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The map label for this gene is ynaI [C]

Identifier: 153951689

GI number: 153951689

Start: 218986

End: 220869

Strand: Direct

Name: ynaI [C]

Synonym: JJD26997_0236

Alternate gene names: 153951689

Gene position: 218986-220869 (Clockwise)

Preceding gene: 153952251

Following gene: 153950939

Centisome position: 11.87

GC content: 27.97

Gene sequence:

>1884_bases
ATGAAAAAAATTATTTTTAGTTTATGTTTTTTTATTTTATACCTTGGAGCACAAGAATTTAAATTTATTGATGCAAATAT
TAGTAAAGAAGATGAAGGAATTTATGCTTTAGTTGAAAAATATGTTGATCTTAACAATCAAATTAAAGAATTTAAGAAAA
ACAATGATGAAAATTCTAGCACTTTTAATGGTATTTTAAGTGAATTTGAAAAAGACAAAAAGACTATTTTAGCAAAAATA
CCCGATATGATAGTAGGGCAAAAGATCAATGAAGAGGCAGTGGCTAGATTTTTAAAAGCAAAAGAAAAATTGCTAGATGT
TCAAAAAAAGAATATTAATAAGCCTTATATTTATACAGATGCCACTCTTAATCTAGTTTATTTTAATATTGTGGAAAGTT
TTTATTCTTCTTTGTTTGAAGTGGAAAAACTTTTTAAAAATACAGCAAGCAGTGAAGATTTGATTGCTACTGTTGATAAG
GCAATGGAAAATTTACAAAATTCTTCTAATGTTAATTTAGATAGTTTTAAAAGCAAAATTACAAATCCAGAAGAATTAGA
AAAAATTACCCTAAAAGAAAGATATATCAGTAATGCTGTAGATTCTTATTCTGAAATTCTTAAGTATTTACGCTCAAATG
CAGATTTGCTTGAAAGTAATTATATTTTTTCATTACTTGAGCTTCAAGTTTGGATAGATCGTATAAATGAGGCAATTGGA
GTAGGTTTCATTAATATCGGAAAAATAGTAATTTCTGCTTTGGTTTTAGTATTTTTTATATCTTTAAGATGTTTTTTTGC
AAATATAGTATATTTTTTCCTTGTTCAACTTTTTTATAGGGATAAAAATGATGTAGATGATATTAAAGTTATTGTTATTG
AGAATATCAAAAAACCAGTAGGTTTTTTTCTGATTGTTTACGCTATTTCAATTTGCCTTACTATAGCAACTTACCCTGCA
CCTTTAAGTATCAATTTAAGTAATTTTTTTCATATAGTTTATGCAGTTTTAATTGCATGGCTTATTTTGAAAATGCTTGA
TGGTTATGGAATGGTGCTAGTTTCTAAGCTTGCTCAAAAAAGCGGAAAAAAAGAAGTTGTGAATTTAATTATTAAAATTT
TATATTTTGTTATTATTATCATAGCTTTATTATATATTCTTGCTCAGCTTGGCTTTAATATTTCAGCTATTATTGCATCT
TTGGGAATTGGTGGTTTGGCTGTTGCTTTAGCAGCGAAAGATATAATTGCAAATTTCTTTGCTTCCATACTCTTACTTTT
TGATAATAGCTTTAATCAAGGAGATTGGGTAGAGGTTTCAGGCATAGAAGGAACCGTGGTTGAAATAGGACTTAGAAAAA
CTACTATTAGAACTTTTGATAATTGTCTTGTATTTTTACCAAATTCAACTATTATGGGAGCTAATATCAAAAATTGGAGT
AAAAGACGCATGGGTCGCCATGTTAGAATGTATTTGGGTGTTGGTTATGATGCTACTCCCGAAAAACTAGAACAATGCGT
AAAAGATTTAAGAGAATTTTTGCATACAAGTGATTTAGTGGCTCACGATGAGGATAGCGCATTAAAATATGGCGATCATA
CAACAAAATATCGTCAAAATCTTGTATCTATTAATGATTTAGAAGGCTATAAAAATGCTTGTTATGTGGCTTTAAGTGAA
TTTGCAGATAGTAGTATTAATATAGAGCTTTATTTTTATACCAAAGAAATAGGCGGAAAAGATTTTAGAGAAGCTAGACA
AAGTTTAATGCTTGAGTTTATGCGTATAATTGAAAAAAATGGTTTAACCTTTGCTTTCCCAAGTCGTAGTATTTATATAG
AAAATTTACCACCCCTTGATTTGCAAGCAAAAGCTATAAAATAG

