Click here to switch to the map view.

The map label for this gene is atpF [H]

Identifier: 153952313

GI number: 153952313

Start: 112311

End: 112823

Strand: Direct

Name: atpF [H]

Synonym: JJD26997_0110

Alternate gene names: 153952313

Gene position: 112311-112823 (Clockwise)

Preceding gene: 153951555

Following gene: 153951608

Centisome position: 6.09

GC content: 26.32

Gene sequence:

>513_bases
ATGAGTAAGTTATTCTTTATTATATTTTTGCTACCTTTGTATGCTTTTGGTGCATCAAATGGTAGTGGAGAATATGATAT
TATTCCAAGGACTATTAATTTTCTAATTTTTGTGGCTATATTGTATTATTTTGTTGCAACTCCATTTAAAAATTTTTACA
AAAACCGTATTGTAAAAATTTCTTCTAAACTTGATGAAATTCAAAAAAAACTTTTAGAAAGTAAAGCTAAGAAATTAGAT
ACAATGAAAAAACTTGAAGAAGCTAAGGCAAATGCTGCTGCCGCTTTAGCTACAGCAAAAAAAGAAGCTGAAATTTTAGT
TCAAAATATTAAGAAAGAGACTCAAGATGAGTTAGATTTACGTCAAAAACATTTTGAGGAACAGAAAGATTATGAATTTA
GAAAAATGGAAAAAGAATTAGTATCAAATACTTTAAATGAAATTTTTTCTGATCCAAATATGACATTAAAACAGAGTGAA
ATAATAGAACTGATGATGAAGAAGGTATCTTAA

Upstream 100 bases:

>100_bases
GCTGTTCAAAAAAAAGAGTTGCAAGAACATTTAAACATACATTTACCTGAGCTTAAGCAAGCTTTGCAAAATAACATAAA
GAAAATTTAAGAGGAGAGAA

Downstream 100 bases:

>100_bases
ATATGGAAAATATAATTGCAAGAAGATATGCAAAAGCGATAGCTTCAAGAGCTGATATAAATGATTTTTATCAGAATTTG
TGTATTTTAAATTCTGCTTT

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b [H]

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MSKLFFIIFLLPLYAFGASNGSGEYDIIPRTINFLIFVAILYYFVATPFKNFYKNRIVKISSKLDEIQKKLLESKAKKLD
TMKKLEEAKANAAAALATAKKEAEILVQNIKKETQDELDLRQKHFEEQKDYEFRKMEKELVSNTLNEIFSDPNMTLKQSE
IIELMMKKVS

Sequences:

>Translated_170_residues
MSKLFFIIFLLPLYAFGASNGSGEYDIIPRTINFLIFVAILYYFVATPFKNFYKNRIVKISSKLDEIQKKLLESKAKKLD
TMKKLEEAKANAAAALATAKKEAEILVQNIKKETQDELDLRQKHFEEQKDYEFRKMEKELVSNTLNEIFSDPNMTLKQSE
IIELMMKKVS
>Mature_169_residues
SKLFFIIFLLPLYAFGASNGSGEYDIIPRTINFLIFVAILYYFVATPFKNFYKNRIVKISSKLDEIQKKLLESKAKKLDT
MKKLEEAKANAAAALATAKKEAEILVQNIKKETQDELDLRQKHFEEQKDYEFRKMEKELVSNTLNEIFSDPNMTLKQSEI
IELMMKKVS

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) [H]

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002146 [H]

Pfam domain/function: PF00430 ATP-synt_B [H]

EC number: 3.6.3.14

Molecular weight: Translated: 19760; Mature: 19629

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLFFIIFLLPLYAFGASNGSGEYDIIPRTINFLIFVAILYYFVATPFKNFYKNRIVKI
CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSKLDEIQKKLLESKAKKLDTMKKLEEAKANAAAALATAKKEAEILVQNIKKETQDELDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQKHFEEQKDYEFRKMEKELVSNTLNEIFSDPNMTLKQSEIIELMMKKVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKLFFIIFLLPLYAFGASNGSGEYDIIPRTINFLIFVAILYYFVATPFKNFYKNRIVKI
CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSKLDEIQKKLLESKAKKLDTMKKLEEAKANAAAALATAKKEAEILVQNIKKETQDELDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQKHFEEQKDYEFRKMEKELVSNTLNEIFSDPNMTLKQSEIIELMMKKVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA