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The map label for this gene is pgbA [H]

Identifier: 153951120

GI number: 153951120

Start: 460481

End: 461206

Strand: Direct

Name: pgbA [H]

Synonym: JJD26997_0516

Alternate gene names: 153951120

Gene position: 460481-461206 (Clockwise)

Preceding gene: 153952040

Following gene: 153952228

Centisome position: 24.96

GC content: 31.4

Gene sequence:

>726_bases
TTGTTTAAAACTATAGTGTGTTTTTTAGCTTTAAACCTTAGCCTCTTTGCGGTTGGGTTTGATTTAAAACCTATAAAAAG
CGAACTTGTAAAAGTTGATGATATTTATGGTTATATTAAAGATAGTGATGATATAAAACTTTATTCAAGTGGCGTAGTAG
TGCAGCATTTTAGCAATTCGCAAAGTATCATAGCTAGAGCAAGTGTTATAGATAAAAAAAATGGTTTGGCAAAATTAGAA
TTTAGTGTTTTTTCAGCTCTTAAGCAAGATGCTTTGCCTTTACCAAATGTTTTACCTAAAGTAGGTGATGAGGTTGTTTT
AAATTTTCTTTATGATAGAGGATTGGTAATTGCTCCTGATGAACAAACTTATAATGAACTTGTTAGAGAATTTCCACAGA
TATATTTTACCCATATTGATATTTTTGGAGCGCAATTAATTAGAACAGCCACTCTTTCTCCTAAGCGTTCAGATTTTAGG
CAATTTTGCGATGATAATGCGGTTGGCATTTTGGTTGTAGCTTTGGAAAATCAAGCAGAAGTTGTGGATTGTCAAGATTT
CAATAAGCTTTATGAAGTGCCTATAAGCAAGCCAACTAGCGTTCAGGTTCCTTTTTATTCTCGTATAGGTGGATATAAAA
GTAATTTTTTTGATTTTAACTCTCAAGAAATAGGAAATTATTATAGATATTATGATGCTTTGATTAATCTTCCTAAGGTG
CAATAA

Upstream 100 bases:

>100_bases
AGAATTTTAAAATTTGAAAGCTATATTTTACTTTATTTTTCTTATAATTGCTTAATAAAAAAGGATTATAATTCTATAAA
TTTTTATTTAAGGAGCAAAT

Downstream 100 bases:

>100_bases
ACATGAAAAAAGAATTTGAACAATATTTTAAACGATTTTTAGGAGAAGAAAACGCTTATTTTGATGAAATTCACAAAAGA
GCTTATAGTTACGATGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MFKTIVCFLALNLSLFAVGFDLKPIKSELVKVDDIYGYIKDSDDIKLYSSGVVVQHFSNSQSIIARASVIDKKNGLAKLE
FSVFSALKQDALPLPNVLPKVGDEVVLNFLYDRGLVIAPDEQTYNELVREFPQIYFTHIDIFGAQLIRTATLSPKRSDFR
QFCDDNAVGILVVALENQAEVVDCQDFNKLYEVPISKPTSVQVPFYSRIGGYKSNFFDFNSQEIGNYYRYYDALINLPKV
Q

Sequences:

>Translated_241_residues
MFKTIVCFLALNLSLFAVGFDLKPIKSELVKVDDIYGYIKDSDDIKLYSSGVVVQHFSNSQSIIARASVIDKKNGLAKLE
FSVFSALKQDALPLPNVLPKVGDEVVLNFLYDRGLVIAPDEQTYNELVREFPQIYFTHIDIFGAQLIRTATLSPKRSDFR
QFCDDNAVGILVVALENQAEVVDCQDFNKLYEVPISKPTSVQVPFYSRIGGYKSNFFDFNSQEIGNYYRYYDALINLPKV
Q
>Mature_241_residues
MFKTIVCFLALNLSLFAVGFDLKPIKSELVKVDDIYGYIKDSDDIKLYSSGVVVQHFSNSQSIIARASVIDKKNGLAKLE
FSVFSALKQDALPLPNVLPKVGDEVVLNFLYDRGLVIAPDEQTYNELVREFPQIYFTHIDIFGAQLIRTATLSPKRSDFR
QFCDDNAVGILVVALENQAEVVDCQDFNKLYEVPISKPTSVQVPFYSRIGGYKSNFFDFNSQEIGNYYRYYDALINLPKV
Q

Specific function: Binds plasminogen, specifically, and in a concentration and lysine-dependent manner. Plasminogen is the precursor of plasmin, a serine protease that cleaves fibrin, fibronectin, laminin and vitronectin. Acquisition of plasminogen/plasmin could enable H.py

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell surface (Probable). Note=The plasminogen-binding region is localized on the surface the bacterium (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27300; Mature: 27300

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKTIVCFLALNLSLFAVGFDLKPIKSELVKVDDIYGYIKDSDDIKLYSSGVVVQHFSNS
CHHHHHHHHHHHHHHEEECCCCCHHHHHHEEHHHHHEEECCCCCEEEEECCEEEEECCCC
QSIIARASVIDKKNGLAKLEFSVFSALKQDALPLPNVLPKVGDEVVLNFLYDRGLVIAPD
HHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEECCC
EQTYNELVREFPQIYFTHIDIFGAQLIRTATLSPKRSDFRQFCDDNAVGILVVALENQAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEEECCCCC
VVDCQDFNKLYEVPISKPTSVQVPFYSRIGGYKSNFFDFNSQEIGNYYRYYDALINLPKV
EECHHHHHHHHCCCCCCCCEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
Q
C
>Mature Secondary Structure
MFKTIVCFLALNLSLFAVGFDLKPIKSELVKVDDIYGYIKDSDDIKLYSSGVVVQHFSNS
CHHHHHHHHHHHHHHEEECCCCCHHHHHHEEHHHHHEEECCCCCEEEEECCEEEEECCCC
QSIIARASVIDKKNGLAKLEFSVFSALKQDALPLPNVLPKVGDEVVLNFLYDRGLVIAPD
HHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEECCC
EQTYNELVREFPQIYFTHIDIFGAQLIRTATLSPKRSDFRQFCDDNAVGILVVALENQAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEEECCCCC
VVDCQDFNKLYEVPISKPTSVQVPFYSRIGGYKSNFFDFNSQEIGNYYRYYDALINLPKV
EECHHHHHHHHCCCCCCCCEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]