| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
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The map label for this gene is asd [H]
Identifier: 153951010
GI number: 153951010
Start: 690730
End: 691761
Strand: Direct
Name: asd [H]
Synonym: JJD26997_0765
Alternate gene names: 153951010
Gene position: 690730-691761 (Clockwise)
Preceding gene: 153952060
Following gene: 153951483
Centisome position: 37.44
GC content: 31.88
Gene sequence:
>1032_bases ATGTCAAAAAAACAAAAAATAGCCATTGTGGGTGCCACTGGTGCGGTTGGGGAAGAGCTTTTAAATGTTTTAGATGAACT TGATTTTCCAGTGGAAAGTATTTTACCTTTAGCAAGTGCAAAAAGTGTAGGTAGTGAAGTAGAATTTAAAGGCAAAGCTT ATAAAGTCAAAGAACTTACTGAAAATGTATTTAAAGAAAATCCTATTGATATTGCTTTTTTTAGTGCAGGTGGAAGTGTG AGTGAAAAATATGCTAAATTTGCAGTAGAATCGGGTGCTGTTGTTATTGATAATACAAGTCATTTTAGAATGGAAAAAGA TGTTCCTTTGGTGGTTCCTGAATGCAATCCTGAGGATATTAAAGATTGGAAAAAAACAGGGATTATTGCTAATCCAAATT GTTCTACCATACAAATGGTGCAAGTTTTAAAACCTTTAAATGATGTATTTAATTTAAAGCGTGTTGATGTAAGCACCTAT CAGGCTGCAAGTGGAGCAGGAAAAGAAGGAATGCAAGAATTGGTTAAAGCCATGCAAAGTTTTTTTGCTTTTAAACTTGA TGAGTTTGAACCTCAAACTTTTCCTTATACTTTGGCGCTTAATCTTATTCCACAAATTGATGTTTTTATGGATAATGATT ACACTAAAGAAGAACTTAAAATGGTTAATGAAACTCAAAAAATTTTACATAAAAATTTAGAAGTTTCAGCAACTTGTGTA AGAGTGCCTGTTTTAAGAAGTCATAGTGAAGCTATTACTATGCATTTTGAAAAAGAAATAAATGTAAAAAAAGCTAAAGA AATTTTAGAAAAAGCACCAAATGTTGTTGTCATAGATGATCCTAAAAATAAAAAATACCCTATGCCTTTAATGACTAGCG ATACTAATGAAACTTATGTAGGAAGAATTCGTGCTGATGTGTATGATAAAAAAATACTCCATCTTTGGTGTGTGGCAGAT CAAATTCGCGTAGGTGCTGCAACAAATGCTGTGCGTATTGCGCAAAAATGGTTAGAATTAAAAAATAAATAA
Upstream 100 bases:
>100_bases TAAGTGTAGATTATGACAAGGATCAAGCTTCTCAAATTTTAGGTATGGATATAAAAATTTTAAATGAAAAAATTAAAAAA TATCAAATAAAGGATAAGTA
Downstream 100 bases:
>100_bases GGAAAAAAATGTTAGAGAAAATATTTGAATCTTTGCTTGTTAGAAGTCGTATTGTTACAATTTTACCCGTAATTTTTGGT TTAATTGGAGCTTTTGTATT
Product: aspartate-semialdehyde dehydrogenase
Products: NA
Alternate protein names: ASA dehydrogenase; ASADH [H]
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MSKKQKIAIVGATGAVGEELLNVLDELDFPVESILPLASAKSVGSEVEFKGKAYKVKELTENVFKENPIDIAFFSAGGSV SEKYAKFAVESGAVVIDNTSHFRMEKDVPLVVPECNPEDIKDWKKTGIIANPNCSTIQMVQVLKPLNDVFNLKRVDVSTY QAASGAGKEGMQELVKAMQSFFAFKLDEFEPQTFPYTLALNLIPQIDVFMDNDYTKEELKMVNETQKILHKNLEVSATCV RVPVLRSHSEAITMHFEKEINVKKAKEILEKAPNVVVIDDPKNKKYPMPLMTSDTNETYVGRIRADVYDKKILHLWCVAD QIRVGAATNAVRIAQKWLELKNK
Sequences:
>Translated_343_residues MSKKQKIAIVGATGAVGEELLNVLDELDFPVESILPLASAKSVGSEVEFKGKAYKVKELTENVFKENPIDIAFFSAGGSV SEKYAKFAVESGAVVIDNTSHFRMEKDVPLVVPECNPEDIKDWKKTGIIANPNCSTIQMVQVLKPLNDVFNLKRVDVSTY QAASGAGKEGMQELVKAMQSFFAFKLDEFEPQTFPYTLALNLIPQIDVFMDNDYTKEELKMVNETQKILHKNLEVSATCV RVPVLRSHSEAITMHFEKEINVKKAKEILEKAPNVVVIDDPKNKKYPMPLMTSDTNETYVGRIRADVYDKKILHLWCVAD QIRVGAATNAVRIAQKWLELKNK >Mature_342_residues SKKQKIAIVGATGAVGEELLNVLDELDFPVESILPLASAKSVGSEVEFKGKAYKVKELTENVFKENPIDIAFFSAGGSVS EKYAKFAVESGAVVIDNTSHFRMEKDVPLVVPECNPEDIKDWKKTGIIANPNCSTIQMVQVLKPLNDVFNLKRVDVSTYQ AASGAGKEGMQELVKAMQSFFAFKLDEFEPQTFPYTLALNLIPQIDVFMDNDYTKEELKMVNETQKILHKNLEVSATCVR VPVLRSHSEAITMHFEKEINVKKAKEILEKAPNVVVIDDPKNKKYPMPLMTSDTNETYVGRIRADVYDKKILHLWCVADQ IRVGAATNAVRIAQKWLELKNK
Specific function: Unknown
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788658, Length=343, Percent_Identity=33.5276967930029, Blast_Score=182, Evalue=4e-47, Organism=Escherichia coli, GI1789841, Length=371, Percent_Identity=29.1105121293801, Blast_Score=114, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6320362, Length=405, Percent_Identity=27.4074074074074, Blast_Score=89, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000319 - InterPro: IPR012080 - InterPro: IPR005986 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.11 [H]
Molecular weight: Translated: 38416; Mature: 38285
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS01103 ASD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKQKIAIVGATGAVGEELLNVLDELDFPVESILPLASAKSVGSEVEFKGKAYKVKELT CCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCEEEHHHHH ENVFKENPIDIAFFSAGGSVSEKYAKFAVESGAVVIDNTSHFRMEKDVPLVVPECNPEDI HHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCEEECCCCCEEECCCCHHHH KDWKKTGIIANPNCSTIQMVQVLKPLNDVFNLKRVDVSTYQAASGAGKEGMQELVKAMQS HHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCEEECCHHHHCCCCCCHHHHHHHHHHHHH FFAFKLDEFEPQTFPYTLALNLIPQIDVFMDNDYTKEELKMVNETQKILHKNLEVSATCV HHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEE RVPVLRSHSEAITMHFEKEINVKKAKEILEKAPNVVVIDDPKNKKYPMPLMTSDTNETYV EEHHHHCCCCEEEEEEHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEECCCCCCEE GRIRADVYDKKILHLWCVADQIRVGAATNAVRIAQKWLELKNK EEEEHHHHHHHHEEEEEEHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SKKQKIAIVGATGAVGEELLNVLDELDFPVESILPLASAKSVGSEVEFKGKAYKVKELT CCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCEEEHHHHH ENVFKENPIDIAFFSAGGSVSEKYAKFAVESGAVVIDNTSHFRMEKDVPLVVPECNPEDI HHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCEEECCCCCEEECCCCHHHH KDWKKTGIIANPNCSTIQMVQVLKPLNDVFNLKRVDVSTYQAASGAGKEGMQELVKAMQS HHHHHCCCEECCCCCHHHHHHHHHHHHHHHCCEEECCHHHHCCCCCCHHHHHHHHHHHHH FFAFKLDEFEPQTFPYTLALNLIPQIDVFMDNDYTKEELKMVNETQKILHKNLEVSATCV HHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEE RVPVLRSHSEAITMHFEKEINVKKAKEILEKAPNVVVIDDPKNKKYPMPLMTSDTNETYV EEHHHHCCCCEEEEEEHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEECCCCCCEE GRIRADVYDKKILHLWCVADQIRVGAATNAVRIAQKWLELKNK EEEEHHHHHHHHEEEEEEHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9127485; 10688204 [H]