Click here to switch to the map view.

The map label for this gene is 153930563

Identifier: 153930563

GI number: 153930563

Start: 18434

End: 20140

Strand: Direct

Name: 153930563

Synonym: YpsIP31758_A0060

Alternate gene names: NA

Gene position: 18434-20140 (Clockwise)

Preceding gene: 153930571

Following gene: 153930575

Centisome position: 31.41

GC content: 40.54

Gene sequence:

>1707_bases
ATGAAAATTAAATTAATAACTGCTTGTGTCATGGCGGCGCTGCTTTCTGGTTGCTCAATTGGCCGTATTAATAAAGTAAT
AGACTCCGCGCAGTCAGATTCTGAAAAAGTCAGCAATATGATTGCAGAAACGGCAACTGTTAGACCGCCAGTTAAAATCC
ATGATGAGCAATGGATTAACCCTATTCCGATTAAGTCAGCAACAGCAGATATTCCGGCAGCAATGATTAATTGCGTGATC
ACTTATAAACCAGTACGGCCTCAAGATGTGTATCAGTTCGGCCAGGACGTTACGCAGCAGTGCAATATTCCAGTTCGAAT
TTCACCTGATGCAGCCGCTATGTTATCAGGCAATAACAGCACTGGAGGGGGGGGACGGCCAACCAATCAAATGAGCAGCG
TTCCAGCTCCGATTGTTCCCCCTGAAGCTAACGGCATGGTTCCACTACAGACGTTGGGAACCATGCAACCAGGTAACAAT
GGTAGCGTGGCTTATAGCGGCGGTGTAGCCCGTAAAATTACAGATGTGGCATTCTCTGGCAACGTGGCACGTCTACTCGA
TATTGTCACCTCTCGCCTTGGCGTGTCGTGGCGATATGCAAACGGTGAAATCACTATTTTCTATCTCCAAACTAAGCGAT
TTGATATCGATACGACTAATGCAAAATATACATTAGAAAATCAGCAAAAAAGTGGCTTATCCACTCAAAGCGGAAGCAAT
GGCACTGGTGAAAAATCAAGTGGGATATCTGGTACTAGCGGCTCTAACACACTGCAAACAACTGAAATGTCGAATGATAT
CTATGGAGACATTCAAAAAACGGTTGAAAGTATGTTAACGCCAGGAGTAGGGCGAGTAAGCATAAATCAAACCTCTGGTG
TCGTTGTTGTAACCGATGTTCCCAACGTGGTGCGTAATATTGGTGAGTATCTGCAAGATGAGAACAGTAAACTTTCCAAA
CAGGTTTTATTTAAAGTTGTCATTTACACTATTACATCTGAAGTTTCTGATAATGTCGGAATTGATTGGGATATTATCTT
TAAATCCCTATCAGGAAAATATGGTATAAACCTTGCCAGCTCATCAGGATTAAGTACCGATTTGGCAAATGGGAGCTTTG
AAATTTTAGATACTGCTACAGGTAAAGCAGCTCAATTTGCCGGTTCTCAGTTCATGCTTCAAGCATTGTCAAAACAAGCG
AATGTAACAGATACAAAAACACTTAATTTGATGACCACAAACTTAGCTACGGCTGGTTTATTAATCGGTAAACAAACGAC
TTATTTACAGCGTTCATCTATAACTTCAATAGGTAGTGGTAATTCTTCTGAACCGGTTCAGTCATTAGAACCAGGACAAA
TAACCACTGGTACTAATATTGTTATATTACCAAAAATATTAAATGATAATGAAAAGATGATGTTGACAATGATGTTAGAT
ATAACGTCATTAAATAAATTAAGGAAAATAGATACCGCAGATAAAAAATTAAGTATTGAAGGGCCGGATTCTGATTCCAG
TTCTATTCCACAACGGATTTGGTTGAAACCAGGTGAAACAATCCTAATGAGTGGCTTTGAACAGATTGTGAAGGATGGCA
GTAAGCAGGGCATGGGTGATCCTAATAATATTATAATGGGCGGTAACATGTCGGGCAGTGATAAGAAACAGTCCTTCGTC
ATTACTATTACGCCTATTCTTCGCTAA

Upstream 100 bases:

>100_bases
TAAAAAAGCAAATTCCCCGTTATTTATTGATGTATATAAAACACAATGTTTAATAATTGTTAGCGATGCTAGCGAAAATA
AAAAATAATTTGGGCGACAT

Downstream 100 bases:

