| Definition | Yersinia pseudotuberculosis IP 31758 plasmid_59kb, complete sequence. |
|---|---|
| Accession | NC_009704 |
| Length | 58,679 |
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The map label for this gene is 153930567
Identifier: 153930567
GI number: 153930567
Start: 30797
End: 31144
Strand: Direct
Name: 153930567
Synonym: YpsIP31758_A0009
Alternate gene names: NA
Gene position: 30797-31144 (Clockwise)
Preceding gene: 153930605
Following gene: 153930623
Centisome position: 52.48
GC content: 36.49
Gene sequence:
>348_bases ATGCAACAGAATAATATTTTTGTTGGGAATTTAGCTGCACCATTGGAAATGAAAGGTGAAAATGACAAGCTAATCTGTAA ATTCACACTGATTGCTAATGAATATATAGGAAAAGACCTAAGTACAAATGAGAGTAAGTATAGGGAGGTTTCAATTCGCT TCACAGGGTTTGGAAAGGTAGCAACGCGCTTAGAAAAAGCTCTTTTGGTTGGTGATCAAGTAATAGCTAGTTTTTCAATC AGTAATAACAATTACGAACGGGAAGGGAAAATGGTATATGGCCATAATTTTATTGTGCAAGACTTCCAACTTGGAGCACC AGGTAAAGCACGTAAGGAAAGAACTTAG
Upstream 100 bases:
>100_bases TCTTAAATATCAATATTTAACTCTTCTTACCATAGAAAATGGCCCGATAACTTGGGCCTTTCTTCTAAAAGACAACCTCA AATATAAACAAGGAATACTT
Downstream 100 bases:
>100_bases TTTCTATTGATGGCATTTTTCAGCATCCGGAGCAGTACCAGGATAGTGTTATGCTGGCAATCGGTGCTGGCCAGCTGCGG CGTCAGTTTCAATTATGATA
Product: single-strand binding protein family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MQQNNIFVGNLAAPLEMKGENDKLICKFTLIANEYIGKDLSTNESKYREVSIRFTGFGKVATRLEKALLVGDQVIASFSI SNNNYEREGKMVYGHNFIVQDFQLGAPGKARKERT
Sequences:
>Translated_115_residues MQQNNIFVGNLAAPLEMKGENDKLICKFTLIANEYIGKDLSTNESKYREVSIRFTGFGKVATRLEKALLVGDQVIASFSI SNNNYEREGKMVYGHNFIVQDFQLGAPGKARKERT >Mature_115_residues MQQNNIFVGNLAAPLEMKGENDKLICKFTLIANEYIGKDLSTNESKYREVSIRFTGFGKVATRLEKALLVGDQVIASFSI SNNNYEREGKMVYGHNFIVQDFQLGAPGKARKERT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12937; Mature: 12937
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS50935 SSB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQNNIFVGNLAAPLEMKGENDKLICKFTLIANEYIGKDLSTNESKYREVSIRFTGFGKV CCCCCEEEECCCCCEEECCCCCEEEEEEEEEECHHHCCCCCCCCCCEEEEEEEEECCCHH ATRLEKALLVGDQVIASFSISNNNYEREGKMVYGHNFIVQDFQLGAPGKARKERT HHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEECCEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MQQNNIFVGNLAAPLEMKGENDKLICKFTLIANEYIGKDLSTNESKYREVSIRFTGFGKV CCCCCEEEECCCCCEEECCCCCEEEEEEEEEECHHHCCCCCCCCCCEEEEEEEEECCCHH ATRLEKALLVGDQVIASFSISNNNYEREGKMVYGHNFIVQDFQLGAPGKARKERT HHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEECCEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA