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The map label for this gene is traD [H]

Identifier: 153930582

GI number: 153930582

Start: 42628

End: 42861

Strand: Reverse

Name: traD [H]

Synonym: YpsIP31758_A0022

Alternate gene names: 153930582

Gene position: 42861-42628 (Counterclockwise)

Preceding gene: 153930584

Following gene: 153930580

Centisome position: 73.04

GC content: 38.46

Gene sequence:

>234_bases
ATGAACCAAAAAACAAACTATCCAGATGTTGCGGTTTTTAATAATGAAAAGGATTCATCCTCTGTATTAAATGAAAAGTT
AAATGATGCTTATACGCCAGGATTTCAAGCTGATTTTGACCCTGAAGAGGCGGTTGAAGTTGGTGCATTTGTAGAAGATG
CACTGAGTGAGGGTGATGCTACTGAAAGTGTTGTTGACCTAATTGACTCAGATAAGGGGAACAAACATGGCTGA

Upstream 100 bases:

>100_bases
AAGGGTTGTGGTGGTCATGCAGTGGTTATCCCGAATGTAATCAGTCCTACCCTGATGCAAAAGGAAAGCCTAACTATACC
AAAGGTAAGGAGTAATCGTT

Downstream 100 bases:

>100_bases
TACTTTGAAGAAACCGTTTCATGAGCAAGTTGCAGAAAAGCTTATCGAGCAATTGAAGCAAGGCACGGCTCCCTGGCAAC
GTCCTTGGAAAGCAGGTTCC

Product: putative conjugal transfer protein TraD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MNQKTNYPDVAVFNNEKDSSSVLNEKLNDAYTPGFQADFDPEEAVEVGAFVEDALSEGDATESVVDLIDSDKGNKHG

Sequences:

>Translated_77_residues
MNQKTNYPDVAVFNNEKDSSSVLNEKLNDAYTPGFQADFDPEEAVEVGAFVEDALSEGDATESVVDLIDSDKGNKHG
>Mature_77_residues
MNQKTNYPDVAVFNNEKDSSSVLNEKLNDAYTPGFQADFDPEEAVEVGAFVEDALSEGDATESVVDLIDSDKGNKHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To plasmid R751 traD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016703 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8340; Mature: 8340

Theoretical pI: Translated: 3.73; Mature: 3.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQKTNYPDVAVFNNEKDSSSVLNEKLNDAYTPGFQADFDPEEAVEVGAFVEDALSEGDA
CCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
TESVVDLIDSDKGNKHG
HHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNQKTNYPDVAVFNNEKDSSSVLNEKLNDAYTPGFQADFDPEEAVEVGAFVEDALSEGDA
CCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
TESVVDLIDSDKGNKHG
HHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1818755 [H]