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The map label for this gene is rprY [H]

Identifier: 153951896

GI number: 153951896

Start: 450616

End: 451281

Strand: Direct

Name: rprY [H]

Synonym: JJD26997_0504

Alternate gene names: 153951896

Gene position: 450616-451281 (Clockwise)

Preceding gene: 153951991

Following gene: 153951570

Centisome position: 24.42

GC content: 29.73

Gene sequence:

>666_bases
ATGGCTGCTAAAATTTTACTTTTAGAAGATGATTTGAGCTTGAGTGAGATCATTGAAGAGTTTTTAAACGATGAAGGATA
TGAAGTATTTTTATGCGATAATGTACAAGAAGCTTTAGATATGGCTTATGAAAGATATTTTGATCTTTGGATTTTAGATG
TAAAAGTTCCTTTAGGAGATGGATTTTCATTACTTAAAGAATTAAGAAAAAGCGGAAAGCAAACTCCAGCAATTTTCATG
ACTTCTTTAAACACAACAAACGATTTAAAACAAGGCTTTGACGCAGGTTGTGATGATTATATAAAAAAACCTTTTGAACT
TGTCGAGTTATCTATCAGGGTTAAAGCTTTGCTTAAAAGAGCTTTTTCACATAAAAATGAAGATTTTGAAGATTTAGGAG
ATGGATTTAGATTTGAATTTACTACACAAATTCTTTACCATAATAATAAAGCCTTGACTTTACCGAGTAAAGAAATTAAG
CTTTTGTCTTTATTGCTTAAAAATAAAAACAACTTTTTAAGCACAGAGAGAATTTTTGAAGAACTCTGGGATTATGATGA
GGAGCCTAGTGATCTAAGTTTAACGGCTTATGTGAAAAATTTACGTAAAATTTTAGGAAAAGAAAAAATTATAAATCAAA
GAGGCAGGGGATATTGCTATGGCTAA

Upstream 100 bases:

>100_bases
AAAATAAATTAAATAAAAATGAAATTTTATTAAATAATTGATAAGAATTTTGATGCAATGATATATATTTAAGAGATTTG
AAGTTAGAAAGATTTAAATT

Downstream 100 bases:

>100_bases
AAAAGTCATTAGGCAAATTTTATTAATTTACCTAACAACTACAGGTATTTTTTTAACTATTTTTTTTGCATTATGGTATC
AAAAATTATATGAAGAATTG

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MAAKILLLEDDLSLSEIIEEFLNDEGYEVFLCDNVQEALDMAYERYFDLWILDVKVPLGDGFSLLKELRKSGKQTPAIFM
TSLNTTNDLKQGFDAGCDDYIKKPFELVELSIRVKALLKRAFSHKNEDFEDLGDGFRFEFTTQILYHNNKALTLPSKEIK
LLSLLLKNKNNFLSTERIFEELWDYDEEPSDLSLTAYVKNLRKILGKEKIINQRGRGYCYG

Sequences:

>Translated_221_residues
MAAKILLLEDDLSLSEIIEEFLNDEGYEVFLCDNVQEALDMAYERYFDLWILDVKVPLGDGFSLLKELRKSGKQTPAIFM
TSLNTTNDLKQGFDAGCDDYIKKPFELVELSIRVKALLKRAFSHKNEDFEDLGDGFRFEFTTQILYHNNKALTLPSKEIK
LLSLLLKNKNNFLSTERIFEELWDYDEEPSDLSLTAYVKNLRKILGKEKIINQRGRGYCYG
>Mature_220_residues
AAKILLLEDDLSLSEIIEEFLNDEGYEVFLCDNVQEALDMAYERYFDLWILDVKVPLGDGFSLLKELRKSGKQTPAIFMT
SLNTTNDLKQGFDAGCDDYIKKPFELVELSIRVKALLKRAFSHKNEDFEDLGDGFRFEFTTQILYHNNKALTLPSKEIKL
LSLLLKNKNNFLSTERIFEELWDYDEEPSDLSLTAYVKNLRKILGKEKIINQRGRGYCYG

Specific function: Member of the two-component regulatory system rprX/rprY [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=218, Percent_Identity=30.7339449541284, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1790552, Length=220, Percent_Identity=33.1818181818182, Blast_Score=110, Evalue=6e-26,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=30.7692307692308, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1786599, Length=226, Percent_Identity=26.1061946902655, Blast_Score=101, Evalue=3e-23,
Organism=Escherichia coli, GI1786784, Length=220, Percent_Identity=29.5454545454545, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1786911, Length=225, Percent_Identity=26.6666666666667, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI1789809, Length=208, Percent_Identity=25.9615384615385, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI2367329, Length=227, Percent_Identity=31.2775330396476, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=28.9592760180996, Blast_Score=87, Evalue=6e-19,
Organism=Escherichia coli, GI1787229, Length=225, Percent_Identity=26.2222222222222, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=24.4343891402715, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1788394, Length=209, Percent_Identity=27.2727272727273, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1790863, Length=231, Percent_Identity=24.6753246753247, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1790437, Length=122, Percent_Identity=30.327868852459, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI1788550, Length=116, Percent_Identity=28.448275862069, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790299, Length=123, Percent_Identity=28.4552845528455, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25621; Mature: 25489

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAKILLLEDDLSLSEIIEEFLNDEGYEVFLCDNVQEALDMAYERYFDLWILDVKVPLGD
CCEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHEEEEEEEECCCC
GFSLLKELRKSGKQTPAIFMTSLNTTNDLKQGFDAGCDDYIKKPFELVELSIRVKALLKR
CHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHH
AFSHKNEDFEDLGDGFRFEFTTQILYHNNKALTLPSKEIKLLSLLLKNKNNFLSTERIFE
HHHCCCCCHHHHCCCCEEEEEEEEEEECCEEEECCHHHHHHHHHHHHCCCCCHHHHHHHH
ELWDYDEEPSDLSLTAYVKNLRKILGKEKIINQRGRGYCYG
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AAKILLLEDDLSLSEIIEEFLNDEGYEVFLCDNVQEALDMAYERYFDLWILDVKVPLGD
CEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHEEEEEEEECCCC
GFSLLKELRKSGKQTPAIFMTSLNTTNDLKQGFDAGCDDYIKKPFELVELSIRVKALLKR
CHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHH
AFSHKNEDFEDLGDGFRFEFTTQILYHNNKALTLPSKEIKLLSLLLKNKNNFLSTERIFE
HHHCCCCCHHHHCCCCEEEEEEEEEEECCEEEECCHHHHHHHHHHHHCCCCCHHHHHHHH
ELWDYDEEPSDLSLTAYVKNLRKILGKEKIINQRGRGYCYG
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8469117 [H]