Definition Yersinia pseudotuberculosis IP 31758 plasmid_59kb, complete sequence.
Accession NC_009704
Length 58,679

Click here to switch to the map view.

The map label for this gene is 153930623

Identifier: 153930623

GI number: 153930623

Start: 33378

End: 33923

Strand: Direct

Name: 153930623

Synonym: YpsIP31758_A0012

Alternate gene names: NA

Gene position: 33378-33923 (Clockwise)

Preceding gene: 153930567

Following gene: 153930586

Centisome position: 56.88

GC content: 34.8

Gene sequence:

>546_bases
ATGTTTATATGTGATGAGAAAAAAAACCTCAGTGTCTCTAACACCAAGTACATTAACTTAGCCTTTAAAGAAACAGAGTT
TGTGGCTGATAATGATTATATGAAAAATCAGGCAGAGTTATTGGCGAGTCGCTTTACTGATGAAACATCCAGAACAGATA
TTATAATGTATGTAATTGATGTGATTGAATGTGCGGAAAAAAATAATTTCGACGTGACGGATATGCTCCGTGTTTTCCAC
TTTCTTGCTGACAGGTTCGGGTTTGGTTATCAAGTAAATACGTTTGGTACAGAGCAACAAGTTACTGCATATAAGTATGC
CTCCAGTTGTTACAATGAGATTGTCGTTGTCCCAATATCGAGAATCAAATATGTAAAACAACACGATAGAGTTATTAAGA
AAAACGGCCTGTCACTTTGTCGAGTATCCATTGTCACTACTGATAATGAAGAATTTAAATTGCATATCGACGATCAAATT
ATATCCAGCTTGAAATGTGACGTTATTTTAAAATGTGCCGTAAAATTTATCGACCAGGCTTTATAA

Upstream 100 bases:

>100_bases
CTAATATTTGAGAGTGAACGGTGGATTAATTTGGTAAGATTATAAACTGATAAAATTTATTTTTTAGATATTACGCAACA
AAAACATCAATGGAGTAGTC

Downstream 100 bases:

>100_bases
TTCCGCAATACGAATGCCGCATTTGGATAAAAAAAGTGTACAGCCGGTATTCACCGGCTGGCATTCGCTAGCCGCCTTTC
CCTGCTCTGCTCTTTCCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MFICDEKKNLSVSNTKYINLAFKETEFVADNDYMKNQAELLASRFTDETSRTDIIMYVIDVIECAEKNNFDVTDMLRVFH
FLADRFGFGYQVNTFGTEQQVTAYKYASSCYNEIVVVPISRIKYVKQHDRVIKKNGLSLCRVSIVTTDNEEFKLHIDDQI
ISSLKCDVILKCAVKFIDQAL

Sequences:

>Translated_181_residues
MFICDEKKNLSVSNTKYINLAFKETEFVADNDYMKNQAELLASRFTDETSRTDIIMYVIDVIECAEKNNFDVTDMLRVFH
FLADRFGFGYQVNTFGTEQQVTAYKYASSCYNEIVVVPISRIKYVKQHDRVIKKNGLSLCRVSIVTTDNEEFKLHIDDQI
ISSLKCDVILKCAVKFIDQAL
>Mature_181_residues
MFICDEKKNLSVSNTKYINLAFKETEFVADNDYMKNQAELLASRFTDETSRTDIIMYVIDVIECAEKNNFDVTDMLRVFH
FLADRFGFGYQVNTFGTEQQVTAYKYASSCYNEIVVVPISRIKYVKQHDRVIKKNGLSLCRVSIVTTDNEEFKLHIDDQI
ISSLKCDVILKCAVKFIDQAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20919; Mature: 20919

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFICDEKKNLSVSNTKYINLAFKETEFVADNDYMKNQAELLASRFTDETSRTDIIMYVID
CEECCCCCCCCCCCCEEEEEEEECCEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
VIECAEKNNFDVTDMLRVFHFLADRFGFGYQVNTFGTEQQVTAYKYASSCYNEIVVVPIS
HHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEHH
RIKYVKQHDRVIKKNGLSLCRVSIVTTDNEEFKLHIDDQIISSLKCDVILKCAVKFIDQA
HHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHC
L
C
>Mature Secondary Structure
MFICDEKKNLSVSNTKYINLAFKETEFVADNDYMKNQAELLASRFTDETSRTDIIMYVID
CEECCCCCCCCCCCCEEEEEEEECCEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
VIECAEKNNFDVTDMLRVFHFLADRFGFGYQVNTFGTEQQVTAYKYASSCYNEIVVVPIS
HHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEHH
RIKYVKQHDRVIKKNGLSLCRVSIVTTDNEEFKLHIDDQIISSLKCDVILKCAVKFIDQA
HHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA