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The map label for this gene is yedE [H]

Identifier: 153951496

GI number: 153951496

Start: 1626015

End: 1627223

Strand: Direct

Name: yedE [H]

Synonym: JJD26997_1848

Alternate gene names: 153951496

Gene position: 1626015-1627223 (Clockwise)

Preceding gene: 153952207

Following gene: 153952297

Centisome position: 88.13

GC content: 31.51

Gene sequence:

>1209_bases
TTGAATTCTTTTAAACAAAAATATTTAATCAATTTTTGGGACAATTCCCGTTCTATGATTGCACTTGGAATTTTAAGTGC
AGTGTATTTTGGGATTTTTGGTGGCGTTTGGGCTGTTACTGGAGAAATGACACGTTGGGGTGGTGAATTTTTAGAACTTT
TAGGTATGAATTTAGATGGATATTCTTATTACCAAAAGCAAAATTTAAATGGAACCCCTTTAACAAGAACTGATGGTATT
ATGCTCATAGGTATGTTTATGGGTTGTTTAGTAGCCGCACTTTTAGCTAATAAAGTCAAATTTCGTCTACCTGCTAGCAA
TATAAGAATTTTTCAAGCAATAGTAGGTGGAATTCTTTCAGGATATGGAGCAAGACTTGCATTTGGATGCAATTTAGCTA
ATTTTTTTACAGGTTTGCCTTATTTTTCTTTACACACTTGGCTTTTTACTGTTTTTATGATTTTAGGAATTTATCTAGGA
GTAAAAATTTGCAACACTTCCTTTTTTAAACCTAAAGCTAAATTAGAACGGGTTGATAAAGAAAATCTACCATTAAATAA
ACAAAGTTTGCGTACAAAACTATATTTTAACTTAGGCATATTGCTTTTCATAGCCTTTTTAGTTTGGGTGTTTTATCTTG
TTTTTACAAATGGTAATATCAGCACACAAAACAAACAAAGTCTTCTAGCTTTAGCACTGATTTTTGGTTTTGTTTTTGGC
TTTGTTATTTCTAGGGGGCAAATTTGTTTTACTTCTTGCTTTAGAGATTTATTTTTATTTGGTAGAAACAATGCCATAAA
AGGCGCATTACTCGGCATGATTATCGCCTCTTTAATCGCTTTTGCTTTTATCTTGCAAGGTCATACTAGCAAACTCATAG
AACTTTCTCCTGCTGTAGCTGTGGGAGCATTTTTGTTTGGTTTTGGTATAGTTTTAGCCGGAGGTTGCGAGTGTGGTTGG
ACTTATCGTGCCTTTGAAGGACAAAGTCATTTTATGATAGTAGGAATTGCAAACATAATAGGAACTATGATTTTAGCTTT
AAGTTATGACTTTTTACCAAAGGCTCTTAAAGAAGGTATAAAAATCAATCTTTTAACTGAATTTGGAAATTTAAATGGAT
TTTTTATCAACCTTGTTTTATTTATCCTAATGTTTGCTTTTGTAGTATTTTATAAAAAACACTTCTTTAAAAATCAACTT
AAAGGATAA

Upstream 100 bases:

>100_bases
AAATTTATTAATATTCTTTTTGACTTCATATTAAATTTAAGCTATAATCTCACTCTTTTTTAGCATCAAGTTTTGATGAT
TACATTTTTAGGATCTTTCT

Downstream 100 bases:

>100_bases
ACAATGAAAATTACTTATAGTTTAAATTTGCAAGGTGAAGCTTGCCCTTATCCTGCTATAGCAACACTTGATGTTTTACC
TCAACTTCAAAGCGGAGAAA

Product: putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MNSFKQKYLINFWDNSRSMIALGILSAVYFGIFGGVWAVTGEMTRWGGEFLELLGMNLDGYSYYQKQNLNGTPLTRTDGI
MLIGMFMGCLVAALLANKVKFRLPASNIRIFQAIVGGILSGYGARLAFGCNLANFFTGLPYFSLHTWLFTVFMILGIYLG
VKICNTSFFKPKAKLERVDKENLPLNKQSLRTKLYFNLGILLFIAFLVWVFYLVFTNGNISTQNKQSLLALALIFGFVFG
FVISRGQICFTSCFRDLFLFGRNNAIKGALLGMIIASLIAFAFILQGHTSKLIELSPAVAVGAFLFGFGIVLAGGCECGW
TYRAFEGQSHFMIVGIANIIGTMILALSYDFLPKALKEGIKINLLTEFGNLNGFFINLVLFILMFAFVVFYKKHFFKNQL
KG

Sequences:

>Translated_402_residues
MNSFKQKYLINFWDNSRSMIALGILSAVYFGIFGGVWAVTGEMTRWGGEFLELLGMNLDGYSYYQKQNLNGTPLTRTDGI
MLIGMFMGCLVAALLANKVKFRLPASNIRIFQAIVGGILSGYGARLAFGCNLANFFTGLPYFSLHTWLFTVFMILGIYLG
VKICNTSFFKPKAKLERVDKENLPLNKQSLRTKLYFNLGILLFIAFLVWVFYLVFTNGNISTQNKQSLLALALIFGFVFG
FVISRGQICFTSCFRDLFLFGRNNAIKGALLGMIIASLIAFAFILQGHTSKLIELSPAVAVGAFLFGFGIVLAGGCECGW
TYRAFEGQSHFMIVGIANIIGTMILALSYDFLPKALKEGIKINLLTEFGNLNGFFINLVLFILMFAFVVFYKKHFFKNQL
KG
>Mature_402_residues
MNSFKQKYLINFWDNSRSMIALGILSAVYFGIFGGVWAVTGEMTRWGGEFLELLGMNLDGYSYYQKQNLNGTPLTRTDGI
MLIGMFMGCLVAALLANKVKFRLPASNIRIFQAIVGGILSGYGARLAFGCNLANFFTGLPYFSLHTWLFTVFMILGIYLG
VKICNTSFFKPKAKLERVDKENLPLNKQSLRTKLYFNLGILLFIAFLVWVFYLVFTNGNISTQNKQSLLALALIFGFVFG
FVISRGQICFTSCFRDLFLFGRNNAIKGALLGMIIASLIAFAFILQGHTSKLIELSPAVAVGAFLFGFGIVLAGGCECGW
TYRAFEGQSHFMIVGIANIIGTMILALSYDFLPKALKEGIKINLLTEFGNLNGFFINLVLFILMFAFVVFYKKHFFKNQL
KG

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

Organism=Escherichia coli, GI1788238, Length=398, Percent_Identity=44.2211055276382, Blast_Score=331, Evalue=6e-92,
Organism=Escherichia coli, GI1788323, Length=103, Percent_Identity=37.8640776699029, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 44870; Mature: 44870

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSFKQKYLINFWDNSRSMIALGILSAVYFGIFGGVWAVTGEMTRWGGEFLELLGMNLDG
CCCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCC
YSYYQKQNLNGTPLTRTDGIMLIGMFMGCLVAALLANKVKFRLPASNIRIFQAIVGGILS
CHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHH
GYGARLAFGCNLANFFTGLPYFSLHTWLFTVFMILGIYLGVKICNTSFFKPKAKLERVDK
CCCCHHEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
ENLPLNKQSLRTKLYFNLGILLFIAFLVWVFYLVFTNGNISTQNKQSLLALALIFGFVFG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
FVISRGQICFTSCFRDLFLFGRNNAIKGALLGMIIASLIAFAFILQGHTSKLIELSPAVA
HHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHH
VGAFLFGFGIVLAGGCECGWTYRAFEGQSHFMIVGIANIIGTMILALSYDFLPKALKEGI
HHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCC
KINLLTEFGNLNGFFINLVLFILMFAFVVFYKKHFFKNQLKG
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSFKQKYLINFWDNSRSMIALGILSAVYFGIFGGVWAVTGEMTRWGGEFLELLGMNLDG
CCCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCC
YSYYQKQNLNGTPLTRTDGIMLIGMFMGCLVAALLANKVKFRLPASNIRIFQAIVGGILS
CHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHH
GYGARLAFGCNLANFFTGLPYFSLHTWLFTVFMILGIYLGVKICNTSFFKPKAKLERVDK
CCCCHHEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
ENLPLNKQSLRTKLYFNLGILLFIAFLVWVFYLVFTNGNISTQNKQSLLALALIFGFVFG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
FVISRGQICFTSCFRDLFLFGRNNAIKGALLGMIIASLIAFAFILQGHTSKLIELSPAVA
HHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHH
VGAFLFGFGIVLAGGCECGWTYRAFEGQSHFMIVGIANIIGTMILALSYDFLPKALKEGI
HHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCC
KINLLTEFGNLNGFFINLVLFILMFAFVVFYKKHFFKNQLKG
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]