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The map label for this gene is pglC [H]

Identifier: 153952000

GI number: 153952000

Start: 540646

End: 541248

Strand: Direct

Name: pglC [H]

Synonym: JJD26997_0597

Alternate gene names: 153952000

Gene position: 540646-541248 (Clockwise)

Preceding gene: 153950979

Following gene: 153951161

Centisome position: 29.3

GC content: 32.34

Gene sequence:

>603_bases
ATGTATGAGAAATTTTTAAAAAGAATTTTTGATTTTATTTTAGCCTTGGTGCTTTTAGTGCTTTTTTCTCCTGTGATTTT
ATTCATTGCTTTACTTTTAAAGATTACTCAAGGCAGTGTGATTTTTACCCAAAATCGCCCTGGATTGAATGAAAAAATTT
TTAAAATTCATAAATTTAAAACCATGAGCGATGAAAGAGATGAGAAGGGTGAGTTATTAGGTGATGAACTTCGCTTAAAA
GCCTTTGGAAAAATCGTTAGAAGCTTAAGTTTGGATGAGCTTTTGCAACTTTTTAATGTCTTAAAAGGGGATATGAGTTT
TGTGGGGCCTAGACCTCTTTTAGTAGAGTATTTACCTCTTTACAATGAAGAGCAAAAATTGCGTCATAGAGTGCGTCCAG
GTATAACAGGATGGGCACAGGTAAATGGCAGAAATGCTATTTCTTGGCAGAAAAAATTCGAACTTGATGTGTATTATGTG
AAAAATATTTCTTTTTTGTTTGATTTAAAAATCATGTTTTTAACAGCTTTAAAGGTTTTAAAACGAAGCGGGATAAGCAA
AGAAGACCATGTTACAACGGAGAAATTTAATGGTAAGAACTGA

Upstream 100 bases:

>100_bases
AGACTCAATTTAGGAAAAAATGCCGCCCAAGATGCTTTACAATACGATGAAAATATTATCGCACAGCGTTATTTAAAACT
TTATGATAGGGTAATGAAGA

Downstream 100 bases:

>100_bases
TAAAATTTATATTTATGCTGCTAGTGGACATGGGTTTGTTTGTGAAGATGTGGCTAAAAATATGGGCTATAAAGAATGTA
TTTTTTTAGATGATTTTAAA

Product: general glycosylation pathway protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MYEKFLKRIFDFILALVLLVLFSPVILFIALLLKITQGSVIFTQNRPGLNEKIFKIHKFKTMSDERDEKGELLGDELRLK
AFGKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLPLYNEEQKLRHRVRPGITGWAQVNGRNAISWQKKFELDVYYV
KNISFLFDLKIMFLTALKVLKRSGISKEDHVTTEKFNGKN

Sequences:

>Translated_200_residues
MYEKFLKRIFDFILALVLLVLFSPVILFIALLLKITQGSVIFTQNRPGLNEKIFKIHKFKTMSDERDEKGELLGDELRLK
AFGKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLPLYNEEQKLRHRVRPGITGWAQVNGRNAISWQKKFELDVYYV
KNISFLFDLKIMFLTALKVLKRSGISKEDHVTTEKFNGKN
>Mature_200_residues
MYEKFLKRIFDFILALVLLVLFSPVILFIALLLKITQGSVIFTQNRPGLNEKIFKIHKFKTMSDERDEKGELLGDELRLK
AFGKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLPLYNEEQKLRHRVRPGITGWAQVNGRNAISWQKKFELDVYYV
KNISFLFDLKIMFLTALKVLKRSGISKEDHVTTEKFNGKN

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=187, Percent_Identity=41.7112299465241, Blast_Score=134, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 23283; Mature: 23283

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEKFLKRIFDFILALVLLVLFSPVILFIALLLKITQGSVIFTQNRPGLNEKIFKIHKFK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHH
TMSDERDEKGELLGDELRLKAFGKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLPL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHCC
YNEEQKLRHRVRPGITGWAQVNGRNAISWQKKFELDVYYVKNISFLFDLKIMFLTALKVL
CCHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHH
KRSGISKEDHVTTEKFNGKN
HHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYEKFLKRIFDFILALVLLVLFSPVILFIALLLKITQGSVIFTQNRPGLNEKIFKIHKFK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHH
TMSDERDEKGELLGDELRLKAFGKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLPL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHCC
YNEEQKLRHRVRPGITGWAQVNGRNAISWQKKFELDVYYVKNISFLFDLKIMFLTALKVL
CCHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHH
KRSGISKEDHVTTEKFNGKN
HHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]