Upstream 100 bases:

>100_bases
TAGAAGTACATGCTTGGTATTATATTATAGAGACAGGTGAAATTTATGAGTATGATTTTAAAGCAAAAATTTTTACTTTA
ATACAGGATAGGAAAGTTCA

Downstream 100 bases:

>100_bases
CAAGATTTTATCTTGCTATTTTTTTAAACCGGCATAACACGTATATTTGGGCTTAATTCTTCTTGTAAAATCGTTTCAAT
AGCATAAAGTGTTGCACCAC

Product: mechanosensitive ion channel family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 627; Mature: 627

Protein sequence:

>627_residues
MKKIIFSLCFFILYLGAQEFKFIDANISKEDEGIYALVEKYVDLNNQIKEFKKNNDENSSTFNGILSEFEKDKKTILAKI
PDMIVGQKINEEAVARFLKAKEKLLDVQKKNINKPYIYTDATLNLVYFNIVESFYSSLFEVEKLFKNTASSEDLIATVDK
AMENLQNSSNVNLDSFKSKITNPEELEKITLKERYISNAVDSYSEILKYLRSNADLLESNYIFSLLELQVWIDRINEAIG
VGFINIGKIVISALVLVFFISLRCFFANIVYFFLVQLFYRDKNDVDDIKVIVIENIKKPVGFFLIVYAISICLTIATYPA
PLSINLSNFFHIVYAVLIAWLILKMLDGYGMVLVSKLAQKSGKKEVVNLIIKILYFVIIIIALLYILAQLGFNISAIIAS
LGIGGLAVALAAKDIIANFFASILLLFDNSFNQGDWVEVSGIEGTVVEIGLRKTTIRTFDNCLVFLPNSTIMGANIKNWS
KRRMGRHVRMYLGVGYDATPEKLEQCVKDLREFLHTSDLVAHDEDSALKYGDHTTKYRQNLVSINDLEGYKNACYVALSE
FADSSINIELYFYTKEIGGKDFREARQSLMLEFMRIIEKNGLTFAFPSRSIYIENLPPLDLQAKAIK

Sequences:

>Translated_627_residues
MKKIIFSLCFFILYLGAQEFKFIDANISKEDEGIYALVEKYVDLNNQIKEFKKNNDENSSTFNGILSEFEKDKKTILAKI
PDMIVGQKINEEAVARFLKAKEKLLDVQKKNINKPYIYTDATLNLVYFNIVESFYSSLFEVEKLFKNTASSEDLIATVDK
AMENLQNSSNVNLDSFKSKITNPEELEKITLKERYISNAVDSYSEILKYLRSNADLLESNYIFSLLELQVWIDRINEAIG
VGFINIGKIVISALVLVFFISLRCFFANIVYFFLVQLFYRDKNDVDDIKVIVIENIKKPVGFFLIVYAISICLTIATYPA
PLSINLSNFFHIVYAVLIAWLILKMLDGYGMVLVSKLAQKSGKKEVVNLIIKILYFVIIIIALLYILAQLGFNISAIIAS
LGIGGLAVALAAKDIIANFFASILLLFDNSFNQGDWVEVSGIEGTVVEIGLRKTTIRTFDNCLVFLPNSTIMGANIKNWS
KRRMGRHVRMYLGVGYDATPEKLEQCVKDLREFLHTSDLVAHDEDSALKYGDHTTKYRQNLVSINDLEGYKNACYVALSE
FADSSINIELYFYTKEIGGKDFREARQSLMLEFMRIIEKNGLTFAFPSRSIYIENLPPLDLQAKAIK
>Mature_627_residues
MKKIIFSLCFFILYLGAQEFKFIDANISKEDEGIYALVEKYVDLNNQIKEFKKNNDENSSTFNGILSEFEKDKKTILAKI
PDMIVGQKINEEAVARFLKAKEKLLDVQKKNINKPYIYTDATLNLVYFNIVESFYSSLFEVEKLFKNTASSEDLIATVDK
AMENLQNSSNVNLDSFKSKITNPEELEKITLKERYISNAVDSYSEILKYLRSNADLLESNYIFSLLELQVWIDRINEAIG
VGFINIGKIVISALVLVFFISLRCFFANIVYFFLVQLFYRDKNDVDDIKVIVIENIKKPVGFFLIVYAISICLTIATYPA
PLSINLSNFFHIVYAVLIAWLILKMLDGYGMVLVSKLAQKSGKKEVVNLIIKILYFVIIIIALLYILAQLGFNISAIIAS
LGIGGLAVALAAKDIIANFFASILLLFDNSFNQGDWVEVSGIEGTVVEIGLRKTTIRTFDNCLVFLPNSTIMGANIKNWS
KRRMGRHVRMYLGVGYDATPEKLEQCVKDLREFLHTSDLVAHDEDSALKYGDHTTKYRQNLVSINDLEGYKNACYVALSE
FADSSINIELYFYTKEIGGKDFREARQSLMLEFMRIIEKNGLTFAFPSRSIYIENLPPLDLQAKAIK

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=256, Percent_Identity=33.984375, Blast_Score=138, Evalue=1e-33,
Organism=Escherichia coli, GI1789291, Length=242, Percent_Identity=25.2066115702479, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1786670, Length=189, Percent_Identity=26.984126984127, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 71334; Mature: 71334

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIFSLCFFILYLGAQEFKFIDANISKEDEGIYALVEKYVDLNNQIKEFKKNNDENSS
CHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCH
TFNGILSEFEKDKKTILAKIPDMIVGQKINEEAVARFLKAKEKLLDVQKKNINKPYIYTD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
ATLNLVYFNIVESFYSSLFEVEKLFKNTASSEDLIATVDKAMENLQNSSNVNLDSFKSKI
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHC
TNPEELEKITLKERYISNAVDSYSEILKYLRSNADLLESNYIFSLLELQVWIDRINEAIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
VGFINIGKIVISALVLVFFISLRCFFANIVYFFLVQLFYRDKNDVDDIKVIVIENIKKPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCCHHH
GFFLIVYAISICLTIATYPAPLSINLSNFFHIVYAVLIAWLILKMLDGYGMVLVSKLAQK
HHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SGKKEVVNLIIKILYFVIIIIALLYILAQLGFNISAIIASLGIGGLAVALAAKDIIANFF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
ASILLLFDNSFNQGDWVEVSGIEGTVVEIGLRKTTIRTFDNCLVFLPNSTIMGANIKNWS
HHHHHHHCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHCCEEEECCCCEEECCCCCHHH
KRRMGRHVRMYLGVGYDATPEKLEQCVKDLREFLHTSDLVAHDEDSALKYGDHTTKYRQN
HHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
LVSINDLEGYKNACYVALSEFADSSINIELYFYTKEIGGKDFREARQSLMLEFMRIIEKN
CCCCHHCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
GLTFAFPSRSIYIENLPPLDLQAKAIK
CCEEEECCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKKIIFSLCFFILYLGAQEFKFIDANISKEDEGIYALVEKYVDLNNQIKEFKKNNDENSS
CHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCH
TFNGILSEFEKDKKTILAKIPDMIVGQKINEEAVARFLKAKEKLLDVQKKNINKPYIYTD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
ATLNLVYFNIVESFYSSLFEVEKLFKNTASSEDLIATVDKAMENLQNSSNVNLDSFKSKI
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHC
TNPEELEKITLKERYISNAVDSYSEILKYLRSNADLLESNYIFSLLELQVWIDRINEAIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
VGFINIGKIVISALVLVFFISLRCFFANIVYFFLVQLFYRDKNDVDDIKVIVIENIKKPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCCHHH
GFFLIVYAISICLTIATYPAPLSINLSNFFHIVYAVLIAWLILKMLDGYGMVLVSKLAQK
HHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SGKKEVVNLIIKILYFVIIIIALLYILAQLGFNISAIIASLGIGGLAVALAAKDIIANFF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
ASILLLFDNSFNQGDWVEVSGIEGTVVEIGLRKTTIRTFDNCLVFLPNSTIMGANIKNWS
HHHHHHHCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHCCEEEECCCCEEECCCCCHHH
KRRMGRHVRMYLGVGYDATPEKLEQCVKDLREFLHTSDLVAHDEDSALKYGDHTTKYRQN
HHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
LVSINDLEGYKNACYVALSEFADSSINIELYFYTKEIGGKDFREARQSLMLEFMRIIEKN
CCCCHHCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
GLTFAFPSRSIYIENLPPLDLQAKAIK
CCEEEECCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]