| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153946848
Identifier: 153946848
GI number: 153946848
Start: 3874578
End: 3875321
Strand: Direct
Name: 153946848
Synonym: YpsIP31758_3438
Alternate gene names: NA
Gene position: 3874578-3875321 (Clockwise)
Preceding gene: 153949731
Following gene: 153948334
Centisome position: 82.03
GC content: 36.83
Gene sequence:
>744_bases ATGAGAAAGAAGCTATATAATGACTTCGCGTGGGAATGCCTGAGGCGAAATCCACAATATATTAGCGATTGGGAATTATT TATGAAAAATACTCTTACTAATGGAGGGGGTATACCCGATGACTCTGAATTAATCCAATCAGAGCTGGATTTGAATGCAG AAAAAAAATGGGGAGTAATGAAATATATTGATCCTTATAACTCTGACCCAACAAATGTTTTTTGGTCACTAAAATTAAGT AACCGTTCAGTTAGAGTTAAACTCAGTAATACTGGAAATGTCAAAGGGGGATATACATGGGGAGATATGTCCAACCTACC AGGAGTCAAACATCAACGCCTTCTTATGCATGACAATACACTGTGCGTAAAAATATTTAGTCAGAATGGGTATTTTCAGC TTTTTATCGAGAGTGCAGATGCATTAAAAGATGATTCAAACCTCTATATTTATATCCCTTTGAACCTTGAATCTGATGTT TTTGCTAAAAATATTGAGTTATTACAGAGCATTGTTAATCACAAAATAGAGGTGGAATGCAAAGAGGAGCAATATTTAGG TCTCTTGAAGACCATAGATGACAGAAAACAAGGCTTCTCCCACCGGGATATCGCTTCAGAAATTTTTGGTAAGGAACTGG TAAAAAATGAATGGTCTGCTGACAGTTGGGTCAGAGCAAAAATCCGCTATCGTATAAAGAAGGCGAATGCACTTATTAAT TACGGCTACCTGAACTTCCTCTAG
Upstream 100 bases:
>100_bases AACTTATTCGCAGATTTTTTCACCCTTCATACATTTATTAAATTTACATAACCATTAGCACGATGACGTGGATGAATAGC CAAAATAAGAGGACATAGAT
Downstream 100 bases:
>100_bases TGTCCTATCTGACATGCAAAGGATCTAAAATCTCTGGAGATTAAGAGGTATTATCACTGGATATAATTAATTATTTCAAT AGTATAATCTTCCAATGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MRKKLYNDFAWECLRRNPQYISDWELFMKNTLTNGGGIPDDSELIQSELDLNAEKKWGVMKYIDPYNSDPTNVFWSLKLS NRSVRVKLSNTGNVKGGYTWGDMSNLPGVKHQRLLMHDNTLCVKIFSQNGYFQLFIESADALKDDSNLYIYIPLNLESDV FAKNIELLQSIVNHKIEVECKEEQYLGLLKTIDDRKQGFSHRDIASEIFGKELVKNEWSADSWVRAKIRYRIKKANALIN YGYLNFL
Sequences:
>Translated_247_residues MRKKLYNDFAWECLRRNPQYISDWELFMKNTLTNGGGIPDDSELIQSELDLNAEKKWGVMKYIDPYNSDPTNVFWSLKLS NRSVRVKLSNTGNVKGGYTWGDMSNLPGVKHQRLLMHDNTLCVKIFSQNGYFQLFIESADALKDDSNLYIYIPLNLESDV FAKNIELLQSIVNHKIEVECKEEQYLGLLKTIDDRKQGFSHRDIASEIFGKELVKNEWSADSWVRAKIRYRIKKANALIN YGYLNFL >Mature_247_residues MRKKLYNDFAWECLRRNPQYISDWELFMKNTLTNGGGIPDDSELIQSELDLNAEKKWGVMKYIDPYNSDPTNVFWSLKLS NRSVRVKLSNTGNVKGGYTWGDMSNLPGVKHQRLLMHDNTLCVKIFSQNGYFQLFIESADALKDDSNLYIYIPLNLESDV FAKNIELLQSIVNHKIEVECKEEQYLGLLKTIDDRKQGFSHRDIASEIFGKELVKNEWSADSWVRAKIRYRIKKANALIN YGYLNFL
Specific function: Unknown
COG id: COG5419
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28767; Mature: 28767
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKLYNDFAWECLRRNPQYISDWELFMKNTLTNGGGIPDDSELIQSELDLNAEKKWGVM CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCEE KYIDPYNSDPTNVFWSLKLSNRSVRVKLSNTGNVKGGYTWGDMSNLPGVKHQRLLMHDNT EECCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCEEEEECCE LCVKIFSQNGYFQLFIESADALKDDSNLYIYIPLNLESDVFAKNIELLQSIVNHKIEVEC EEEEEECCCCEEEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEE KEEQYLGLLKTIDDRKQGFSHRDIASEIFGKELVKNEWSADSWVRAKIRYRIKKANALIN CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCEEEE YGYLNFL CCEEECC >Mature Secondary Structure MRKKLYNDFAWECLRRNPQYISDWELFMKNTLTNGGGIPDDSELIQSELDLNAEKKWGVM CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCEE KYIDPYNSDPTNVFWSLKLSNRSVRVKLSNTGNVKGGYTWGDMSNLPGVKHQRLLMHDNT EECCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCEEEEECCE LCVKIFSQNGYFQLFIESADALKDDSNLYIYIPLNLESDVFAKNIELLQSIVNHKIEVEC EEEEEECCCCEEEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEE KEEQYLGLLKTIDDRKQGFSHRDIASEIFGKELVKNEWSADSWVRAKIRYRIKKANALIN CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCEEEE YGYLNFL CCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA