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The map label for this gene is flgD [C]

Identifier: 153952103

GI number: 153952103

Start: 66142

End: 67005

Strand: Direct

Name: flgD [C]

Synonym: JJD26997_0057

Alternate gene names: 153952103

Gene position: 66142-67005 (Clockwise)

Preceding gene: 153951142

Following gene: 153951334

Centisome position: 3.58

GC content: 34.38

Gene sequence:

>864_bases
ATGGCAACAACAAATTGGAATAGTAATCTTAACTGGACAAATACTACTAATACCAACCAAACAAGCGACAAGGCTACGAA
AGCGGATAATTCATCTAGCAGTAGCAGTTCTGGTGTGGTTAGCAATCCAAACGCTACCTTAGATAAAGATGCATTTTTAA
AACTTCTTTTGGTAGAACTCCAGCATCAAGATCCAACAGATCCTATGGATAGTGATAAAATGCTTACTCAAACTTCACAG
CTTAGTGCACTTGAAATGCAGCAAAATACCAATACAACCATGCAAAAAATGGTTGAAACTATGCAAAAGCTTTCTGATTC
TTTTAGTGCAAGTATGAGTACTTCGGCTTTAGGGGCTATTGGTAAAATGGCTACAGTAAATGAAAACAAAGTTAAATTAA
CAGGTGCAGATGAGGTTATTGCACTAAAAATGTATTTGCCTGAAGATTCAGATGATAAAGGAATTACTTTAGAGGTTTAT
GATAAAAATAATAAGTTGATATTTAGTGAAAAAAGTAATGAGGGAAAAGAAGTATCAAAAGGTTTATTTACATTAGAATG
GCCTGGTAGAAACAATGATGGTGTTTATGCGGGTGATGGTGAGTATACTGTTAAAATGGTTTATAATAATAAAAACGGGG
AAAAAATCACTGCAAATTATGGAACTTATCCTATAGAGGGTATTAAATTTGTTGCTGGGGTTGCTTATGCAAAAATGGGT
GGCCAATATGTAAGTTTTGATGATATTGGTGAAATTAGTGATTATAAACTTGGTTTATCTTCAACTTCCGTTGGAGATAG
TTCAAGTGGAGATTCTTCTAATTCTGGATCTACAGAAGATGGCGGTAAAGAGGAAAAGGCATAA

Upstream 100 bases:

>100_bases
GAAAAAGTCAATCTAGAGCTTGTTTTAGCGAAGTATTTCTAAGTTGGAACACTTATTGCTTTTAATTAAAAAAGACTGAA
TGTAAAAAAAGGATTTTATC

Downstream 100 bases:

>100_bases
GTCATGATGAATTCATTTTATAATGGGATTTCTGGAGTAAAAAGTAATAGCTTTGGTATTGATATCACTGCAAATAATAT
TGCCAATGTTAATACTACAG

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: Flagellar Basal Body Rod Protein; Basal-Body Rod Protein FlgD; Flagellar Biosynthesis Protein; Flagellar Hook Assembly Protein FlgD; Flagellar-Hook Assembly Protein FlgD; Flagellar Basal-Body Rod Protein FlgD; Flagellar Basal-Body Rod Protein; Flagellar Hook Assembly Protein

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MATTNWNSNLNWTNTTNTNQTSDKATKADNSSSSSSSGVVSNPNATLDKDAFLKLLLVELQHQDPTDPMDSDKMLTQTSQ
LSALEMQQNTNTTMQKMVETMQKLSDSFSASMSTSALGAIGKMATVNENKVKLTGADEVIALKMYLPEDSDDKGITLEVY
DKNNKLIFSEKSNEGKEVSKGLFTLEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKITANYGTYPIEGIKFVAGVAYAKMG
GQYVSFDDIGEISDYKLGLSSTSVGDSSSGDSSNSGSTEDGGKEEKA

Sequences:

>Translated_287_residues
MATTNWNSNLNWTNTTNTNQTSDKATKADNSSSSSSSGVVSNPNATLDKDAFLKLLLVELQHQDPTDPMDSDKMLTQTSQ
LSALEMQQNTNTTMQKMVETMQKLSDSFSASMSTSALGAIGKMATVNENKVKLTGADEVIALKMYLPEDSDDKGITLEVY
DKNNKLIFSEKSNEGKEVSKGLFTLEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKITANYGTYPIEGIKFVAGVAYAKMG
GQYVSFDDIGEISDYKLGLSSTSVGDSSSGDSSNSGSTEDGGKEEKA
>Mature_286_residues
ATTNWNSNLNWTNTTNTNQTSDKATKADNSSSSSSSGVVSNPNATLDKDAFLKLLLVELQHQDPTDPMDSDKMLTQTSQL
SALEMQQNTNTTMQKMVETMQKLSDSFSASMSTSALGAIGKMATVNENKVKLTGADEVIALKMYLPEDSDDKGITLEVYD
KNNKLIFSEKSNEGKEVSKGLFTLEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKITANYGTYPIEGIKFVAGVAYAKMGG
QYVSFDDIGEISDYKLGLSSTSVGDSSSGDSSNSGSTEDGGKEEKA

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30928; Mature: 30797

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTNWNSNLNWTNTTNTNQTSDKATKADNSSSSSSSGVVSNPNATLDKDAFLKLLLVEL
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHH
QHQDPTDPMDSDKMLTQTSQLSALEMQQNTNTTMQKMVETMQKLSDSFSASMSTSALGAI
HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GKMATVNENKVKLTGADEVIALKMYLPEDSDDKGITLEVYDKNNKLIFSEKSNEGKEVSK
HCEEECCCCEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCHHHHC
GLFTLEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKITANYGTYPIEGIKFVAGVAYAKMG
CEEEEECCCCCCCCEEECCCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHC
GQYVSFDDIGEISDYKLGLSSTSVGDSSSGDSSNSGSTEDGGKEEKA
CEEECHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATTNWNSNLNWTNTTNTNQTSDKATKADNSSSSSSSGVVSNPNATLDKDAFLKLLLVEL
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHH
QHQDPTDPMDSDKMLTQTSQLSALEMQQNTNTTMQKMVETMQKLSDSFSASMSTSALGAI
HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GKMATVNENKVKLTGADEVIALKMYLPEDSDDKGITLEVYDKNNKLIFSEKSNEGKEVSK
HCEEECCCCEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCHHHHC
GLFTLEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKITANYGTYPIEGIKFVAGVAYAKMG
CEEEEECCCCCCCCEEECCCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHC
GQYVSFDDIGEISDYKLGLSSTSVGDSSSGDSSNSGSTEDGGKEEKA
CEEECHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA