Definition Yersinia pseudotuberculosis IP 31758, complete genome.
Accession NC_009708
Length 4,723,306

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The map label for this gene is 153946827

Identifier: 153946827

GI number: 153946827

Start: 4580007

End: 4580486

Strand: Reverse

Name: 153946827

Synonym: YpsIP31758_4065

Alternate gene names: NA

Gene position: 4580486-4580007 (Counterclockwise)

Preceding gene: 153949939

Following gene: 153948613

Centisome position: 96.98

GC content: 47.5

Gene sequence:

>480_bases
ATGAAAAAACAAATTTTAGCGACGTTGCTACTGGGCGCTCTGTTCTGTGTACCGGTTTATGCCGCACAGATTGTTGCCGT
CACGGCATCGGGGCATGACAGCGAAAAAGGCCACGTACCAGCGAATATTGCTGATGGGGATGTTAAAACACGTTGGGCGG
CTTCGGGTGATAGTTGGATTCAACTGGAGCTTGATAAAGCCCAATCGATTGAAAATATTCTGATCGTGCCGTTTAAGGCC
ACCGAGCGTAAGCTGAAATTTGCCATCGCTTACTCTACTGATGGCAAAACCTGGCAATCATTGGCCGAAGGGTTGGAAAC
GATAACTACGGACAAAAAGGGTGAGAAGTTGACCTTTTCGCCTATCAACGCCAAATATATCAAATTGGAAACCTTTGGCA
CGGATGTCAACAAATGGAGTGCGATTAACGAAGTCGCCATCAACAGTCTCGCCACGGTGCCTAGTCGCGCCCTTAATTAA

Upstream 100 bases:

>100_bases
CCGCTGCTGGTAAAAGTGCCGGGCTGCTGCTCCCCAGAGTCGGTTAGCCTCTGGCACTTTTCCCCACGGGTTATTGCAGC
GCAATAAAAAGGACTCTGAG

Downstream 100 bases:

>100_bases
CCGCTGATGATCGCTGCCGTAAACCGCTCCTGTGCTAGTTATTGCGCAGGAGCCTGTAAGTTCTATCCCCGTCTTATTTG
AAGTCACTGCTATTTGAAGA

Product: F5/8 type C domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MKKQILATLLLGALFCVPVYAAQIVAVTASGHDSEKGHVPANIADGDVKTRWAASGDSWIQLELDKAQSIENILIVPFKA
TERKLKFAIAYSTDGKTWQSLAEGLETITTDKKGEKLTFSPINAKYIKLETFGTDVNKWSAINEVAINSLATVPSRALN

Sequences:

>Translated_159_residues
MKKQILATLLLGALFCVPVYAAQIVAVTASGHDSEKGHVPANIADGDVKTRWAASGDSWIQLELDKAQSIENILIVPFKA
TERKLKFAIAYSTDGKTWQSLAEGLETITTDKKGEKLTFSPINAKYIKLETFGTDVNKWSAINEVAINSLATVPSRALN
>Mature_159_residues
MKKQILATLLLGALFCVPVYAAQIVAVTASGHDSEKGHVPANIADGDVKTRWAASGDSWIQLELDKAQSIENILIVPFKA
TERKLKFAIAYSTDGKTWQSLAEGLETITTDKKGEKLTFSPINAKYIKLETFGTDVNKWSAINEVAINSLATVPSRALN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17263; Mature: 17263

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS50022 FA58C_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQILATLLLGALFCVPVYAAQIVAVTASGHDSEKGHVPANIADGDVKTRWAASGDSWI
CCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEE
QLELDKAQSIENILIVPFKATERKLKFAIAYSTDGKTWQSLAEGLETITTDKKGEKLTFS
EEEECCCCCCCCEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEC
PINAKYIKLETFGTDVNKWSAINEVAINSLATVPSRALN
CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure
MKKQILATLLLGALFCVPVYAAQIVAVTASGHDSEKGHVPANIADGDVKTRWAASGDSWI
CCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEE
QLELDKAQSIENILIVPFKATERKLKFAIAYSTDGKTWQSLAEGLETITTDKKGEKLTFS
EEEECCCCCCCCEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEC
PINAKYIKLETFGTDVNKWSAINEVAINSLATVPSRALN
CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA