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The map label for this gene is korB [H]

Identifier: 153930577

GI number: 153930577

Start: 55522

End: 56574

Strand: Reverse

Name: korB [H]

Synonym: YpsIP31758_A0037

Alternate gene names: 153930577

Gene position: 56574-55522 (Counterclockwise)

Preceding gene: 153930613

Following gene: 153930619

Centisome position: 96.41

GC content: 38.94

Gene sequence:

>1053_bases
ATGACCTCAAAAGAAAAAAAATCATCGCTAGGACTGGATGCAATTGGTGATCTGTCTAGCCTATTAGCAGGTAAAGGGCC
ATCACCAACAAGCCCTATTGACCTTGATATGAACCTAATCGACGAAGATCCAAATCAACCTCGAACAGAAGAAAACCCAG
GCTTTTCTATCCAGAGCTTAAATGAGCTTGCTGAAACTATCCGCCAGCGCGGTGTTAAAACACCTATTTCAGTACGTGAC
AATCCAGATAGTCCAGGGCGTTATTTGATAAATCATGGTGCTAGGCGTATGCGCGCATCAAAAATAGCACAGAAAAAAAC
GATTCCAGGGTTTATAGACAACGATTATAACGAAATTGATCAGGTTATTGAAAACCTGCAACGCAATGAATTAACAGCCC
GTGAAATTGCCGATTTTATAGGTCGCGAGTTGGCTAAGGGGAAGAAGAAAGGCGTGATTGCTAAAGAACTTGGTGTATCA
GCTGCTTTTGTTTCTCAGCACGTAACTCTGCTAGATTTACCTGATGCAATAGCTAAAGCTTTTAATTCTGGCCGCATAAA
AGATGTGACCGTTATAAATGAGCTGGTGACTGCATTTAAAAAGAACGCTAAAGCTGTTACAAGTTGGCTTGAGGATGAGG
ATCAAGAAATTAGTCGTGGTTCGGTAAAGTTGCTGCGAGAATTCATTGATAATAAAAATGATGATTCTAATAGCAATATT
TCTTCTGACACTGATTTAGTCTCTGAAGATGAAAGAGATATTTATAACAGCCCTGAATTCGATGGTAGTTCTGAAGATAA
TAATGGGGAAGATAATACTGATAATGGTGGTGATGATTCAGATGAGTCTAATTCAAAAAAATCAAAATCTGAAGATAAGT
CAAAATTGAAAAAGTCTTTTGTAGAAGTTATCGTTGATGAACGAGCAGCCAGAATAATGCTTGATCGTAGACCTTCTCTA
AAAGGACTTGCTTGGTTCAAGTGTGAAGATAACGGTGAGGAGTTTGAAGCTGAATTAAGTAGTGTCACTCTGGTAGCAAT
TATTGAGGGCTAA

Upstream 100 bases:

>100_bases
GTGTCCCTGTTTGGAAAATCAAAAAAACGGCTGCTAGAAAAGCAGCAAAAGAAGTTCGTGAGTTAGCTAAATATATTTTT
GAAAAGATGGAGATTGCAGA

Downstream 100 bases:

>100_bases
CTATTTTTCCTAGCCTAAACAAAGAACTCCCTTTTGGGAGTTCTTTGTTATGTAGGAGATTATAATTTTATGCCAGTATT
TGGGGTTTGGGGAGTAACGG

Product: transcription repressor protein KorB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MTSKEKKSSLGLDAIGDLSSLLAGKGPSPTSPIDLDMNLIDEDPNQPRTEENPGFSIQSLNELAETIRQRGVKTPISVRD
NPDSPGRYLINHGARRMRASKIAQKKTIPGFIDNDYNEIDQVIENLQRNELTAREIADFIGRELAKGKKKGVIAKELGVS
AAFVSQHVTLLDLPDAIAKAFNSGRIKDVTVINELVTAFKKNAKAVTSWLEDEDQEISRGSVKLLREFIDNKNDDSNSNI
SSDTDLVSEDERDIYNSPEFDGSSEDNNGEDNTDNGGDDSDESNSKKSKSEDKSKLKKSFVEVIVDERAARIMLDRRPSL
KGLAWFKCEDNGEEFEAELSSVTLVAIIEG

Sequences:

>Translated_350_residues
MTSKEKKSSLGLDAIGDLSSLLAGKGPSPTSPIDLDMNLIDEDPNQPRTEENPGFSIQSLNELAETIRQRGVKTPISVRD
NPDSPGRYLINHGARRMRASKIAQKKTIPGFIDNDYNEIDQVIENLQRNELTAREIADFIGRELAKGKKKGVIAKELGVS
AAFVSQHVTLLDLPDAIAKAFNSGRIKDVTVINELVTAFKKNAKAVTSWLEDEDQEISRGSVKLLREFIDNKNDDSNSNI
SSDTDLVSEDERDIYNSPEFDGSSEDNNGEDNTDNGGDDSDESNSKKSKSEDKSKLKKSFVEVIVDERAARIMLDRRPSL
KGLAWFKCEDNGEEFEAELSSVTLVAIIEG
>Mature_349_residues
TSKEKKSSLGLDAIGDLSSLLAGKGPSPTSPIDLDMNLIDEDPNQPRTEENPGFSIQSLNELAETIRQRGVKTPISVRDN
PDSPGRYLINHGARRMRASKIAQKKTIPGFIDNDYNEIDQVIENLQRNELTAREIADFIGRELAKGKKKGVIAKELGVSA
AFVSQHVTLLDLPDAIAKAFNSGRIKDVTVINELVTAFKKNAKAVTSWLEDEDQEISRGSVKLLREFIDNKNDDSNSNIS
SDTDLVSEDERDIYNSPEFDGSSEDNNGEDNTDNGGDDSDESNSKKSKSEDKSKLKKSFVEVIVDERAARIMLDRRPSLK
GLAWFKCEDNGEEFEAELSSVTLVAIIEG

Specific function: In conjunction with korA, inhibits the transcription of the kilA, trfA and korAB operons. Is also involved in the negative control of the kilB operon [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010575
- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR008988
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF06613 KorB_C; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 38607; Mature: 38476

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKEKKSSLGLDAIGDLSSLLAGKGPSPTSPIDLDMNLIDEDPNQPRTEENPGFSIQSL
CCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHH
NELAETIRQRGVKTPISVRDNPDSPGRYLINHGARRMRASKIAQKKTIPGFIDNDYNEID
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
QVIENLQRNELTAREIADFIGRELAKGKKKGVIAKELGVSAAFVSQHVTLLDLPDAIAKA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHCCCEEECCHHHHHH
FNSGRIKDVTVINELVTAFKKNAKAVTSWLEDEDQEISRGSVKLLREFIDNKNDDSNSNI
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SSDTDLVSEDERDIYNSPEFDGSSEDNNGEDNTDNGGDDSDESNSKKSKSEDKSKLKKSF
CCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VEVIVDERAARIMLDRRPSLKGLAWFKCEDNGEEFEAELSSVTLVAIIEG
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCEEEEEEECC
>Mature Secondary Structure 
TSKEKKSSLGLDAIGDLSSLLAGKGPSPTSPIDLDMNLIDEDPNQPRTEENPGFSIQSL
CCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHH
NELAETIRQRGVKTPISVRDNPDSPGRYLINHGARRMRASKIAQKKTIPGFIDNDYNEID
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
QVIENLQRNELTAREIADFIGRELAKGKKKGVIAKELGVSAAFVSQHVTLLDLPDAIAKA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHCCCEEECCHHHHHH
FNSGRIKDVTVINELVTAFKKNAKAVTSWLEDEDQEISRGSVKLLREFIDNKNDDSNSNI
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SSDTDLVSEDERDIYNSPEFDGSSEDNNGEDNTDNGGDDSDESNSKKSKSEDKSKLKKSF
CCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VEVIVDERAARIMLDRRPSLKGLAWFKCEDNGEEFEAELSSVTLVAIIEG
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3309894; 3430606; 3520485 [H]