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The map label for this gene is pglD [H]

Identifier: 153951161

GI number: 153951161

Start: 541214

End: 541825

Strand: Direct

Name: pglD [H]

Synonym: JJD26997_0598

Alternate gene names: 153951161

Gene position: 541214-541825 (Clockwise)

Preceding gene: 153952000

Following gene: 153952136

Centisome position: 29.33

GC content: 31.86

Gene sequence:

>612_bases
ATGTTACAACGGAGAAATTTAATGGTAAGAACTGATAAAATTTATATTTATGCTGCTAGTGGACATGGGTTTGTTTGTGA
AGATGTGGCTAAAAATATGGGCTATAAAGAATGTATTTTTTTAGATGATTTTAAAGGAATGAAATTTGAAAGCACCTTGC
CAAAATATGATATTTTTATAGCCATAGGAAACAATGAAATTCGAAAAAAGATTTATCAAAAAATTTCAGAAAATGGCTTT
AAAATCGTTAATCTTATCCATAAAAGCGCACTTATAAGTCCTAGTGCAAGTGTGGAAGAAAATGCAGGAATTTTAATCAT
GCCTTATGTGGTAATTAATGCTAGAGCTAAAATAGAAAAGGGCGTGATTTTAAATACTTCAAGTGTGATTGAACATGAAT
GTGTAATAGGGGAATTTTCTCATGTGAGTGTGGGGGCTAAATGTGCGGGAAATGTAAAAATCGGTAAAAATTGTTTTTTG
GGGATTAATTCTTGTGTTTTGCCTAATTTAAGCTTAGCAGATGATAGCATTTTAGGTGGTGGAGCAACTTTGGTTCAAAG
TCAAGATGAAAAAGGTGTTTTTGTGGGAGTACCTGCAAAAAGAAAAATATGA

Upstream 100 bases:

>100_bases
GTGTATTATGTGAAAAATATTTCTTTTTTGTTTGATTTAAAAATCATGTTTTTAACAGCTTTAAAGGTTTTAAAACGAAG
CGGGATAAGCAAAGAAGACC

Downstream 100 bases:

>100_bases
AATGATTGTAAAAAGATTTTTGTTTGATTCTTTGTAAATTTTTTAGGTAAAATAGAGTCAATTTATAAAAATTTTGTTTT
ATACAAAGGATAAATCATGA

Product: general glycosylation pathway protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MLQRRNLMVRTDKIYIYAASGHGFVCEDVAKNMGYKECIFLDDFKGMKFESTLPKYDIFIAIGNNEIRKKIYQKISENGF
KIVNLIHKSALISPSASVEENAGILIMPYVVINARAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFL
GINSCVLPNLSLADDSILGGGATLVQSQDEKGVFVGVPAKRKI

Sequences:

>Translated_203_residues
MLQRRNLMVRTDKIYIYAASGHGFVCEDVAKNMGYKECIFLDDFKGMKFESTLPKYDIFIAIGNNEIRKKIYQKISENGF
KIVNLIHKSALISPSASVEENAGILIMPYVVINARAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFL
GINSCVLPNLSLADDSILGGGATLVQSQDEKGVFVGVPAKRKI
>Mature_203_residues
MLQRRNLMVRTDKIYIYAASGHGFVCEDVAKNMGYKECIFLDDFKGMKFESTLPKYDIFIAIGNNEIRKKIYQKISENGF
KIVNLIHKSALISPSASVEENAGILIMPYVVINARAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFL
GINSCVLPNLSLADDSILGGGATLVQSQDEKGVFVGVPAKRKI

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0110

COG function: function code R; Acetyltransferase (isoleucine patch superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018357
- InterPro:   IPR013817
- InterPro:   IPR020019
- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22173; Mature: 22173

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQRRNLMVRTDKIYIYAASGHGFVCEDVAKNMGYKECIFLDDFKGMKFESTLPKYDIFI
CCCCCCEEEEEEEEEEEEECCCCEEHHHHHHCCCCEEEEEEECCCCCEECCCCCCEEEEE
AIGNNEIRKKIYQKISENGFKIVNLIHKSALISPSASVEENAGILIMPYVVINARAKIEK
EECCHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCEECC
GVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVLPNLSLADDSILGG
CEEEECHHHHHHEEEECCCCEEEECCEECCCEEECCEEEEECCHHHCCCCCCCCCCEECC
GATLVQSQDEKGVFVGVPAKRKI
CEEEEECCCCCCEEEECCCCCCC
>Mature Secondary Structure
MLQRRNLMVRTDKIYIYAASGHGFVCEDVAKNMGYKECIFLDDFKGMKFESTLPKYDIFI
CCCCCCEEEEEEEEEEEEECCCCEEHHHHHHCCCCEEEEEEECCCCCEECCCCCCEEEEE
AIGNNEIRKKIYQKISENGFKIVNLIHKSALISPSASVEENAGILIMPYVVINARAKIEK
EECCHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCEECC
GVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVLPNLSLADDSILGG
CEEEECHHHHHHEEEECCCCEEEECCEECCCEEECCEEEEECCHHHCCCCCCCCCCEECC
GATLVQSQDEKGVFVGVPAKRKI
CEEEEECCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]