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The map label for this gene is yknX [H]

Identifier: 153937786

GI number: 153937786

Start: 108702

End: 109763

Strand: Direct

Name: yknX [H]

Synonym: CLC_0132

Alternate gene names: 153937786

Gene position: 108702-109763 (Clockwise)

Preceding gene: 153936181

Following gene: 153934714

Centisome position: 2.89

GC content: 28.91

Gene sequence:

>1062_bases
ATGAAAAAGAAGACTATTATAATTACCGGAGTAGTATTGCTAATTGGCTTATTCGTAATTTTAGGAATTTTTAAAAGCAA
AAAAAATAGCAACATAAGTGTAAAGACTATTAAAGTAACTAAAGGAAATGTAGAATCATATCTATCAACAACAGGTAATG
TAGTGTCCAAAAATAAAAAAGAATATTTTGGTGGACAAGCAAAGGTTAAGAAAGTTAATGTTAAAGTTGGAGATAAAGTA
AAAAAAGGACAATCTTTATTAAACTTTGATATGTCTGAATTAGAAAATGACAGACAAGTGGCTCAAATGGAATATGACAA
TGCTATTTCACAAAAGAAGGCATTAAAGTCTCAAAAAAATTCTGAGCAAAATAAAATGAATTCTATAACAAATAGCCAAA
TTGAACAAGTAGAAAATGCTGTTCGATTAGCTGAATTAAAATTAGAATCTGTTAATTATAAAATAAATGAAAGTGAAGAA
ACCGTTGCTGATATTGATGGTATAGTAACAGAGGTTAATGCACAGGCAGGTGGAATAAGCACAGGACAAGGACAACCTTT
GGTAGTAGTTGAAAATGTAGATGACTTAAAAGTAGCTGTATCTTTAGGTAAATATGATTCTACAAAGGTTAAAAAAGGAA
TGAAAGCATTTGTTAAAAATGATGACAAAAAGTATGAAGCAAAAGTAGATTTTATAGCTCCTACAGCTAAAAAGACTGTT
AAGGAAGCGGGAGGCGGAAATGACACTACATTAGATTGTGAAATATATCTTTCTAAAAATAATACTAAGGACTTAAGAAT
TGGTTTTGACGTAGATGTAGATATACTATTAGGAGAATCAAAAAATGTATTAAAAATACCATTAGAAAGTATAAAAACAG
ATAAATATAATAAATCACATGTATATGTTGTAGAAGAAGGAAAAGTTAAAGAAAAACCAGTACAGTTAGGAACACAGTCA
GATATGGAAGCTGAAATTATAAGTGGATTAAAATCAGGAGAAAAGGTTATATTAAATCCTAATGCTTCAATTAAAACAGG
TGTTAGCGTACAAGAAAAGTAG

Upstream 100 bases:

>100_bases
AATTTTTAAAATTATCTTATTTTTACCTTTTATCCATTTAATAAATTAGATTTATAAACTATAATTAAATAAATATATAA
TATTTTTATAGGAGGCAAAT

Downstream 100 bases:

>100_bases
GTGATAAAAATTGTTAATAGTTAAAGATATAGAAAAAACTTATAATACAGGAGAAATAAGTTTTAAAGCTTTAAAAGGAA
TATCTTTAAAAATAGAAAGA

Product: RND family marcrolide efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MKKKTIIITGVVLLIGLFVILGIFKSKKNSNISVKTIKVTKGNVESYLSTTGNVVSKNKKEYFGGQAKVKKVNVKVGDKV
KKGQSLLNFDMSELENDRQVAQMEYDNAISQKKALKSQKNSEQNKMNSITNSQIEQVENAVRLAELKLESVNYKINESEE
TVADIDGIVTEVNAQAGGISTGQGQPLVVVENVDDLKVAVSLGKYDSTKVKKGMKAFVKNDDKKYEAKVDFIAPTAKKTV
KEAGGGNDTTLDCEIYLSKNNTKDLRIGFDVDVDILLGESKNVLKIPLESIKTDKYNKSHVYVVEEGKVKEKPVQLGTQS
DMEAEIISGLKSGEKVILNPNASIKTGVSVQEK

Sequences:

>Translated_353_residues
MKKKTIIITGVVLLIGLFVILGIFKSKKNSNISVKTIKVTKGNVESYLSTTGNVVSKNKKEYFGGQAKVKKVNVKVGDKV
KKGQSLLNFDMSELENDRQVAQMEYDNAISQKKALKSQKNSEQNKMNSITNSQIEQVENAVRLAELKLESVNYKINESEE
TVADIDGIVTEVNAQAGGISTGQGQPLVVVENVDDLKVAVSLGKYDSTKVKKGMKAFVKNDDKKYEAKVDFIAPTAKKTV
KEAGGGNDTTLDCEIYLSKNNTKDLRIGFDVDVDILLGESKNVLKIPLESIKTDKYNKSHVYVVEEGKVKEKPVQLGTQS
DMEAEIISGLKSGEKVILNPNASIKTGVSVQEK
>Mature_353_residues
MKKKTIIITGVVLLIGLFVILGIFKSKKNSNISVKTIKVTKGNVESYLSTTGNVVSKNKKEYFGGQAKVKKVNVKVGDKV
KKGQSLLNFDMSELENDRQVAQMEYDNAISQKKALKSQKNSEQNKMNSITNSQIEQVENAVRLAELKLESVNYKINESEE
TVADIDGIVTEVNAQAGGISTGQGQPLVVVENVDDLKVAVSLGKYDSTKVKKGMKAFVKNDDKKYEAKVDFIAPTAKKTV
KEAGGGNDTTLDCEIYLSKNNTKDLRIGFDVDVDILLGESKNVLKIPLESIKTDKYNKSHVYVVEEGKVKEKPVQLGTQS
DMEAEIISGLKSGEKVILNPNASIKTGVSVQEK

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081796, Length=369, Percent_Identity=24.1192411924119, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38655; Mature: 38655

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKTIIITGVVLLIGLFVILGIFKSKKNSNISVKTIKVTKGNVESYLSTTGNVVSKNKK
CCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHCCCCHHCCCCH
EYFGGQAKVKKVNVKVGDKVKKGQSLLNFDMSELENDRQVAQMEYDNAISQKKALKSQKN
HHCCCCEEEEEEEEEECCCHHHCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
SEQNKMNSITNSQIEQVENAVRLAELKLESVNYKINESEETVADIDGIVTEVNAQAGGIS
CHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEECCCHHHHHHHHHHHEEECCCCCCCC
TGQGQPLVVVENVDDLKVAVSLGKYDSTKVKKGMKAFVKNDDKKYEAKVDFIAPTAKKTV
CCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHH
KEAGGGNDTTLDCEIYLSKNNTKDLRIGFDVDVDILLGESKNVLKIPLESIKTDKYNKSH
HHCCCCCCCEEEEEEEEECCCCCEEEEECCCEEEEEECCCCCEEEEEHHHCCCCCCCCCE
VYVVEEGKVKEKPVQLGTQSDMEAEIISGLKSGEKVILNPNASIKTGVSVQEK
EEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCEECCCEECCC
>Mature Secondary Structure
MKKKTIIITGVVLLIGLFVILGIFKSKKNSNISVKTIKVTKGNVESYLSTTGNVVSKNKK
CCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHCCCCHHCCCCH
EYFGGQAKVKKVNVKVGDKVKKGQSLLNFDMSELENDRQVAQMEYDNAISQKKALKSQKN
HHCCCCEEEEEEEEEECCCHHHCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
SEQNKMNSITNSQIEQVENAVRLAELKLESVNYKINESEETVADIDGIVTEVNAQAGGIS
CHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEECCCHHHHHHHHHHHEEECCCCCCCC
TGQGQPLVVVENVDDLKVAVSLGKYDSTKVKKGMKAFVKNDDKKYEAKVDFIAPTAKKTV
CCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHH
KEAGGGNDTTLDCEIYLSKNNTKDLRIGFDVDVDILLGESKNVLKIPLESIKTDKYNKSH
HHCCCCCCCEEEEEEEEECCCCCEEEEECCCEEEEEECCCCCEEEEEHHHCCCCCCCCCE
VYVVEEGKVKEKPVQLGTQSDMEAEIISGLKSGEKVILNPNASIKTGVSVQEK
EEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCEECCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]