| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
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The map label for this gene is 153951705
Identifier: 153951705
GI number: 153951705
Start: 1391814
End: 1392746
Strand: Direct
Name: 153951705
Synonym: JJD26997_1573
Alternate gene names: NA
Gene position: 1391814-1392746 (Clockwise)
Preceding gene: 153950987
Following gene: 153952090
Centisome position: 75.43
GC content: 31.73
Gene sequence:
>933_bases ATGCTAAAAGTAATCAAGCATAATTTAGGAATTTATTTCATGATTTTAGCATGTTTGGATTTTGCACTTATGGGAGCTTG CGCAAAAATTCTTAGCAAAGAAATGAGTTCTATAGAAATTATGTTTTTTAGAAATATCATAGGAATTTTTTTCATAGTCT ATCTTTTAAAACGATCTAAGGCGCATAAAGAAGGAGGACATTTTTGGCTCTTGGTATTTCGTGGAGTAGTAGGCACGCTT TCACTTTATATGTTTTTCTATAATGTTTCAAATATTACACTAGGCGGAGCTTTTGCTTTTCAAAAAACTGCTCCTATTTT TATTACTTTAATAGCTTTTGTTGTTTTTAAAGAAAATATTGGTATCAAAGGCTGGATAGGAATTTTAATAGCATTTGGTG GAGTGCTTTTAATCGCTCAGCCTTGGGCTCATAATTTAAATCATTCAGGCTTTGATTTAAAAAATTCAGTTATAGGCATC ACGAGTGGATTTTTAGCCGCTTTAGCTCTTACAAGTGTAAGAGAACTTAGAAAATCTTACACTACAGAACAAATTGCCTT TTCTTTTATCCTTTTAGGAACCTTAATGCCTTTAATTTCTATGATCAGTGCTGAATTTTTTGAACCACAGCATCTTGATT CTTTACATTTAGATTTCATTCTAGCACCTTTTGTGATGCCAAGTTTTACAGCTTGGCTTATCATTGCCATTATGGGAACT TTAGGCACCATTTATCAAATTCATGTCACCAAAGCTTATGGTATCGCTAAACAAGCAGGAGTAGTTGCCGGAGTTAGTTA TCTTGATGTAGTATTTAGTATGATAGTTGGGATAATTTTAGGAGATAATTTACCAAGTACTATGGTTTTTTTAGGTATAA TAAGCATTATTTTTGGTGGATTAATTTTAGTTAAGAACAAAGGAAAAAAATGA
Upstream 100 bases:
>100_bases TTTTTTCCTAGAAAATTATATTTTTAAAATTATATAAAATTTGGCTTAATATTAAGCAAAAAAAGACTAGAATTAGCCTA GATTTTAATCAAGGAAAAAA
Downstream 100 bases:
>100_bases AAAAAATGATACTCATTGCTGGTCCTTGTGTGATAGAAAGCAAAGATTTGATTTTTAAAGTTGCCAAACAATTAAAAAAT TTTAATGAGAATCCAAATAT
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MLKVIKHNLGIYFMILACLDFALMGACAKILSKEMSSIEIMFFRNIIGIFFIVYLLKRSKAHKEGGHFWLLVFRGVVGTL SLYMFFYNVSNITLGGAFAFQKTAPIFITLIAFVVFKENIGIKGWIGILIAFGGVLLIAQPWAHNLNHSGFDLKNSVIGI TSGFLAALALTSVRELRKSYTTEQIAFSFILLGTLMPLISMISAEFFEPQHLDSLHLDFILAPFVMPSFTAWLIIAIMGT LGTIYQIHVTKAYGIAKQAGVVAGVSYLDVVFSMIVGIILGDNLPSTMVFLGIISIIFGGLILVKNKGKK
Sequences:
>Translated_310_residues MLKVIKHNLGIYFMILACLDFALMGACAKILSKEMSSIEIMFFRNIIGIFFIVYLLKRSKAHKEGGHFWLLVFRGVVGTL SLYMFFYNVSNITLGGAFAFQKTAPIFITLIAFVVFKENIGIKGWIGILIAFGGVLLIAQPWAHNLNHSGFDLKNSVIGI TSGFLAALALTSVRELRKSYTTEQIAFSFILLGTLMPLISMISAEFFEPQHLDSLHLDFILAPFVMPSFTAWLIIAIMGT LGTIYQIHVTKAYGIAKQAGVVAGVSYLDVVFSMIVGIILGDNLPSTMVFLGIISIIFGGLILVKNKGKK >Mature_310_residues MLKVIKHNLGIYFMILACLDFALMGACAKILSKEMSSIEIMFFRNIIGIFFIVYLLKRSKAHKEGGHFWLLVFRGVVGTL SLYMFFYNVSNITLGGAFAFQKTAPIFITLIAFVVFKENIGIKGWIGILIAFGGVLLIAQPWAHNLNHSGFDLKNSVIGI TSGFLAALALTSVRELRKSYTTEQIAFSFILLGTLMPLISMISAEFFEPQHLDSLHLDFILAPFVMPSFTAWLIIAIMGT LGTIYQIHVTKAYGIAKQAGVVAGVSYLDVVFSMIVGIILGDNLPSTMVFLGIISIIFGGLILVKNKGKK
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 34121; Mature: 34121
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKVIKHNLGIYFMILACLDFALMGACAKILSKEMSSIEIMFFRNIIGIFFIVYLLKRSK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHKEGGHFWLLVFRGVVGTLSLYMFFYNVSNITLGGAFAFQKTAPIFITLIAFVVFKENI CCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHCCCHHHHHHHHHHHHHHCC GIKGWIGILIAFGGVLLIAQPWAHNLNHSGFDLKNSVIGITSGFLAALALTSVRELRKSY CCHHHHHHHHHHCCHHEEECCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TTEQIAFSFILLGTLMPLISMISAEFFEPQHLDSLHLDFILAPFVMPSFTAWLIIAIMGT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGTIYQIHVTKAYGIAKQAGVVAGVSYLDVVFSMIVGIILGDNLPSTMVFLGIISIIFGG HHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC LILVKNKGKK EEEEECCCCC >Mature Secondary Structure MLKVIKHNLGIYFMILACLDFALMGACAKILSKEMSSIEIMFFRNIIGIFFIVYLLKRSK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHKEGGHFWLLVFRGVVGTLSLYMFFYNVSNITLGGAFAFQKTAPIFITLIAFVVFKENI CCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHCCCHHHHHHHHHHHHHHCC GIKGWIGILIAFGGVLLIAQPWAHNLNHSGFDLKNSVIGITSGFLAALALTSVRELRKSY CCHHHHHHHHHHCCHHEEECCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TTEQIAFSFILLGTLMPLISMISAEFFEPQHLDSLHLDFILAPFVMPSFTAWLIIAIMGT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGTIYQIHVTKAYGIAKQAGVVAGVSYLDVVFSMIVGIILGDNLPSTMVFLGIISIIFGG HHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC LILVKNKGKK EEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]