>100_bases
GGAGTATTTATGGCTACTGAAACGAAGGAAAGGAAAAAGATACGGGTAGTAACTTATAACAATAAACAATTTGTCGTCGG
GCTGGAATGGAGAAGTATTA

Product: PilN family type IV pilus biogenesis protein

Products: NA

Alternate protein names: Type II Secretory Pathway Component PulD-Like Protein; Type II And III Secretion System Protein; PilN Family Type IV Pilus Biogenesis Protein; PilN Type IV Pilus Biogenesis Outer Membrane Protein; Type IV Pilus Outer Membrane Secretin Lipoprotein; PilN Protein; Type IV Pilus Biogenesis Protein PilN; Type IV Pilus Protein PilN; Type IV Pilus Formation Outer Membrane Protein; Type IV Pilus Operon Lipoprotein; PilN-Like Type II And III Secretion System Protein; Type IV Pilus Outer Membrane Secretin Lipoprotein PilN; Conjugal Transfer Protein; Pillus Assembly Protein; Type II Secretory Pathway Component PulD; Lipoprotein

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MKIKLITACVMAALLSGCSIGRINKVIDSAQSDSEKVSNMIAETATVRPPVKIHDEQWINPIPIKSATADIPAAMINCVI
TYKPVRPQDVYQFGQDVTQQCNIPVRISPDAAAMLSGNNSTGGGGRPTNQMSSVPAPIVPPEANGMVPLQTLGTMQPGNN
GSVAYSGGVARKITDVAFSGNVARLLDIVTSRLGVSWRYANGEITIFYLQTKRFDIDTTNAKYTLENQQKSGLSTQSGSN
GTGEKSSGISGTSGSNTLQTTEMSNDIYGDIQKTVESMLTPGVGRVSINQTSGVVVVTDVPNVVRNIGEYLQDENSKLSK
QVLFKVVIYTITSEVSDNVGIDWDIIFKSLSGKYGINLASSSGLSTDLANGSFEILDTATGKAAQFAGSQFMLQALSKQA
NVTDTKTLNLMTTNLATAGLLIGKQTTYLQRSSITSIGSGNSSEPVQSLEPGQITTGTNIVILPKILNDNEKMMLTMMLD
ITSLNKLRKIDTADKKLSIEGPDSDSSSIPQRIWLKPGETILMSGFEQIVKDGSKQGMGDPNNIIMGGNMSGSDKKQSFV
ITITPILR

Sequences:

>Translated_568_residues
MKIKLITACVMAALLSGCSIGRINKVIDSAQSDSEKVSNMIAETATVRPPVKIHDEQWINPIPIKSATADIPAAMINCVI
TYKPVRPQDVYQFGQDVTQQCNIPVRISPDAAAMLSGNNSTGGGGRPTNQMSSVPAPIVPPEANGMVPLQTLGTMQPGNN
GSVAYSGGVARKITDVAFSGNVARLLDIVTSRLGVSWRYANGEITIFYLQTKRFDIDTTNAKYTLENQQKSGLSTQSGSN
GTGEKSSGISGTSGSNTLQTTEMSNDIYGDIQKTVESMLTPGVGRVSINQTSGVVVVTDVPNVVRNIGEYLQDENSKLSK
QVLFKVVIYTITSEVSDNVGIDWDIIFKSLSGKYGINLASSSGLSTDLANGSFEILDTATGKAAQFAGSQFMLQALSKQA
NVTDTKTLNLMTTNLATAGLLIGKQTTYLQRSSITSIGSGNSSEPVQSLEPGQITTGTNIVILPKILNDNEKMMLTMMLD
ITSLNKLRKIDTADKKLSIEGPDSDSSSIPQRIWLKPGETILMSGFEQIVKDGSKQGMGDPNNIIMGGNMSGSDKKQSFV
ITITPILR
>Mature_568_residues
MKIKLITACVMAALLSGCSIGRINKVIDSAQSDSEKVSNMIAETATVRPPVKIHDEQWINPIPIKSATADIPAAMINCVI
TYKPVRPQDVYQFGQDVTQQCNIPVRISPDAAAMLSGNNSTGGGGRPTNQMSSVPAPIVPPEANGMVPLQTLGTMQPGNN
GSVAYSGGVARKITDVAFSGNVARLLDIVTSRLGVSWRYANGEITIFYLQTKRFDIDTTNAKYTLENQQKSGLSTQSGSN
GTGEKSSGISGTSGSNTLQTTEMSNDIYGDIQKTVESMLTPGVGRVSINQTSGVVVVTDVPNVVRNIGEYLQDENSKLSK
QVLFKVVIYTITSEVSDNVGIDWDIIFKSLSGKYGINLASSSGLSTDLANGSFEILDTATGKAAQFAGSQFMLQALSKQA
NVTDTKTLNLMTTNLATAGLLIGKQTTYLQRSSITSIGSGNSSEPVQSLEPGQITTGTNIVILPKILNDNEKMMLTMMLD
ITSLNKLRKIDTADKKLSIEGPDSDSSSIPQRIWLKPGETILMSGFEQIVKDGSKQGMGDPNNIIMGGNMSGSDKKQSFV
ITITPILR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60532; Mature: 60532

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKLITACVMAALLSGCSIGRINKVIDSAQSDSEKVSNMIAETATVRPPVKIHDEQWIN
CEEEHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCCC
PIPIKSATADIPAAMINCVITYKPVRPQDVYQFGQDVTQQCNIPVRISPDAAAMLSGNNS
CCCCCCCCCCCHHHHEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCC
TGGGGRPTNQMSSVPAPIVPPEANGMVPLQTLGTMQPGNNGSVAYSGGVARKITDVAFSG
CCCCCCCCCHHHCCCCCCCCCCCCCEEEHHHHCCCCCCCCCCEEECCCCHHHHHHHHCCC
NVARLLDIVTSRLGVSWRYANGEITIFYLQTKRFDIDTTNAKYTLENQQKSGLSTQSGSN
CHHHHHHHHHHHHCCEEEEECCCEEEEEEEEEEEEEECCCCEEEECCCHHCCCCCCCCCC
GTGEKSSGISGTSGSNTLQTTEMSNDIYGDIQKTVESMLTPGVGRVSINQTSGVVVVTDV
CCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECC
PNVVRNIGEYLQDENSKLSKQVLFKVVIYTITSEVSDNVGIDWDIIFKSLSGKYGINLAS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEC
SSGLSTDLANGSFEILDTATGKAAQFAGSQFMLQALSKQANVTDTKTLNLMTTNLATAGL
CCCCCCCCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHCCCCCCCEEEEEEEECHHHHHE
LIGKQTTYLQRSSITSIGSGNSSEPVQSLEPGQITTGTNIVILPKILNDNEKMMLTMMLD
EECCCCCEEECCCCCCCCCCCCCCCHHCCCCCCEECCCCEEEEEHHHCCCCEEEEEEEHH
ITSLNKLRKIDTADKKLSIEGPDSDSSSIPQRIWLKPGETILMSGFEQIVKDGSKQGMGD
HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCC
PNNIIMGGNMSGSDKKQSFVITITPILR
CCCEEECCCCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MKIKLITACVMAALLSGCSIGRINKVIDSAQSDSEKVSNMIAETATVRPPVKIHDEQWIN
CEEEHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCCC
PIPIKSATADIPAAMINCVITYKPVRPQDVYQFGQDVTQQCNIPVRISPDAAAMLSGNNS
CCCCCCCCCCCHHHHEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCC
TGGGGRPTNQMSSVPAPIVPPEANGMVPLQTLGTMQPGNNGSVAYSGGVARKITDVAFSG
CCCCCCCCCHHHCCCCCCCCCCCCCEEEHHHHCCCCCCCCCCEEECCCCHHHHHHHHCCC
NVARLLDIVTSRLGVSWRYANGEITIFYLQTKRFDIDTTNAKYTLENQQKSGLSTQSGSN
CHHHHHHHHHHHHCCEEEEECCCEEEEEEEEEEEEEECCCCEEEECCCHHCCCCCCCCCC
GTGEKSSGISGTSGSNTLQTTEMSNDIYGDIQKTVESMLTPGVGRVSINQTSGVVVVTDV
CCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECC
PNVVRNIGEYLQDENSKLSKQVLFKVVIYTITSEVSDNVGIDWDIIFKSLSGKYGINLAS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEC
SSGLSTDLANGSFEILDTATGKAAQFAGSQFMLQALSKQANVTDTKTLNLMTTNLATAGL
CCCCCCCCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHCCCCCCCEEEEEEEECHHHHHE
LIGKQTTYLQRSSITSIGSGNSSEPVQSLEPGQITTGTNIVILPKILNDNEKMMLTMMLD
EECCCCCEEECCCCCCCCCCCCCCCHHCCCCCCEECCCCEEEEEHHHCCCCEEEEEEEHH
ITSLNKLRKIDTADKKLSIEGPDSDSSSIPQRIWLKPGETILMSGFEQIVKDGSKQGMGD
HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCC
PNNIIMGGNMSGSDKKQSFVITITPILR
CCCEEECCCCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA