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The map label for this gene is yndE [H]

Identifier: 153937870

GI number: 153937870

Start: 2036744

End: 2037829

Strand: Direct

Name: yndE [H]

Synonym: CLC_1921

Alternate gene names: 153937870

Gene position: 2036744-2037829 (Clockwise)

Preceding gene: 153937679

Following gene: 153934905

Centisome position: 54.16

GC content: 25.51

Gene sequence:

>1086_bases
ATGGTTAATAATGAAGAAGATTTTTTAACCGAGCATCAACTCACCCTTATACTTATAGGTTGTATGGTTGGTGTAGGAAT
ATTAAGTTTGCCAAAATATGTAGCAAAAATAGCAAAACAAGATAGCTGGATATCTGTACTATTAGGGACACTTAACCCCT
TATATATTACCTTTGTAACTTCATATATAAGAAAAAAGCATCCAAAAGAAGATATTCTAGATTTAAGCAAAAAAATTTAT
GGTAATATACTTGGAAATATATTAAATTTAATATTTTTATTATTCTTTTTTATAATAGCTACAGACCTTACTGCAGAAAT
AAATAATATATTAAAAATTTATATGGTTCCTTTCCTAAGCTATTGGAATCTAGCAAGCTTACTGTTTTTGTTTGTGGCTT
ATGCCTCTTATGGCGGAATAAAAGTAATAGGAAAAATAAATGAAATATTATTTTATGCTACATTTATAGTTTTTTTAATT
CCTCTTTTTTCCTTAAAAAATGCAAACATAACAAACTTACAACCAGTGCTTGGAGTGGGAATAAAAAATATTATAAAAGG
TATTAAAGAAACCGCCATTTCTTATTCAGGCTTTGAAATATTATTGATATTCTATCCTTTTATAAACCGAAATGTGAAAA
TAAAAAAACCAGCTTTTAAGAGTATAACATTTACAGCAATATTATATACTCTATATACTTTGAGTACCATATTATATCTT
GGAATTAATGCATCACAAAAATTTTTATGGCCTGTTATCACCATAACTCAAAGTATAATAGTTCCTATAATAAATTCATT
TAAATATATTTTTTTATCTCTATGGACTATGACCATGTTTAAATGTATTTCTATATATTACTATACCTTTACTTATGGTT
TAGACAAGGTATTTAAAAAAATTAGCAGAAAAAATTGGATAATAATCTTCTATCCTATAATGATTATAGGATCAAGTTTA
TACGACGGTCCCACTGTTAGGCAAAGTTTAATAGAAAAAATATTTAATTATTATATACCTTACAACATATTATTTATTGG
TATTACTGCTCTATTAGTAGCCTTAAAGAAAAATGATGAAAATTGA

Upstream 100 bases:

>100_bases
GAAATTCCTATTTGAAAAATGGACAAAAATCATAAATTATCTCAATTTGGGCTTAACTATATAAAACAGATTGAAAAAAA
TTTGTTTAGGAGAGAAAATA

Downstream 100 bases:

>100_bases
TTTATATTTTTTGTATAGTTGCTTTATGCTAAGGGAATAATTATTTTATGTATAATATTTCTTATAAAGGGGTGAGGTGT
TTATGAAAAATAAGAACCTA

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MVNNEEDFLTEHQLTLILIGCMVGVGILSLPKYVAKIAKQDSWISVLLGTLNPLYITFVTSYIRKKHPKEDILDLSKKIY
GNILGNILNLIFLLFFFIIATDLTAEINNILKIYMVPFLSYWNLASLLFLFVAYASYGGIKVIGKINEILFYATFIVFLI
PLFSLKNANITNLQPVLGVGIKNIIKGIKETAISYSGFEILLIFYPFINRNVKIKKPAFKSITFTAILYTLYTLSTILYL
GINASQKFLWPVITITQSIIVPIINSFKYIFLSLWTMTMFKCISIYYYTFTYGLDKVFKKISRKNWIIIFYPIMIIGSSL
YDGPTVRQSLIEKIFNYYIPYNILFIGITALLVALKKNDEN

Sequences:

>Translated_361_residues
MVNNEEDFLTEHQLTLILIGCMVGVGILSLPKYVAKIAKQDSWISVLLGTLNPLYITFVTSYIRKKHPKEDILDLSKKIY
GNILGNILNLIFLLFFFIIATDLTAEINNILKIYMVPFLSYWNLASLLFLFVAYASYGGIKVIGKINEILFYATFIVFLI
PLFSLKNANITNLQPVLGVGIKNIIKGIKETAISYSGFEILLIFYPFINRNVKIKKPAFKSITFTAILYTLYTLSTILYL
GINASQKFLWPVITITQSIIVPIINSFKYIFLSLWTMTMFKCISIYYYTFTYGLDKVFKKISRKNWIIIFYPIMIIGSSL
YDGPTVRQSLIEKIFNYYIPYNILFIGITALLVALKKNDEN
>Mature_361_residues
MVNNEEDFLTEHQLTLILIGCMVGVGILSLPKYVAKIAKQDSWISVLLGTLNPLYITFVTSYIRKKHPKEDILDLSKKIY
GNILGNILNLIFLLFFFIIATDLTAEINNILKIYMVPFLSYWNLASLLFLFVAYASYGGIKVIGKINEILFYATFIVFLI
PLFSLKNANITNLQPVLGVGIKNIIKGIKETAISYSGFEILLIFYPFINRNVKIKKPAFKSITFTAILYTLYTLSTILYL
GINASQKFLWPVITITQSIIVPIINSFKYIFLSLWTMTMFKCISIYYYTFTYGLDKVFKKISRKNWIIIFYPIMIIGSSL
YDGPTVRQSLIEKIFNYYIPYNILFIGITALLVALKKNDEN

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 41430; Mature: 41430

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNNEEDFLTEHQLTLILIGCMVGVGILSLPKYVAKIAKQDSWISVLLGTLNPLYITFVT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHH
SYIRKKHPKEDILDLSKKIYGNILGNILNLIFLLFFFIIATDLTAEINNILKIYMVPFLS
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWNLASLLFLFVAYASYGGIKVIGKINEILFYATFIVFLIPLFSLKNANITNLQPVLGVG
HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
IKNIIKGIKETAISYSGFEILLIFYPFINRNVKIKKPAFKSITFTAILYTLYTLSTILYL
HHHHHHHHHHHHCCCCCHHHHHEEEHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH
GINASQKFLWPVITITQSIIVPIINSFKYIFLSLWTMTMFKCISIYYYTFTYGLDKVFKK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISRKNWIIIFYPIMIIGSSLYDGPTVRQSLIEKIFNYYIPYNILFIGITALLVALKKNDE
HCCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
N
C
>Mature Secondary Structure
MVNNEEDFLTEHQLTLILIGCMVGVGILSLPKYVAKIAKQDSWISVLLGTLNPLYITFVT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHH
SYIRKKHPKEDILDLSKKIYGNILGNILNLIFLLFFFIIATDLTAEINNILKIYMVPFLS
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWNLASLLFLFVAYASYGGIKVIGKINEILFYATFIVFLIPLFSLKNANITNLQPVLGVG
HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
IKNIIKGIKETAISYSGFEILLIFYPFINRNVKIKKPAFKSITFTAILYTLYTLSTILYL
HHHHHHHHHHHHCCCCCHHHHHEEEHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH
GINASQKFLWPVITITQSIIVPIINSFKYIFLSLWTMTMFKCISIYYYTFTYGLDKVFKK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISRKNWIIIFYPIMIIGSSLYDGPTVRQSLIEKIFNYYIPYNILFIGITALLVALKKNDE
HCCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]