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The map label for this gene is 153952368

Identifier: 153952368

GI number: 153952368

Start: 704436

End: 705836

Strand: Direct

Name: 153952368

Synonym: JJD26997_0780

Alternate gene names: NA

Gene position: 704436-705836 (Clockwise)

Preceding gene: 153951997

Following gene: 153951199

Centisome position: 38.18

GC content: 27.19

Gene sequence:

>1401_bases
ATGAATAATATTTTAATTATAATAGACGGTATTTTAGCAAAGCATTTCTTAGAAAGGCTTTGTTTTGAAAAAGGCTTAGG
TTATTTTTTTACAGTAGTGTGTCAAAATAGTGAAAAAAATAACTTAAATATTTCTAGTGAGTATATTGACTTGCATTATT
TTGATCCTACAAGCACAGCGCGTCTTGAAAATATTATGAGTAAAGATTTTAAACAGGCTTTTATTTATATGCAAGATGAA
TTTGAAACTAAAAAAAGTTATGAGGCTTTGCGTTCTTTAAATCCAAATTTAGAAATAGAAATAATGGATTTTTGGGGTTT
AAGTGTTAATGATACTCATGCAAATTTAGCTGATGCTAGAATGACTTTAAGCCGTAGATTTATGGATTTTTTACCAGATA
TTGCTTTAACAGCTCAGTATATAGGACTTGGGGTTGGAGAGATTATGGAAGTAAAAATTCCAGCAGGGTCTATTTTTGCT
TATAGGCACATAAGTTCAATACAACAAAAAAGATGGCGCATAGTCCTTATTTATAGAAATTCTAAGATTTATTTTGTAAA
ACCATCTTTTGTTTTAGAACCAAATGATAGCATTTTGATCGTTGGAGATCCTGTTGTTTTACAAAGTATTTTTCATAATA
TAAGAGACAAAGCAGGGCAATTTCCTATGCCTTTTGGAAGTAATGTTTTTGCTTTAATTGATATGAAAAATATGAATCAA
AATATGCAAGAAAGAGTGCTTGATACTACTTTAAAATTAACTCAAAAAAGCAATGCAAAAAGATTTTTTATACATGTTAT
CAATCCTAAATTAGGGGCAATGTATGAAAAATTAAAAAAACTTTCTGAGGATAAAGAAGGTGTGTTTTTTGATTATTTTA
ACACGGATTTTAAACAAATTTCCACATGGTTGCAAAATAATGATATAGGATTAGTTGTAACCGATATAAAAAATTTTGAG
AAAGAAAAACAAGCTTTTTTTGATTTAAAAATTCCTATTATGAAGGTGGGTAAAGCTTCTTTTGATGAGCTTAAAGAAGC
AATTATCTTAAGTGCTGATGAGAGTGAACTTGAAAACAATGCAAATGTTATTACTGATTTAAGTAAACAGCTTGATTTTG
GAGTTATCTTATATTATTATAATCCAAATTCTCAAAATATTACAGATATGGAGGAGTATTTTAGAAGTTTATCTAAGCTT
TATGATAAAAATATACAAATTATTAATAAAAATGATGAAAACCCCCTTTTAAATTTACAATATCGCGAAGATTTGTTACA
ATTTGTGAGTTTTCAAAAAGAATTACTAAATAGAGATTTTGGCAAGAATTTAAGTACAAATTTAAATAGGCATTATTATA
AAATGAGACAAAATTACCAACTTTTCATACCCGTAGAATAA

Upstream 100 bases:

>100_bases
AAAGTGCTGTGTGCGGTAGTGATTTCACAAACCCTTGCCATGCCATCTTTATGCTTTAATTTAAATTCCATTTGTTATAA
TTTCCTTTTTGGAGTTTAAA

Downstream 100 bases:

>100_bases
ATAATTAACCAAATGTGATAGAATAAACGCAAAAAGAGTAGTTCAATGCAAGTAGAAGTTAAGTTAAAAGAAAATGCTTA
TAAGGTTTATATTGATGAAC

Product: TrkA domain-containing protein

Products: NA

Alternate protein names: TrkA-C; TrkA-C Domain-Containing Protein; TrkA Domain Protein; Trka-C Domain Protein; TrkA-C Domain Protein

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MNNILIIIDGILAKHFLERLCFEKGLGYFFTVVCQNSEKNNLNISSEYIDLHYFDPTSTARLENIMSKDFKQAFIYMQDE
FETKKSYEALRSLNPNLEIEIMDFWGLSVNDTHANLADARMTLSRRFMDFLPDIALTAQYIGLGVGEIMEVKIPAGSIFA
YRHISSIQQKRWRIVLIYRNSKIYFVKPSFVLEPNDSILIVGDPVVLQSIFHNIRDKAGQFPMPFGSNVFALIDMKNMNQ
NMQERVLDTTLKLTQKSNAKRFFIHVINPKLGAMYEKLKKLSEDKEGVFFDYFNTDFKQISTWLQNNDIGLVVTDIKNFE
KEKQAFFDLKIPIMKVGKASFDELKEAIILSADESELENNANVITDLSKQLDFGVILYYYNPNSQNITDMEEYFRSLSKL
YDKNIQIINKNDENPLLNLQYREDLLQFVSFQKELLNRDFGKNLSTNLNRHYYKMRQNYQLFIPVE

Sequences:

>Translated_466_residues
MNNILIIIDGILAKHFLERLCFEKGLGYFFTVVCQNSEKNNLNISSEYIDLHYFDPTSTARLENIMSKDFKQAFIYMQDE
FETKKSYEALRSLNPNLEIEIMDFWGLSVNDTHANLADARMTLSRRFMDFLPDIALTAQYIGLGVGEIMEVKIPAGSIFA
YRHISSIQQKRWRIVLIYRNSKIYFVKPSFVLEPNDSILIVGDPVVLQSIFHNIRDKAGQFPMPFGSNVFALIDMKNMNQ
NMQERVLDTTLKLTQKSNAKRFFIHVINPKLGAMYEKLKKLSEDKEGVFFDYFNTDFKQISTWLQNNDIGLVVTDIKNFE
KEKQAFFDLKIPIMKVGKASFDELKEAIILSADESELENNANVITDLSKQLDFGVILYYYNPNSQNITDMEEYFRSLSKL
YDKNIQIINKNDENPLLNLQYREDLLQFVSFQKELLNRDFGKNLSTNLNRHYYKMRQNYQLFIPVE
>Mature_466_residues
MNNILIIIDGILAKHFLERLCFEKGLGYFFTVVCQNSEKNNLNISSEYIDLHYFDPTSTARLENIMSKDFKQAFIYMQDE
FETKKSYEALRSLNPNLEIEIMDFWGLSVNDTHANLADARMTLSRRFMDFLPDIALTAQYIGLGVGEIMEVKIPAGSIFA
YRHISSIQQKRWRIVLIYRNSKIYFVKPSFVLEPNDSILIVGDPVVLQSIFHNIRDKAGQFPMPFGSNVFALIDMKNMNQ
NMQERVLDTTLKLTQKSNAKRFFIHVINPKLGAMYEKLKKLSEDKEGVFFDYFNTDFKQISTWLQNNDIGLVVTDIKNFE
KEKQAFFDLKIPIMKVGKASFDELKEAIILSADESELENNANVITDLSKQLDFGVILYYYNPNSQNITDMEEYFRSLSKL
YDKNIQIINKNDENPLLNLQYREDLLQFVSFQKELLNRDFGKNLSTNLNRHYYKMRQNYQLFIPVE

Specific function: Unknown

COG id: COG3400

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54486; Mature: 54486

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNILIIIDGILAKHFLERLCFEKGLGYFFTVVCQNSEKNNLNISSEYIDLHYFDPTSTA
CCCEEEEECHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEEEEEECCCCHH
RLENIMSKDFKQAFIYMQDEFETKKSYEALRSLNPNLEIEIMDFWGLSVNDTHANLADAR
HHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHCCCCEEEEEEEEECCEECCCCCCHHHHH
MTLSRRFMDFLPDIALTAQYIGLGVGEIMEVKIPAGSIFAYRHISSIQQKRWRIVLIYRN
HHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEC
SKIYFVKPSFVLEPNDSILIVGDPVVLQSIFHNIRDKAGQFPMPFGSNVFALIDMKNMNQ
CEEEEECCEEEECCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCC
NMQERVLDTTLKLTQKSNAKRFFIHVINPKLGAMYEKLKKLSEDKEGVFFDYFNTDFKQI
HHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHH
STWLQNNDIGLVVTDIKNFEKEKQAFFDLKIPIMKVGKASFDELKEAIILSADESELENN
HHHHCCCCCEEEEECCHHHHHHHHHHEEEECCHHHCCCCCHHHHHHHEEEECCHHHHCCC
ANVITDLSKQLDFGVILYYYNPNSQNITDMEEYFRSLSKLYDKNIQIINKNDENPLLNLQ
CHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEH
YREDLLQFVSFQKELLNRDFGKNLSTNLNRHYYKMRQNYQLFIPVE
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure
MNNILIIIDGILAKHFLERLCFEKGLGYFFTVVCQNSEKNNLNISSEYIDLHYFDPTSTA
CCCEEEEECHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEEEEEECCCCHH
RLENIMSKDFKQAFIYMQDEFETKKSYEALRSLNPNLEIEIMDFWGLSVNDTHANLADAR
HHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHCCCCEEEEEEEEECCEECCCCCCHHHHH
MTLSRRFMDFLPDIALTAQYIGLGVGEIMEVKIPAGSIFAYRHISSIQQKRWRIVLIYRN
HHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEC
SKIYFVKPSFVLEPNDSILIVGDPVVLQSIFHNIRDKAGQFPMPFGSNVFALIDMKNMNQ
CEEEEECCEEEECCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCC
NMQERVLDTTLKLTQKSNAKRFFIHVINPKLGAMYEKLKKLSEDKEGVFFDYFNTDFKQI
HHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHH
STWLQNNDIGLVVTDIKNFEKEKQAFFDLKIPIMKVGKASFDELKEAIILSADESELENN
HHHHCCCCCEEEEECCHHHHHHHHHHEEEECCHHHCCCCCHHHHHHHEEEECCHHHHCCC
ANVITDLSKQLDFGVILYYYNPNSQNITDMEEYFRSLSKLYDKNIQIINKNDENPLLNLQ
CHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEH
YREDLLQFVSFQKELLNRDFGKNLSTNLNRHYYKMRQNYQLFIPVE
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA