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The map label for this gene is 153952603

Identifier: 153952603

GI number: 153952603

Start: 1765174

End: 1766244

Strand: Direct

Name: 153952603

Synonym: JJD26997_2003

Alternate gene names: NA

Gene position: 1765174-1766244 (Clockwise)

Preceding gene: 153951123

Following gene: 153952306

Centisome position: 95.67

GC content: 30.53

Gene sequence:

>1071_bases
ATGCTTTTTACTTTATCTTTTGGTATAGAAAGACCTAAATTTGAAGATTTTTTAGCAGGTTATGAAAGAAATAAGGCAAG
CATGCTCAACTATGAAGGAATGCCGGCTTTTGCACTCAGTGAAAATTTACTTGCTGTGTTAAAACAGCCTAATGCTAAGC
TTAACAAATATGTAAAATACGATCCATTTTTAAATTTATACCTTGTAAGAACTGACTTTAGCCTAATCTCTACTCCTATG
GGTGATGAAGAAAAACTTACTCGTAATGATTGGGTTGGAATTTGGGATCCTAATAAACCTTATATAGGGCATATTAAGTA
TTTAGCTCAAAATATTGATGAAAAAGATCAACTTGATTTTAATTCTAAAATAGGACTTTTGGGGACTCCATGCTGTGAAA
TGATGGGAATTGCTTTAAATAACAGCTCTTTTATAGGCAATCGTTATTTAAAACATTTTATGAAATACAACGATGTTTAT
TGGGGAGATATTGGCGTTGATTTTATTGTTCGAGAAAATAAAATTTATGTTAACAATGTAAGAAAAAATCCACAATTTTT
AATCAATGATCAAATTATAAGTGTTGATGGTTTGCCTGCCAATGATTTAAGAAAACTCAATGAAAAAATTCTTTTTGCAG
ATCGCGGAAGCACTCTTTATTTTCAAGTGTTGCGTGATAATATGGATTTAAATATTTCTACCGAAGTTTTTGCAAAAGAT
TTGAGCAAATTTAACCTTCCTGATTCTAAACCAAAACCAAAAATTACAAATTTCACAAGCAATCTTGGTTTAACGGTTAA
TGCTAGTCTTGTTGTAACCAAAATAGATCCAAAATCGAAAGCATCAAGTGCAGGATTTATGGTAGGAGATAAAATTTTAC
GCGTTAATAATATTATTTTAAATAATTTTAAAGAATTACAAAATATTTTAAGCGCTGGTAATGACTTTAGCATCTTAATT
GAACGCAAAAGCACTAAATTACCTTTATCAAATTTCAACAGTGAATTAGGCGGAAATGCCAACTCAGGTGGCGATGGTAA
ATTCCAATTTTTCATAAGGCTTACTAAGTGA

Upstream 100 bases:

>100_bases
ATGTTTTAGCTATGATTGCACAAAATCGCTCAAGTATGGCAAATGATGTTTTAGGCGGTTTTGGAGGTATGAAATTATGA
AAAAAATTTTAATTATTTGC

Downstream 100 bases:

>100_bases
ATTTAAAAGAACTTTTTATCCATCACTTAGAAAAAAATCTACCCAAAGTTGAAAGCTTTCATCCTTTTTTCAATGAAGCT
TTAGCACTTATGTTAAAAGC

Product: PDZ domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MLFTLSFGIERPKFEDFLAGYERNKASMLNYEGMPAFALSENLLAVLKQPNAKLNKYVKYDPFLNLYLVRTDFSLISTPM
GDEEKLTRNDWVGIWDPNKPYIGHIKYLAQNIDEKDQLDFNSKIGLLGTPCCEMMGIALNNSSFIGNRYLKHFMKYNDVY
WGDIGVDFIVRENKIYVNNVRKNPQFLINDQIISVDGLPANDLRKLNEKILFADRGSTLYFQVLRDNMDLNISTEVFAKD
LSKFNLPDSKPKPKITNFTSNLGLTVNASLVVTKIDPKSKASSAGFMVGDKILRVNNIILNNFKELQNILSAGNDFSILI
ERKSTKLPLSNFNSELGGNANSGGDGKFQFFIRLTK

Sequences:

>Translated_356_residues
MLFTLSFGIERPKFEDFLAGYERNKASMLNYEGMPAFALSENLLAVLKQPNAKLNKYVKYDPFLNLYLVRTDFSLISTPM
GDEEKLTRNDWVGIWDPNKPYIGHIKYLAQNIDEKDQLDFNSKIGLLGTPCCEMMGIALNNSSFIGNRYLKHFMKYNDVY
WGDIGVDFIVRENKIYVNNVRKNPQFLINDQIISVDGLPANDLRKLNEKILFADRGSTLYFQVLRDNMDLNISTEVFAKD
LSKFNLPDSKPKPKITNFTSNLGLTVNASLVVTKIDPKSKASSAGFMVGDKILRVNNIILNNFKELQNILSAGNDFSILI
ERKSTKLPLSNFNSELGGNANSGGDGKFQFFIRLTK
>Mature_356_residues
MLFTLSFGIERPKFEDFLAGYERNKASMLNYEGMPAFALSENLLAVLKQPNAKLNKYVKYDPFLNLYLVRTDFSLISTPM
GDEEKLTRNDWVGIWDPNKPYIGHIKYLAQNIDEKDQLDFNSKIGLLGTPCCEMMGIALNNSSFIGNRYLKHFMKYNDVY
WGDIGVDFIVRENKIYVNNVRKNPQFLINDQIISVDGLPANDLRKLNEKILFADRGSTLYFQVLRDNMDLNISTEVFAKD
LSKFNLPDSKPKPKITNFTSNLGLTVNASLVVTKIDPKSKASSAGFMVGDKILRVNNIILNNFKELQNILSAGNDFSILI
ERKSTKLPLSNFNSELGGNANSGGDGKFQFFIRLTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40369; Mature: 40369

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFTLSFGIERPKFEDFLAGYERNKASMLNYEGMPAFALSENLLAVLKQPNAKLNKYVKY
CEEEEECCCCCCCHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCHHHCEEEE
DPFLNLYLVRTDFSLISTPMGDEEKLTRNDWVGIWDPNKPYIGHIKYLAQNIDEKDQLDF
CCCEEEEEEEECHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCC
NSKIGLLGTPCCEMMGIALNNSSFIGNRYLKHFMKYNDVYWGDIGVDFIVRENKIYVNNV
CCCCCCCCCCHHHHHEEEECCCCCHHHHHHHHHHHHCCEEEECCCEEEEEECCEEEEEEC
RKNPQFLINDQIISVDGLPANDLRKLNEKILFADRGSTLYFQVLRDNMDLNISTEVFAKD
CCCCCEEEECEEEEECCCCHHHHHHHCCEEEEEECCCEEEEEEECCCCCCEEEHHHHHHH
LSKFNLPDSKPKPKITNFTSNLGLTVNASLVVTKIDPKSKASSAGFMVGDKILRVNNIIL
HHHCCCCCCCCCCCEECCCCCCCEEEEEEEEEEEECCCCCCCCCCEEECCEEEEHHHHHH
NNFKELQNILSAGNDFSILIERKSTKLPLSNFNSELGGNANSGGDGKFQFFIRLTK
HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCHHHCCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MLFTLSFGIERPKFEDFLAGYERNKASMLNYEGMPAFALSENLLAVLKQPNAKLNKYVKY
CEEEEECCCCCCCHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCHHHCEEEE
DPFLNLYLVRTDFSLISTPMGDEEKLTRNDWVGIWDPNKPYIGHIKYLAQNIDEKDQLDF
CCCEEEEEEEECHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCC
NSKIGLLGTPCCEMMGIALNNSSFIGNRYLKHFMKYNDVYWGDIGVDFIVRENKIYVNNV
CCCCCCCCCCHHHHHEEEECCCCCHHHHHHHHHHHHCCEEEECCCEEEEEECCEEEEEEC
RKNPQFLINDQIISVDGLPANDLRKLNEKILFADRGSTLYFQVLRDNMDLNISTEVFAKD
CCCCCEEEECEEEEECCCCHHHHHHHCCEEEEEECCCEEEEEEECCCCCCEEEHHHHHHH
LSKFNLPDSKPKPKITNFTSNLGLTVNASLVVTKIDPKSKASSAGFMVGDKILRVNNIIL
HHHCCCCCCCCCCCEECCCCCCCEEEEEEEEEEEECCCCCCCCCCEEECCEEEEHHHHHH
NNFKELQNILSAGNDFSILIERKSTKLPLSNFNSELGGNANSGGDGKFQFFIRLTK
HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCHHHCCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA