Click here to switch to the map view.

The map label for this gene is 153951293

Identifier: 153951293

GI number: 153951293

Start: 76032

End: 76886

Strand: Direct

Name: 153951293

Synonym: JJD26997_0067

Alternate gene names: NA

Gene position: 76032-76886 (Clockwise)

Preceding gene: 153951334

Following gene: 153952073

Centisome position: 4.12

GC content: 30.99

Gene sequence:

>855_bases
ATGAAAAAAATTTTCTTAGTATTTATGGTTTTAGTTAATTGTGTTTTTGCTAGCGATGAATTAAATATAGATAGTTTGTT
TAAAAAGCAAATAGGCTTAAGAAGCATTACAAGCGTTTCTTTGCTTAGCACAGGAAATGCAAACTCGTATTCTCTTTATC
CTAATATAACAATAGGCGGAGATCCTACAATTTGGAATGATACAAAGCAAGTGTTTTTAACTCAAACTTTCATTTATACC
CTAACACCTAAGTTTGACATACTTATTTCAGGGGGTGGAAGTTATGCAAGAGCTGAATATACAAACTTTTTTACAAATGA
GTATTCTAGTAAAAACAGAATAGGTTTTGACAATTTATGGCTAGGATTTATTTATACAGGCGATAGCATTGCAGATTTAA
TTCCACAAATTACCTTTCAAACTGCAGTCGTTCAAAGAGAAAAAGCAATCAATCAAACCAAAAACTTTTATCTAAAATCA
CAAAGCTTACAAGCTAGTTTAAGGGGATATAGCGACCCTGTTGTATATAGCATTTATACCGGTTTTGGTTATAATCAATC
AAGAAAATTTAAAACCCTTAAAATAGAGTATGGAAATAGTATTTATGTGGGCGGGGATTTATCTATTATTCTAAGTCCTA
AAATTACTTTAGATTTAGGAGCAGAACAAAGATTTCAAATGAAACAAAAAATCAATGGTTATCAAAATTCTGAAGTGCGT
TCTATTCCAACTTTAAGTTTAGGTTCTACTTATAGCATTAATTCAGATACCGCAGTTTCTGTTAATGCTAGTTTTGGAGG
AAGCTCTGCTTCACCTGATAGCATATTTGGGATAAGCTTATGGAAAAAATTCTAA

Upstream 100 bases:

>100_bases
AGATTTTAAAATACTTTATTTAGAATAATAAGCTTTTCAATATCAAGGATTAAATTTTAAAATTAACTTGAGCTGATTAT
TTGAAATGTAAGGATTGACA

Downstream 100 bases:

>100_bases
AAATTTTATTATTTTTACCCATTCTTGCTTTGAGTGCAAAAGCCGAATGGGTAGTTAAGTCTTATCAAGAAATTAAAAAC
GAAAGAGTAATAAGACAAAC

Product: HmcD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKKIFLVFMVLVNCVFASDELNIDSLFKKQIGLRSITSVSLLSTGNANSYSLYPNITIGGDPTIWNDTKQVFLTQTFIYT
LTPKFDILISGGGSYARAEYTNFFTNEYSSKNRIGFDNLWLGFIYTGDSIADLIPQITFQTAVVQREKAINQTKNFYLKS
QSLQASLRGYSDPVVYSIYTGFGYNQSRKFKTLKIEYGNSIYVGGDLSIILSPKITLDLGAEQRFQMKQKINGYQNSEVR
SIPTLSLGSTYSINSDTAVSVNASFGGSSASPDSIFGISLWKKF

Sequences:

>Translated_284_residues
MKKIFLVFMVLVNCVFASDELNIDSLFKKQIGLRSITSVSLLSTGNANSYSLYPNITIGGDPTIWNDTKQVFLTQTFIYT
LTPKFDILISGGGSYARAEYTNFFTNEYSSKNRIGFDNLWLGFIYTGDSIADLIPQITFQTAVVQREKAINQTKNFYLKS
QSLQASLRGYSDPVVYSIYTGFGYNQSRKFKTLKIEYGNSIYVGGDLSIILSPKITLDLGAEQRFQMKQKINGYQNSEVR
SIPTLSLGSTYSINSDTAVSVNASFGGSSASPDSIFGISLWKKF
>Mature_284_residues
MKKIFLVFMVLVNCVFASDELNIDSLFKKQIGLRSITSVSLLSTGNANSYSLYPNITIGGDPTIWNDTKQVFLTQTFIYT
LTPKFDILISGGGSYARAEYTNFFTNEYSSKNRIGFDNLWLGFIYTGDSIADLIPQITFQTAVVQREKAINQTKNFYLKS
QSLQASLRGYSDPVVYSIYTGFGYNQSRKFKTLKIEYGNSIYVGGDLSIILSPKITLDLGAEQRFQMKQKINGYQNSEVR
SIPTLSLGSTYSINSDTAVSVNASFGGSSASPDSIFGISLWKKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31613; Mature: 31613

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFLVFMVLVNCVFASDELNIDSLFKKQIGLRSITSVSLLSTGNANSYSLYPNITIGG
CCHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCHHCCEEEEEECCCCCCEEEEEEEEECC
DPTIWNDTKQVFLTQTFIYTLTPKFDILISGGGSYARAEYTNFFTNEYSSKNRIGFDNLW
CCCEECCCCEEEEEEEEEEEECCCEEEEEECCCCEEEHHHHHHHHCCCCCCCCCCCCCEE
LGFIYTGDSIADLIPQITFQTAVVQREKAINQTKNFYLKSQSLQASLRGYSDPVVYSIYT
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHCCCCCCEEEEEEE
GFGYNQSRKFKTLKIEYGNSIYVGGDLSIILSPKITLDLGAEQRFQMKQKINGYQNSEVR
CCCCCCCCCEEEEEEEECCEEEECCCEEEEECCEEEEECCCHHHHHHHHHHCCCCCCCCC
SIPTLSLGSTYSINSDTAVSVNASFGGSSASPDSIFGISLWKKF
CCCEEECCCEEEECCCCEEEEEECCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKKIFLVFMVLVNCVFASDELNIDSLFKKQIGLRSITSVSLLSTGNANSYSLYPNITIGG
CCHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCHHCCEEEEEECCCCCCEEEEEEEEECC
DPTIWNDTKQVFLTQTFIYTLTPKFDILISGGGSYARAEYTNFFTNEYSSKNRIGFDNLW
CCCEECCCCEEEEEEEEEEEECCCEEEEEECCCCEEEHHHHHHHHCCCCCCCCCCCCCEE
LGFIYTGDSIADLIPQITFQTAVVQREKAINQTKNFYLKSQSLQASLRGYSDPVVYSIYT
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHCCCCCCEEEEEEE
GFGYNQSRKFKTLKIEYGNSIYVGGDLSIILSPKITLDLGAEQRFQMKQKINGYQNSEVR
CCCCCCCCCEEEEEEEECCEEEECCCEEEEECCEEEEECCCHHHHHHHHHHCCCCCCCCC
SIPTLSLGSTYSINSDTAVSVNASFGGSSASPDSIFGISLWKKF
CCCEEECCCEEEECCCCEEEEEECCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA