| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
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The map label for this gene is hldE [H]
Identifier: 153952428
GI number: 153952428
Start: 520381
End: 521766
Strand: Direct
Name: hldE [H]
Synonym: JJD26997_0578
Alternate gene names: 153952428
Gene position: 520381-521766 (Clockwise)
Preceding gene: 153951617
Following gene: 153951000
Centisome position: 28.2
GC content: 34.27
Gene sequence:
>1386_bases ATGCTTGAGTTTTTAAGCCAGCAAAAACCTAAAATTTTAATTATAGGGGATTTTATGGTGGATAATTACACTTGGTGTGA TTGTTCGCGTATCAGTCCTGAAGCCCCTGTTTTGGTAGCTAAAACTCTTAAAGAAGATAAAAGATTAGGCGGGGCTGCGA ATGTTTATGCAAATTTAAAAAGTTTAGGTGCTGATGTTTTTGCACTTGGTGTTGTGGGTGATGATGAGAGTGGGAAATTT TTACAAGAAAATTTAAAAGGAGAATTTTTGATCCAAAAAGGACGCAAAACCCCTTTTAAAAACCGCATTATGGCACACAA TCAGCAGGTTTTAAGACTAGATGAAGAAGATACAAGTGAGATTTTGCTTGAAAATGAGCTTATTGCTTTGTTTGATGAAA AGATTAAAGATTTTAAGGCTGTGGTTTTAAGTGACTATGCTAAGGGTATTTTAACGCCCAAGGTTTGCAAAGCTTTGATA AAAAAAGCTAAGGCTTTAAATATCCCTGTTTTAGTTGATCCTAAAGGCAGTGATTTTAGTAAATATAGCGGTGCAACCTT ACTTACGCCTAATAAAAAAGAAGCTTTAGAGGCTTTGAAATTTGAAAATTTAGAGGGTGAAAATTTAGAAAAAGGGATTA AAAAATTAAAAGAAGATTTTGCTTTGCGTTATTCTATCATCACTCTTTCAGAAGCGGGGATTGCACTTTTTGATAAGAGT TTAAAAATCGCTCCTGCTAAAGCCTTAGAGGTTTATGATGTAACAGGAGCTGGCGATAGTGTGATTGCGGTTTTGGCTTT TTGTCTGGCAAATGGGGTTGAAATTTTTAAAGCTTGCGAACTTGCCAATGAAGCCGCAGCTGTTGTGGTGGGTAAAATAG GTAGCGTGAGTGTGAGTTTTGATGAGATTAAGAGTTTTAATCGTGTGGATTTTGAGAAAAAAATCAAAAGCAAAGAAGAA CTTTTAACACTCTTAAAACAAAAGGATAAAAAGATCGTTTTTACAAATGGTTGTTTTGATATAGTGCATTTTGGGCATAT AAAATACCTTGAAAAAGCTAAAAGATTGGGCGATGTTTTGATTGTGGGTTTAAACTCAGATGCGAGTGTGAAAAAACTCA AAGGCGAGAGTCGTCCTGTAAATTCAGAGTTTCAAAGAGCTTGTATGTTGGCAGCTTTTTATTTTGTAGATTTTGTAGTG ATTTTTGATGAAGATACGCCTTTGGAACTTATAAGCTTTTTAAAGCCTGATATTTTGGTTAAAGGAGCTGATTATAAAGA TAAAATTGTTGTGGGTGCGGATATTGTTTCAAAGGTTGAATTAATCGACTTTGAAGAAGGATTTAGTACAAGCAAGATCA TAGAAAAAATAAAGGATAAAAAATGA
Upstream 100 bases:
>100_bases AAACTAGATCAAACTTGGGATTATCAGCCAAAATTTAGTCTTGAAGAGGGGATAAAAGATTATTTAGGCGAGATAAAAAG ACTTTTCGAAAAGGAAGTAA
Downstream 100 bases:
>100_bases TAAATTTAGTAGAAAAAGAATGGCAAGAACATCAAAAAATAGCTCAAGCCAGTGAAATTTTAAAAGGACAAATCGCTAAA GTAGGCGAACTTTTGTGCGA
Product: D,D-heptose 1-phosphate adenosyltransferase/7-phosphate kinase
Products: NA
Alternate protein names: D-beta-D-heptose 7-phosphate kinase; D-beta-D-heptose 7-phosphotransferase; D-beta-D-heptose 1-phosphate adenosyltransferase [H]
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MLEFLSQQKPKILIIGDFMVDNYTWCDCSRISPEAPVLVAKTLKEDKRLGGAANVYANLKSLGADVFALGVVGDDESGKF LQENLKGEFLIQKGRKTPFKNRIMAHNQQVLRLDEEDTSEILLENELIALFDEKIKDFKAVVLSDYAKGILTPKVCKALI KKAKALNIPVLVDPKGSDFSKYSGATLLTPNKKEALEALKFENLEGENLEKGIKKLKEDFALRYSIITLSEAGIALFDKS LKIAPAKALEVYDVTGAGDSVIAVLAFCLANGVEIFKACELANEAAAVVVGKIGSVSVSFDEIKSFNRVDFEKKIKSKEE LLTLLKQKDKKIVFTNGCFDIVHFGHIKYLEKAKRLGDVLIVGLNSDASVKKLKGESRPVNSEFQRACMLAAFYFVDFVV IFDEDTPLELISFLKPDILVKGADYKDKIVVGADIVSKVELIDFEEGFSTSKIIEKIKDKK
Sequences:
>Translated_461_residues MLEFLSQQKPKILIIGDFMVDNYTWCDCSRISPEAPVLVAKTLKEDKRLGGAANVYANLKSLGADVFALGVVGDDESGKF LQENLKGEFLIQKGRKTPFKNRIMAHNQQVLRLDEEDTSEILLENELIALFDEKIKDFKAVVLSDYAKGILTPKVCKALI KKAKALNIPVLVDPKGSDFSKYSGATLLTPNKKEALEALKFENLEGENLEKGIKKLKEDFALRYSIITLSEAGIALFDKS LKIAPAKALEVYDVTGAGDSVIAVLAFCLANGVEIFKACELANEAAAVVVGKIGSVSVSFDEIKSFNRVDFEKKIKSKEE LLTLLKQKDKKIVFTNGCFDIVHFGHIKYLEKAKRLGDVLIVGLNSDASVKKLKGESRPVNSEFQRACMLAAFYFVDFVV IFDEDTPLELISFLKPDILVKGADYKDKIVVGADIVSKVELIDFEEGFSTSKIIEKIKDKK >Mature_461_residues MLEFLSQQKPKILIIGDFMVDNYTWCDCSRISPEAPVLVAKTLKEDKRLGGAANVYANLKSLGADVFALGVVGDDESGKF LQENLKGEFLIQKGRKTPFKNRIMAHNQQVLRLDEEDTSEILLENELIALFDEKIKDFKAVVLSDYAKGILTPKVCKALI KKAKALNIPVLVDPKGSDFSKYSGATLLTPNKKEALEALKFENLEGENLEKGIKKLKEDFALRYSIITLSEAGIALFDKS LKIAPAKALEVYDVTGAGDSVIAVLAFCLANGVEIFKACELANEAAAVVVGKIGSVSVSFDEIKSFNRVDFEKKIKSKEE LLTLLKQKDKKIVFTNGCFDIVHFGHIKYLEKAKRLGDVLIVGLNSDASVKKLKGESRPVNSEFQRACMLAAFYFVDFVV IFDEDTPLELISFLKPDILVKGADYKDKIVVGADIVSKVELIDFEEGFSTSKIIEKIKDKK
Specific function: Catalyzes the ADP transfer to D-glycero-D-manno-heptose 1-phosphate, yielding ADP-D,D-heptose [H]
COG id: COG2870
COG function: function code M; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the cytidylyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789432, Length=470, Percent_Identity=43.1914893617021, Blast_Score=350, Evalue=1e-97, Organism=Caenorhabditis elegans, GI193203447, Length=82, Percent_Identity=41.4634146341463, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17509873, Length=82, Percent_Identity=41.4634146341463, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI19921220, Length=137, Percent_Identity=37.956204379562, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI45550973, Length=137, Percent_Identity=37.956204379562, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI45550974, Length=137, Percent_Identity=37.956204379562, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI45550975, Length=137, Percent_Identity=37.956204379562, Blast_Score=74, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023030 - InterPro: IPR011611 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR011913 - InterPro: IPR011914 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2; PF00294 PfkB [H]
EC number: 2.7.-.-
Molecular weight: Translated: 51042; Mature: 51042
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEFLSQQKPKILIIGDFMVDNYTWCDCSRISPEAPVLVAKTLKEDKRLGGAANVYANLK CCCCCCCCCCCEEEEEEEEECCCEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH SLGADVFALGVVGDDESGKFLQENLKGEFLIQKGRKTPFKNRIMAHNQQVLRLDEEDTSE HCCCCEEEEEEECCCCCCHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCEEEECCCCCHH ILLENELIALFDEKIKDFKAVVLSDYAKGILTPKVCKALIKKAKALNIPVLVDPKGSDFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCC KYSGATLLTPNKKEALEALKFENLEGENLEKGIKKLKEDFALRYSIITLSEAGIALFDKS CCCCCEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCEEECCC LKIAPAKALEVYDVTGAGDSVIAVLAFCLANGVEIFKACELANEAAAVVVGKIGSVSVSF CCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCEEEEH DEIKSFNRVDFEKKIKSKEELLTLLKQKDKKIVFTNGCFDIVHFGHIKYLEKAKRLGDVL HHHHCCCCCCHHHHHCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEE IVGLNSDASVKKLKGESRPVNSEFQRACMLAAFYFVDFVVIFDEDTPLELISFLKPDILV EEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHCCCCEEE KGADYKDKIVVGADIVSKVELIDFEEGFSTSKIIEKIKDKK ECCCCCCCEEECHHHHHHEEEEECCCCCCHHHHHHHHHCCC >Mature Secondary Structure MLEFLSQQKPKILIIGDFMVDNYTWCDCSRISPEAPVLVAKTLKEDKRLGGAANVYANLK CCCCCCCCCCCEEEEEEEEECCCEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH SLGADVFALGVVGDDESGKFLQENLKGEFLIQKGRKTPFKNRIMAHNQQVLRLDEEDTSE HCCCCEEEEEEECCCCCCHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCEEEECCCCCHH ILLENELIALFDEKIKDFKAVVLSDYAKGILTPKVCKALIKKAKALNIPVLVDPKGSDFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCC KYSGATLLTPNKKEALEALKFENLEGENLEKGIKKLKEDFALRYSIITLSEAGIALFDKS CCCCCEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCEEECCC LKIAPAKALEVYDVTGAGDSVIAVLAFCLANGVEIFKACELANEAAAVVVGKIGSVSVSF CCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCEEEEH DEIKSFNRVDFEKKIKSKEELLTLLKQKDKKIVFTNGCFDIVHFGHIKYLEKAKRLGDVL HHHHCCCCCCHHHHHCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEE IVGLNSDASVKKLKGESRPVNSEFQRACMLAAFYFVDFVVIFDEDTPLELISFLKPDILV EEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHCCCCEEE KGADYKDKIVVGADIVSKVELIDFEEGFSTSKIIEKIKDKK ECCCCCCCEEECHHHHHHEEEEECCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA