| Definition | Yersinia pseudotuberculosis IP 31758 plasmid_59kb, complete sequence. |
|---|---|
| Accession | NC_009704 |
| Length | 58,679 |
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The map label for this gene is incC [H]
Identifier: 153930613
GI number: 153930613
Start: 56571
End: 57656
Strand: Reverse
Name: incC [H]
Synonym: YpsIP31758_A0038
Alternate gene names: 153930613
Gene position: 57656-56571 (Counterclockwise)
Preceding gene: 153930624
Following gene: 153930577
Centisome position: 98.26
GC content: 42.63
Gene sequence:
>1086_bases ATGGGTAATGTCCATGAAAAAACGGCTCTCGAAAGCCGAGTTCCAGGCAGCCATAAAAGACTTGGATGTGGGCCAACAAA CCATCGATATAGCAAATGGTGTCTTGGTCGAGGGGACGCCGCAAGCAACGTTTGTAGCGATGTTAGGGCTTTCCCGAGGG GCTGTATCTCAAGCAGTGAATCGTGTCTGGATAGCACATCAGGAGAAAAATCTGCCGGAGGGATACGAGAGGGTTACAGC GATACTTCCGGAACCAAAAGCATTCATAGTCAAGAAATGGGCCGAGGAAACAGCAAAAAAACTGGATGGCAAAAAATGAA AACATTGGTTGTTGCTCAACAAAAAGGCGGGGTTGGTAAAACTTCAACATTAGTTCATATCGCTTATGACTTTTTTGAAC GTGGTTTAAAAGTTGCTGTAATCGATTTAGATACTCAGGGTAACGCAAGTTTCACACTTAAAGAGTATGAAAGCGGATAC TTAGCAAGTCAGATGTTTGAGGAATCAACTAAAGACTTTCACTCAGTATTTAGCCAATTACCTGATGGGCCATTATTAAG TTTGATAAAGTCAGACCCTGTTCTTGCCAATATGGAGAGTAAGCCGGTTGCTGATGTTGTTGCTAATTTCAAAGCTAAAA TAGCTGCACTGTCTGATTGCGGTTTTGATGTTGTTCTTATCGATACTGCTCCTTCCCTTGGTGTCAGCCTTGCAACCGCT TTGTATGCCTCTGATTATGTTGTGTCCCCTATTGAGTTAGAGGCTTACAGTATTCAAGGTATAGGGAAAATGGTTACTAC GATCATCAACGTGCGACAATTTAACCCATCATTAAACTTTCTAGGAATGGTGCCAAGTAAAGTTGATGGACGTAACCCAC GTCACGGCCAACATTTAGCTGAACTGAAAGAAGCCTATCCTCAATTGATGATCCCCGCAGCTATCGGTCTACGCAGTAGC ATTGCTGATGCTCTAGCAACAGGTGTCCCTGTTTGGAAAATCAAAAAAACGGCTGCTAGAAAAGCAGCAAAAGAAGTTCG TGAGTTAGCTAAATATATTTTTGAAAAGATGGAGATTGCAGAATGA
Upstream 100 bases:
>100_bases TTAGCGGCTAAAATGATTGAATTAGGCACTTAGTTTAGCTAAACTTACTGCATCGTTAGCGGCTGTCACCGCTATTTTAA TTTCAGGCGCGGAGAAATAT
Downstream 100 bases:
>100_bases CCTCAAAAGAAAAAAAATCATCGCTAGGACTGGATGCAATTGGTGATCTGTCTAGCCTATTAGCAGGTAAAGGGCCATCA CCAACAAGCCCTATTGACCT
Product: plasmid partition protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MGNVHEKTALESRVPGSHKRLGCGPTNHRYSKWCLGRGDAASNVCSDVRAFPRGCISSSESCLDSTSGEKSAGGIREGYS DTSGTKSIHSQEMGRGNSKKTGWQKMKTLVVAQQKGGVGKTSTLVHIAYDFFERGLKVAVIDLDTQGNASFTLKEYESGY LASQMFEESTKDFHSVFSQLPDGPLLSLIKSDPVLANMESKPVADVVANFKAKIAALSDCGFDVVLIDTAPSLGVSLATA LYASDYVVSPIELEAYSIQGIGKMVTTIINVRQFNPSLNFLGMVPSKVDGRNPRHGQHLAELKEAYPQLMIPAAIGLRSS IADALATGVPVWKIKKTAARKAAKEVRELAKYIFEKMEIAE
Sequences:
>Translated_361_residues MGNVHEKTALESRVPGSHKRLGCGPTNHRYSKWCLGRGDAASNVCSDVRAFPRGCISSSESCLDSTSGEKSAGGIREGYS DTSGTKSIHSQEMGRGNSKKTGWQKMKTLVVAQQKGGVGKTSTLVHIAYDFFERGLKVAVIDLDTQGNASFTLKEYESGY LASQMFEESTKDFHSVFSQLPDGPLLSLIKSDPVLANMESKPVADVVANFKAKIAALSDCGFDVVLIDTAPSLGVSLATA LYASDYVVSPIELEAYSIQGIGKMVTTIINVRQFNPSLNFLGMVPSKVDGRNPRHGQHLAELKEAYPQLMIPAAIGLRSS IADALATGVPVWKIKKTAARKAAKEVRELAKYIFEKMEIAE >Mature_360_residues GNVHEKTALESRVPGSHKRLGCGPTNHRYSKWCLGRGDAASNVCSDVRAFPRGCISSSESCLDSTSGEKSAGGIREGYSD TSGTKSIHSQEMGRGNSKKTGWQKMKTLVVAQQKGGVGKTSTLVHIAYDFFERGLKVAVIDLDTQGNASFTLKEYESGYL ASQMFEESTKDFHSVFSQLPDGPLLSLIKSDPVLANMESKPVADVVANFKAKIAALSDCGFDVVLIDTAPSLGVSLATAL YASDYVVSPIELEAYSIQGIGKMVTTIINVRQFNPSLNFLGMVPSKVDGRNPRHGQHLAELKEAYPQLMIPAAIGLRSSI ADALATGVPVWKIKKTAARKAAKEVRELAKYIFEKMEIAE
Specific function: This is one of the proteins encoded by the trfB operon; it is involved in plasmid maintenance and replication [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 38928; Mature: 38797
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNVHEKTALESRVPGSHKRLGCGPTNHRYSKWCLGRGDAASNVCSDVRAFPRGCISSSE CCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCH SCLDSTSGEKSAGGIREGYSDTSGTKSIHSQEMGRGNSKKTGWQKMKTLVVAQQKGGVGK HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC TSTLVHIAYDFFERGLKVAVIDLDTQGNASFTLKEYESGYLASQMFEESTKDFHSVFSQL HHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHC PDGPLLSLIKSDPVLANMESKPVADVVANFKAKIAALSDCGFDVVLIDTAPSLGVSLATA CCCHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH LYASDYVVSPIELEAYSIQGIGKMVTTIINVRQFNPSLNFLGMVPSKVDGRNPRHGQHLA HHHCCCEECCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHH ELKEAYPQLMIPAAIGLRSSIADALATGVPVWKIKKTAARKAAKEVRELAKYIFEKMEIA HHHHHHHHEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC E C >Mature Secondary Structure GNVHEKTALESRVPGSHKRLGCGPTNHRYSKWCLGRGDAASNVCSDVRAFPRGCISSSE CCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCH SCLDSTSGEKSAGGIREGYSDTSGTKSIHSQEMGRGNSKKTGWQKMKTLVVAQQKGGVGK HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC TSTLVHIAYDFFERGLKVAVIDLDTQGNASFTLKEYESGYLASQMFEESTKDFHSVFSQL HHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHC PDGPLLSLIKSDPVLANMESKPVADVVANFKAKIAALSDCGFDVVLIDTAPSLGVSLATA CCCHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH LYASDYVVSPIELEAYSIQGIGKMVTTIINVRQFNPSLNFLGMVPSKVDGRNPRHGQHLA HHHCCCEECCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHH ELKEAYPQLMIPAAIGLRSSIADALATGVPVWKIKKTAARKAAKEVRELAKYIFEKMEIA HHHHHHHHEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3520485; 3309894; 3430606 [H]