| Definition | Yersinia pseudotuberculosis IP 31758 plasmid_59kb, complete sequence. |
|---|---|
| Accession | NC_009704 |
| Length | 58,679 |
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The map label for this gene is pilP2
Identifier: 153930597
GI number: 153930597
Start: 21471
End: 21914
Strand: Direct
Name: pilP2
Synonym: YpsIP31758_A0062
Alternate gene names: NA
Gene position: 21471-21914 (Clockwise)
Preceding gene: 153930575
Following gene: 153930625
Centisome position: 36.59
GC content: 38.29
Gene sequence:
>444_bases ATGGTAAAAAGTAAGCTAATAAAGAATAGAGTTTATTTTCTATTGCTATCTATAATCATCTCTTGTTCTGTCAGTGCAAA TGAAATAAGTGAAGTTAAATCAGTTTGGGATTTAGATGTATTGCAAAGCCAAACTACTTACCTTAAAGCCTTAGCTGCGT TTCAGGAAGCTAAAGATAAAAGCGGTGGAACAATGCCGATTGTCGGGAGTGTTGCACCAGGGGTTAACTCCGCACAAAAA ATACTCTTACCACAAGTTATTAAAATTGTGGGTAATGGCAGTGGTCTATCGGTGAGATTGGTTTTATCTAATGGTACAGA AATGACCAAGAAGAAAGGCGACTCTATACCAGGGGGATACAAACTAACAAAAGTAACTCTTGATGAAGTGAGTATTTCTG ATGCTGCGGGGACGTCCTTTATTCTTAGTGAGGTTGGCTCATGA
Upstream 100 bases:
>100_bases AAACAGAACAATTTAAGCGGTATGAGAGTTACAAACATCATATACGTCATTAACAATGATACATCTGAAATTTTATATAA GGTAAAAGGGGTTATTTATT
Downstream 100 bases:
>100_bases AAGTTTTAAATTTATCCGGTATTGATGGTGTTGCTGATTATCATTTGCCAGCAAAATTAAAAGATGCAATGTGTCTGGTC AAAACAGATTTAGGCAATAT
Product: type IV pilus biogenesis/secretion protein PilP
Products: NA
Alternate protein names: Type IV Pilus Biogenesis/Secretion Protein PilP
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MVKSKLIKNRVYFLLLSIIISCSVSANEISEVKSVWDLDVLQSQTTYLKALAAFQEAKDKSGGTMPIVGSVAPGVNSAQK ILLPQVIKIVGNGSGLSVRLVLSNGTEMTKKKGDSIPGGYKLTKVTLDEVSISDAAGTSFILSEVGS
Sequences:
>Translated_147_residues MVKSKLIKNRVYFLLLSIIISCSVSANEISEVKSVWDLDVLQSQTTYLKALAAFQEAKDKSGGTMPIVGSVAPGVNSAQK ILLPQVIKIVGNGSGLSVRLVLSNGTEMTKKKGDSIPGGYKLTKVTLDEVSISDAAGTSFILSEVGS >Mature_147_residues MVKSKLIKNRVYFLLLSIIISCSVSANEISEVKSVWDLDVLQSQTTYLKALAAFQEAKDKSGGTMPIVGSVAPGVNSAQK ILLPQVIKIVGNGSGLSVRLVLSNGTEMTKKKGDSIPGGYKLTKVTLDEVSISDAAGTSFILSEVGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15490; Mature: 15490
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKSKLIKNRVYFLLLSIIISCSVSANEISEVKSVWDLDVLQSQTTYLKALAAFQEAKDK CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SGGTMPIVGSVAPGVNSAQKILLPQVIKIVGNGSGLSVRLVLSNGTEMTKKKGDSIPGGY CCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHCCCCCCCCE KLTKVTLDEVSISDAAGTSFILSEVGS EEEEEEECCEECCCCCCHHHHHHHCCC >Mature Secondary Structure MVKSKLIKNRVYFLLLSIIISCSVSANEISEVKSVWDLDVLQSQTTYLKALAAFQEAKDK CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SGGTMPIVGSVAPGVNSAQKILLPQVIKIVGNGSGLSVRLVLSNGTEMTKKKGDSIPGGY CCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHCCCCCCCCE KLTKVTLDEVSISDAAGTSFILSEVGS EEEEEEECCEECCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA