Click here to switch to the map view.

The map label for this gene is hag [H]

Identifier: 153937683

GI number: 153937683

Start: 279350

End: 280201

Strand: Direct

Name: hag [H]

Synonym: CLC_0300

Alternate gene names: 153937683

Gene position: 279350-280201 (Clockwise)

Preceding gene: 153936946

Following gene: 153937341

Centisome position: 7.43

GC content: 38.97

Gene sequence:

>852_bases
ATGATAATTAATCATAATGTGAATGCTATGATTGCATATAGAAATATTATGATAAATGGTGCTTTGGCTGGGAAAGCCAT
GGAAAGGCTTGCTTCAGGCATGAGAATCAATAGGGCATCTGATGATCCAGCAGGACTTGCAATTTCAGAAAAGATGAGAG
CACAGATAAGAGGCCTGGAAATGGCATCAAGAAATGTTCAAGATGGCATTTCTATGATACAGGTTGCAGAAGGCGGAGTG
AAGGAAATTCAATCTATGCTTCAAAGAATGAGAGAGTTGGCAGTACAAGCAGCTAATGGTACAAATTCTCCAGAGGACAG
AAAGAATATCCAAGATGAAATTAATCAGTTGACCAGAGGAATTGATGATATTGCAAATGGTACGGAATTCAACACCATCA
AGATTTTGAATGCTAATGCAGCAGATGCAGGAGAAGTAAAGCTGCAAATAGGAGCCAACGAAGGCCAATTCTTTGGAATA
AAACTTCAAAATATGAATTCTGCGGCTTTGGGGATAAATGGGAATACGGACAAGGACGGGGTAGATGTTTCCACCTCAGA
AAAGGCGTCAGCAGCTATAAAAGTCTTTGATGATGCCATAAATAAAACCTCATCCTTCATGTCCAGTCTGGGAGCATCAT
CAAATATGTTAGAGCATAGGATTAATTATTTGGAAAATACAATAGGCAATTTGACAGAAGCGGAATCAAGAATCAGGGAT
GCCGACATGGCAAAGGAAATGATGAATTACACTAAGTACAGTGTTCTTCAACAAGTAGCCCAAGCAATATTTTCGCAAGT
GCTCAAGCAACAAGAAAGTACAATTCAATTGCTGAAGTCTTTGAACAACTAA

Upstream 100 bases:

>100_bases
TTTATATGTATTATGGGATAAATGTAAACATTATGATATAATAAAAATAGTTACCATATGTGAATATGCAGTGTGTAATA
CCATGAGAGGGGATATTGTT

Downstream 100 bases:

>100_bases
AATATGAATATTAAAAAGAAAAATTATGCTAAGTACCAATCTATGGAAGTATGTATTAAACATATTTAGTGTGAAGATAG
AATGTAGATATTTTAATTAA

Product: flagellin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MIINHNVNAMIAYRNIMINGALAGKAMERLASGMRINRASDDPAGLAISEKMRAQIRGLEMASRNVQDGISMIQVAEGGV
KEIQSMLQRMRELAVQAANGTNSPEDRKNIQDEINQLTRGIDDIANGTEFNTIKILNANAADAGEVKLQIGANEGQFFGI
KLQNMNSAALGINGNTDKDGVDVSTSEKASAAIKVFDDAINKTSSFMSSLGASSNMLEHRINYLENTIGNLTEAESRIRD
ADMAKEMMNYTKYSVLQQVAQAIFSQVLKQQESTIQLLKSLNN

Sequences:

>Translated_283_residues
MIINHNVNAMIAYRNIMINGALAGKAMERLASGMRINRASDDPAGLAISEKMRAQIRGLEMASRNVQDGISMIQVAEGGV
KEIQSMLQRMRELAVQAANGTNSPEDRKNIQDEINQLTRGIDDIANGTEFNTIKILNANAADAGEVKLQIGANEGQFFGI
KLQNMNSAALGINGNTDKDGVDVSTSEKASAAIKVFDDAINKTSSFMSSLGASSNMLEHRINYLENTIGNLTEAESRIRD
ADMAKEMMNYTKYSVLQQVAQAIFSQVLKQQESTIQLLKSLNN
>Mature_283_residues
MIINHNVNAMIAYRNIMINGALAGKAMERLASGMRINRASDDPAGLAISEKMRAQIRGLEMASRNVQDGISMIQVAEGGV
KEIQSMLQRMRELAVQAANGTNSPEDRKNIQDEINQLTRGIDDIANGTEFNTIKILNANAADAGEVKLQIGANEGQFFGI
KLQNMNSAALGINGNTDKDGVDVSTSEKASAAIKVFDDAINKTSSFMSSLGASSNMLEHRINYLENTIGNLTEAESRIRD
ADMAKEMMNYTKYSVLQQVAQAIFSQVLKQQESTIQLLKSLNN

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=190, Percent_Identity=42.1052631578947, Blast_Score=140, Evalue=8e-35,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 30805; Mature: 30805

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIINHNVNAMIAYRNIMINGALAGKAMERLASGMRINRASDDPAGLAISEKMRAQIRGLE
CEECCCCCEEEEEEHHEEECHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHH
MASRNVQDGISMIQVAEGGVKEIQSMLQRMRELAVQAANGTNSPEDRKNIQDEINQLTRG
HHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
IDDIANGTEFNTIKILNANAADAGEVKLQIGANEGQFFGIKLQNMNSAALGINGNTDKDG
HHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCCC
VDVSTSEKASAAIKVFDDAINKTSSFMSSLGASSNMLEHRINYLENTIGNLTEAESRIRD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADMAKEMMNYTKYSVLQQVAQAIFSQVLKQQESTIQLLKSLNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIINHNVNAMIAYRNIMINGALAGKAMERLASGMRINRASDDPAGLAISEKMRAQIRGLE
CEECCCCCEEEEEEHHEEECHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHH
MASRNVQDGISMIQVAEGGVKEIQSMLQRMRELAVQAANGTNSPEDRKNIQDEINQLTRG
HHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
IDDIANGTEFNTIKILNANAADAGEVKLQIGANEGQFFGIKLQNMNSAALGINGNTDKDG
HHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEECCCCCCCCC
VDVSTSEKASAAIKVFDDAINKTSSFMSSLGASSNMLEHRINYLENTIGNLTEAESRIRD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADMAKEMMNYTKYSVLQQVAQAIFSQVLKQQESTIQLLKSLNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1479346; 11058132 [H]