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The map label for this gene is nifE [H]

Identifier: 153937640

GI number: 153937640

Start: 768341

End: 769579

Strand: Direct

Name: nifE [H]

Synonym: CLC_0746

Alternate gene names: 153937640

Gene position: 768341-769579 (Clockwise)

Preceding gene: 153936696

Following gene: 153934557

Centisome position: 20.43

GC content: 36.0

Gene sequence:

>1239_bases
TTGGGAATTCATAAGTTCAAACCACCAATGTCAGGTAGAATGGGAGTATTATGGACTCTTGCTTCAATTCGTGATGCAGC
TTTAATTGAATACGGATGCATGGGACATATGCAGTATGGGAGAATGTTTTTAAATCAAGCTGGTATATCCAGAGGGTGCA
AACTATATTCTACTCACATTGACGAAACAGACATTTCATTAGGAGATACTAGAAGACTCAATCGTACTATTGCTCAAATT
GTAGAAAGAGATAAGCCTAAAATTATTTTTTTGTTGCCATCCTCAGTGCCAACAGTTATTGGAACAGACTTAGTGGCTAT
ATGTGAAGAGCTACAACCGGAATACCCTAATACTTTTTTACTTCCATTTGGATGTGGAGGCTTTGATATAGATGGGCATC
GTGGTGTAAAGGAAGCACTTTTACTTTTAGCAAAAACATTGCCAAAGGGTATAGAAAAAACAGGAGAGCCTACATTTAAC
ATAATTGGATCTTGTGCTGATTTATTTCGTTTTCATGCTGATGCAGAAGAGATTATCCGTATAATGAAGGGTGCATTTGG
TATGGAGAAACTTTGCGTTATGACCTCTGATACATCTGTAGAACAAATTGAGAATATGGGTGGTGCCCACATTAATTTAG
TGATACGACAGGAAGGAGAACCCGCTGCAAAACAATTAAAGGAGCGATTTGGAACTCCATATTTATTGGCTAGACCCTAT
GGAATTAAGGGAACCTTAGAATGGATAGATAAGATAGTTAAAATTTCTGGGTTAACTTTAGATAATAGTTTTATAAAATC
AGAAAAAGAAAAAAGTATGAGTCAAATTTCACCTGCAATTTCTGCTTTTCAACATGTAATACGAGAACATCCTGATGAAG
CAAGAATTTCATTAGGAGGTCATAGAGATGTAGTAAAAGGTATTCTTTCCTATGCAGAAGAAGAATTATCCTTAATTAGA
GGAACCTGTTGGTGCGACTCAGAAGCTATGGCAAGTGAAGAAATTCCTTATTTTTCAGAAACTGAATGGGTACAGGCTAT
ATCATCGGAGAAAAAGGGACTTCTAATGGCAAGTGGAGAAGCTTTGAAATGGGCAAAAGGAAATATAGATCTTCAAATAT
CTAACCCAGATATAAAATGGAGACTAAATCCTTATGAATCTCCATTTATTGGCTTTCGCGGAGCCATAAATTTAGTTAAT
TTATGGCTTAATGGGCTTTTAGAGCAAATAAATGATTAA

Upstream 100 bases:

>100_bases
AATCGCAGTTTTATTAAGTAGAATGTTAAAGGTTTATAGTAAAATAAATGTTAAAAAATAAGGAGGTAAAGTAAATGTTA
AAAAATAAGGAGGTAAGGTT

Downstream 100 bases:

>100_bases
ATATATACTCTTAATATCTTATATTACAAAAGTTGTTGAATTTAAACCCAATGCTAAAATAATTATTTAATATTTAATTG
AAATATTAGGACTTACTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MGIHKFKPPMSGRMGVLWTLASIRDAALIEYGCMGHMQYGRMFLNQAGISRGCKLYSTHIDETDISLGDTRRLNRTIAQI
VERDKPKIIFLLPSSVPTVIGTDLVAICEELQPEYPNTFLLPFGCGGFDIDGHRGVKEALLLLAKTLPKGIEKTGEPTFN
IIGSCADLFRFHADAEEIIRIMKGAFGMEKLCVMTSDTSVEQIENMGGAHINLVIRQEGEPAAKQLKERFGTPYLLARPY
GIKGTLEWIDKIVKISGLTLDNSFIKSEKEKSMSQISPAISAFQHVIREHPDEARISLGGHRDVVKGILSYAEEELSLIR
GTCWCDSEAMASEEIPYFSETEWVQAISSEKKGLLMASGEALKWAKGNIDLQISNPDIKWRLNPYESPFIGFRGAINLVN
LWLNGLLEQIND

Sequences:

>Translated_412_residues
MGIHKFKPPMSGRMGVLWTLASIRDAALIEYGCMGHMQYGRMFLNQAGISRGCKLYSTHIDETDISLGDTRRLNRTIAQI
VERDKPKIIFLLPSSVPTVIGTDLVAICEELQPEYPNTFLLPFGCGGFDIDGHRGVKEALLLLAKTLPKGIEKTGEPTFN
IIGSCADLFRFHADAEEIIRIMKGAFGMEKLCVMTSDTSVEQIENMGGAHINLVIRQEGEPAAKQLKERFGTPYLLARPY
GIKGTLEWIDKIVKISGLTLDNSFIKSEKEKSMSQISPAISAFQHVIREHPDEARISLGGHRDVVKGILSYAEEELSLIR
GTCWCDSEAMASEEIPYFSETEWVQAISSEKKGLLMASGEALKWAKGNIDLQISNPDIKWRLNPYESPFIGFRGAINLVN
LWLNGLLEQIND
>Mature_411_residues
GIHKFKPPMSGRMGVLWTLASIRDAALIEYGCMGHMQYGRMFLNQAGISRGCKLYSTHIDETDISLGDTRRLNRTIAQIV
ERDKPKIIFLLPSSVPTVIGTDLVAICEELQPEYPNTFLLPFGCGGFDIDGHRGVKEALLLLAKTLPKGIEKTGEPTFNI
IGSCADLFRFHADAEEIIRIMKGAFGMEKLCVMTSDTSVEQIENMGGAHINLVIRQEGEPAAKQLKERFGTPYLLARPYG
IKGTLEWIDKIVKISGLTLDNSFIKSEKEKSMSQISPAISAFQHVIREHPDEARISLGGHRDVVKGILSYAEEELSLIRG
TCWCDSEAMASEEIPYFSETEWVQAISSEKKGLLMASGEALKWAKGNIDLQISNPDIKWRLNPYESPFIGFRGAINLVNL
WLNGLLEQIND

Specific function: This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor) [H]

COG id: COG2710

COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifD/nifK/nifE/nifN family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000510
- InterPro:   IPR000318
- InterPro:   IPR005973 [H]

Pfam domain/function: PF00148 Oxidored_nitro [H]

EC number: NA

Molecular weight: Translated: 45850; Mature: 45718

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIHKFKPPMSGRMGVLWTLASIRDAALIEYGCMGHMQYGRMFLNQAGISRGCKLYSTHI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCC
DETDISLGDTRRLNRTIAQIVERDKPKIIFLLPSSVPTVIGTDLVAICEELQPEYPNTFL
CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEE
LPFGCGGFDIDGHRGVKEALLLLAKTLPKGIEKTGEPTFNIIGSCADLFRFHADAEEIIR
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHH
IMKGAFGMEKLCVMTSDTSVEQIENMGGAHINLVIRQEGEPAAKQLKERFGTPYLLARPY
HHHCCCCCHHEEEEECCCCHHHHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCEEEECCC
GIKGTLEWIDKIVKISGLTLDNSFIKSEKEKSMSQISPAISAFQHVIREHPDEARISLGG
CCCHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCC
HRDVVKGILSYAEEELSLIRGTCWCDSEAMASEEIPYFSETEWVQAISSEKKGLLMASGE
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCEEEECCC
ALKWAKGNIDLQISNPDIKWRLNPYESPFIGFRGAINLVNLWLNGLLEQIND
EEEEECCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GIHKFKPPMSGRMGVLWTLASIRDAALIEYGCMGHMQYGRMFLNQAGISRGCKLYSTHI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCC
DETDISLGDTRRLNRTIAQIVERDKPKIIFLLPSSVPTVIGTDLVAICEELQPEYPNTFL
CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEE
LPFGCGGFDIDGHRGVKEALLLLAKTLPKGIEKTGEPTFNIIGSCADLFRFHADAEEIIR
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHH
IMKGAFGMEKLCVMTSDTSVEQIENMGGAHINLVIRQEGEPAAKQLKERFGTPYLLARPY
HHHCCCCCHHEEEEECCCCHHHHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCEEEECCC
GIKGTLEWIDKIVKISGLTLDNSFIKSEKEKSMSQISPAISAFQHVIREHPDEARISLGG
CCCHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCC
HRDVVKGILSYAEEELSLIRGTCWCDSEAMASEEIPYFSETEWVQAISSEKKGLLMASGE
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCEEEECCC
ALKWAKGNIDLQISNPDIKWRLNPYESPFIGFRGAINLVNLWLNGLLEQIND
EEEEECCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]