| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is 153946876
Identifier: 153946876
GI number: 153946876
Start: 879419
End: 880777
Strand: Reverse
Name: 153946876
Synonym: YpsIP31758_0718
Alternate gene names: NA
Gene position: 880777-879419 (Counterclockwise)
Preceding gene: 153947446
Following gene: 153947998
Centisome position: 18.65
GC content: 49.37
Gene sequence:
>1359_bases ATGCTAACACGCCGGAAATTTTTGATGATGAGTGCCGGAGCAGGTCTTTTACTCTCTGTACCCATGTTGGCTCGAACCGG TGTTCAGCCTGCACAAGCTGCCACCGCCATTACGCAAGTTTTTGGTGACGGGATCCGGCTAACCGCTGTTGCGGTCGAAT ATCCGACAGAAGTCAGCGCTGAAGGGCTAAACCCCGCCGACTTTCATGTTGAAGGGCGAACAGTAACCGGTGTATGGACC AGCACTTCTACTAATCCGGCAGATATAGCGCCCTCAGGACGCTATATGATTATAGCGCTGTCACCTGATGACAAGAATGC AACGCTGGCCGAACAGGTGCAGCCAAATAGTAAAAACAACAGCAACAAATCTGCCAATGGAAGAGGCGGCCCCGGTAATG CAGGCGATATTCCTGCCTATGATACGGTTTACCGGACAGCTCAAGCCACGGTACTGCGCCTTCCGTCAGTTCATACCGCC AGTGGTGATACGCTTCCCGCTAGCGAGAAAGCGTTGACAACCCAATATGTGGAAAACTTGATCGTTGATGATTTTCAGCA GCTTGAGTTTTATGATGAAAAAACAGGTAAAAAGCTGAAATACAATCTTTTCATCCCCAAAGACTATAGCCCTGATAAAA ACTATAGCCCTGATAAGGCTTGGCCGCTGGTGTTATTCATGCATGATGCTGGCGCCACCAGCGATGTTACACGCACCACC CTGTATCAAGGCTTAGGCGCTATTGCTTGGGCAAGCCCAGAAGATCAGGCACAGCGCCCCTGCTTTGTTCTTGCACCTCA GTATGAAGAAATCATTGCCGATGATGACTCAAAAACATCTGACATGCTGGACACCACCATTGATCTTATCAATGTACTTT CAGAGCAGTACAACATTGATAAGAGCCGTATCTATGCCACAGGGCAGTCGGGTGGATGCATGATGACGATAGCGATGAAC ATCAAGTATCCGGATTTCTTCGCGGCCTCTTTTTTGGTTGCGGGTCAGTGGGATCCCGCGTTGGTGAAACCTCTTGCCCA GCAAAAACTCTGGATTCTGGTTTCTCAGGACGATAACAAAGCCTGGCCAGGTCAAAATGCCATCATTGATGTTCTGGAAA AAGAGGGTGTCCAAATCAGCCGTGCAATATGGGACGGAACATGGAATGAAGAGCAATTTCGTCAGGCTTTTGAACAAATA GAGGCAGAAAAAAGCCCGATTAACTATGTGGCATTTCGTGAAGGCACCGTGATTCCTGAGGGGCAATCCACCGAAGGTGC CAGCGGGCATCGCAATACCTGGCGAATTGCCTATACCATCTCCCCCATACGCGAATGGATTTTCAGGCAACAGCGCTAG
Upstream 100 bases:
>100_bases AATATGAGTCATCTATTTGCCACGAATCGCATAAACTCTTACAGCCTTGTTAAAATGAAACTAAAGTAGATACAACGTGC TGAGTTAAAGGAGACAAATA
Downstream 100 bases:
>100_bases TTGATTAACGAGGGCTTACCCAACGCCGCACGCTTCTCTTTGATCGTTCGACAGCCCTCACCCTTCGACAAAACGACGAT TTATTGAGCATTAAAGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase; Pyrroline-5-Carboxylate Reductase; Peptidase-Like Protein; Phospholipase/Carboxylesterase Family; Serine/Arginine Repetitive Matrix
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MLTRRKFLMMSAGAGLLLSVPMLARTGVQPAQAATAITQVFGDGIRLTAVAVEYPTEVSAEGLNPADFHVEGRTVTGVWT STSTNPADIAPSGRYMIIALSPDDKNATLAEQVQPNSKNNSNKSANGRGGPGNAGDIPAYDTVYRTAQATVLRLPSVHTA SGDTLPASEKALTTQYVENLIVDDFQQLEFYDEKTGKKLKYNLFIPKDYSPDKNYSPDKAWPLVLFMHDAGATSDVTRTT LYQGLGAIAWASPEDQAQRPCFVLAPQYEEIIADDDSKTSDMLDTTIDLINVLSEQYNIDKSRIYATGQSGGCMMTIAMN IKYPDFFAASFLVAGQWDPALVKPLAQQKLWILVSQDDNKAWPGQNAIIDVLEKEGVQISRAIWDGTWNEEQFRQAFEQI EAEKSPINYVAFREGTVIPEGQSTEGASGHRNTWRIAYTISPIREWIFRQQR
Sequences:
>Translated_452_residues MLTRRKFLMMSAGAGLLLSVPMLARTGVQPAQAATAITQVFGDGIRLTAVAVEYPTEVSAEGLNPADFHVEGRTVTGVWT STSTNPADIAPSGRYMIIALSPDDKNATLAEQVQPNSKNNSNKSANGRGGPGNAGDIPAYDTVYRTAQATVLRLPSVHTA SGDTLPASEKALTTQYVENLIVDDFQQLEFYDEKTGKKLKYNLFIPKDYSPDKNYSPDKAWPLVLFMHDAGATSDVTRTT LYQGLGAIAWASPEDQAQRPCFVLAPQYEEIIADDDSKTSDMLDTTIDLINVLSEQYNIDKSRIYATGQSGGCMMTIAMN IKYPDFFAASFLVAGQWDPALVKPLAQQKLWILVSQDDNKAWPGQNAIIDVLEKEGVQISRAIWDGTWNEEQFRQAFEQI EAEKSPINYVAFREGTVIPEGQSTEGASGHRNTWRIAYTISPIREWIFRQQR >Mature_452_residues MLTRRKFLMMSAGAGLLLSVPMLARTGVQPAQAATAITQVFGDGIRLTAVAVEYPTEVSAEGLNPADFHVEGRTVTGVWT STSTNPADIAPSGRYMIIALSPDDKNATLAEQVQPNSKNNSNKSANGRGGPGNAGDIPAYDTVYRTAQATVLRLPSVHTA SGDTLPASEKALTTQYVENLIVDDFQQLEFYDEKTGKKLKYNLFIPKDYSPDKNYSPDKAWPLVLFMHDAGATSDVTRTT LYQGLGAIAWASPEDQAQRPCFVLAPQYEEIIADDDSKTSDMLDTTIDLINVLSEQYNIDKSRIYATGQSGGCMMTIAMN IKYPDFFAASFLVAGQWDPALVKPLAQQKLWILVSQDDNKAWPGQNAIIDVLEKEGVQISRAIWDGTWNEEQFRQAFEQI EAEKSPINYVAFREGTVIPEGQSTEGASGHRNTWRIAYTISPIREWIFRQQR
Specific function: Unknown
COG id: COG4099
COG function: function code R; Predicted peptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49837; Mature: 49837
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRRKFLMMSAGAGLLLSVPMLARTGVQPAQAATAITQVFGDGIRLTAVAVEYPTEVSA CCCCCEEEEEECCCCCEEECHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCC EGLNPADFHVEGRTVTGVWTSTSTNPADIAPSGRYMIIALSPDDKNATLAEQVQPNSKNN CCCCCCCEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCC SNKSANGRGGPGNAGDIPAYDTVYRTAQATVLRLPSVHTASGDTLPASEKALTTQYVENL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCEECCCCCCCCCCHHHHHHHHHHHH IVDDFQQLEFYDEKTGKKLKYNLFIPKDYSPDKNYSPDKAWPLVLFMHDAGATSDVTRTT HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHH LYQGLGAIAWASPEDQAQRPCFVLAPQYEEIIADDDSKTSDMLDTTIDLINVLSEQYNID HHHCCCCEEECCCHHHHCCCEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC KSRIYATGQSGGCMMTIAMNIKYPDFFAASFLVAGQWDPALVKPLAQQKLWILVSQDDNK CCEEEEECCCCCEEEEEEEECCCCCHHHHHEEEECCCCHHHHHHHCCCEEEEEEECCCCC AWPGQNAIIDVLEKEGVQISRAIWDGTWNEEQFRQAFEQIEAEKSPINYVAFREGTVIPE CCCCCCHHHHHHHHCCCEEEEEHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCEECCC GQSTEGASGHRNTWRIAYTISPIREWIFRQQR CCCCCCCCCCCCEEEEEEEEHHHHHHHHHCCC >Mature Secondary Structure MLTRRKFLMMSAGAGLLLSVPMLARTGVQPAQAATAITQVFGDGIRLTAVAVEYPTEVSA CCCCCEEEEEECCCCCEEECHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCC EGLNPADFHVEGRTVTGVWTSTSTNPADIAPSGRYMIIALSPDDKNATLAEQVQPNSKNN CCCCCCCEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCC SNKSANGRGGPGNAGDIPAYDTVYRTAQATVLRLPSVHTASGDTLPASEKALTTQYVENL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCEECCCCCCCCCCHHHHHHHHHHHH IVDDFQQLEFYDEKTGKKLKYNLFIPKDYSPDKNYSPDKAWPLVLFMHDAGATSDVTRTT HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHH LYQGLGAIAWASPEDQAQRPCFVLAPQYEEIIADDDSKTSDMLDTTIDLINVLSEQYNID HHHCCCCEEECCCHHHHCCCEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC KSRIYATGQSGGCMMTIAMNIKYPDFFAASFLVAGQWDPALVKPLAQQKLWILVSQDDNK CCEEEEECCCCCEEEEEEEECCCCCHHHHHEEEECCCCHHHHHHHCCCEEEEEEECCCCC AWPGQNAIIDVLEKEGVQISRAIWDGTWNEEQFRQAFEQIEAEKSPINYVAFREGTVIPE CCCCCCHHHHHHHHCCCEEEEEHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCEECCC GQSTEGASGHRNTWRIAYTISPIREWIFRQQR CCCCCCCCCCCCEEEEEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA