALLNKTPSHGY
ELIKAIEEASSGLYVPSPGVIYPTLTLLEEQDFVTPVATGNGRKSYQITDAGKFELQKNQAMVDVIFARLAQVNRHKEGN
LAEGIADAMHRLRHILRSNMMRADLTPEQVARINTALLAAVDTIEEELQPVGVQPAAVDTTVQEKN

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789452, Length=142, Percent_Identity=35.2112676056338, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 24937; Mature: 24937

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGHSKHDHRHGGHRHEGQGHCGEKMRRGGRHNVMAEDAESARGGKHGRGRGGKMHRLFE
CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHH
HGDLRVVLLALLNKTPSHGYELIKAIEEASSGLYVPSPGVIYPTLTLLEEQDFVTPVATG
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCEECC
NGRKSYQITDAGKFELQKNQAMVDVIFARLAQVNRHKEGNLAEGIADAMHRLRHILRSNM
CCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
MRADLTPEQVARINTALLAAVDTIEEELQPVGVQPAAVDTTVQEKN
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFGHSKHDHRHGGHRHEGQGHCGEKMRRGGRHNVMAEDAESARGGKHGRGRGGKMHRLFE
CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHH
HGDLRVVLLALLNKTPSHGYELIKAIEEASSGLYVPSPGVIYPTLTLLEEQDFVTPVATG
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCEECC
NGRKSYQITDAGKFELQKNQAMVDVIFARLAQVNRHKEGNLAEGIADAMHRLRHILRSNM
CCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
MRADLTPEQVARINTALLAAVDTIEEELQPVGVQPAAVDTTVQEKN
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]