Click here to switch to the map view.

The map label for this gene is ywjB [H]

Identifier: 153937613

GI number: 153937613

Start: 295434

End: 295958

Strand: Direct

Name: ywjB [H]

Synonym: CLC_0313

Alternate gene names: 153937613

Gene position: 295434-295958 (Clockwise)

Preceding gene: 153936620

Following gene: 153935123

Centisome position: 7.86

GC content: 27.24

Gene sequence:

>525_bases
ATGAAAAGAAAAATAATATTAAATTTAGCAATGAGCATAGATGGATATATAGCATCAAAAGATGGTGGATTTGATTGGAT
AGTTGGAGATGGAGATGAAAAATTAGATACTAAAGATAAATGGGATTATGATAAGTTTTTAAATGATGTGGATACTGTAG
TTATGGGAAAAAATTGTTATGACCAAAGCTTCCATAATGATTTTGCTGATAAAAAAGTATATGTAGCAACCTCACAAAAG
TTACAAAACTATGGCAATATACATTTTATAAATGGTGATATATGCAAAGTAATAGAAGAAGAAAAAGAAAAAAAGGGTAA
AGATATCTTCTTATTTGGCGGCGGAGGTCTTGCAGATAATTTTATTAAATCAAATATTATTGATGAGTATATAATTGGGA
TAATTCCTACAATATTAGGCAAAGGTAGACCTTTATTTCTAGAGAATAATCCTAAAATAGATTTACATCTAGATCAGTAT
ATTATGGATAAGGGTGTTGTAATATTAAGATATTCAAAAAGATAA

Upstream 100 bases:

>100_bases
CTTTTTATTAAAATGGGAAAAGATAGTCCATTTAAAACAAGAGATTTAATGTTTCCAGTATTATCTCATGCATAATAATA
AATGAAAAGGAATGATTATT

Downstream 100 bases:

>100_bases
ATATATATTCATAAAGGAATGGCTAGTTTATTAAGCAAGAATATAAATGTAGGAGAAGACAAATGAATTTTGTAGCTATA
GATTTTGAAACTGCTAATGA

Product: riboflavin biosynthesis protein RibD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKRKIILNLAMSIDGYIASKDGGFDWIVGDGDEKLDTKDKWDYDKFLNDVDTVVMGKNCYDQSFHNDFADKKVYVATSQK
LQNYGNIHFINGDICKVIEEEKEKKGKDIFLFGGGGLADNFIKSNIIDEYIIGIIPTILGKGRPLFLENNPKIDLHLDQY
IMDKGVVILRYSKR

Sequences:

>Translated_174_residues
MKRKIILNLAMSIDGYIASKDGGFDWIVGDGDEKLDTKDKWDYDKFLNDVDTVVMGKNCYDQSFHNDFADKKVYVATSQK
LQNYGNIHFINGDICKVIEEEKEKKGKDIFLFGGGGLADNFIKSNIIDEYIIGIIPTILGKGRPLFLENNPKIDLHLDQY
IMDKGVVILRYSKR
>Mature_174_residues
MKRKIILNLAMSIDGYIASKDGGFDWIVGDGDEKLDTKDKWDYDKFLNDVDTVVMGKNCYDQSFHNDFADKKVYVATSQK
LQNYGNIHFINGDICKVIEEEKEKKGKDIFLFGGGGLADNFIKSNIIDEYIIGIIPTILGKGRPLFLENNPKIDLHLDQY
IMDKGVVILRYSKR

Specific function: Unknown

COG id: COG0262

COG function: function code H; Dihydrofolate reductase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yyaP [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002734 [H]

Pfam domain/function: PF01872 RibD_C [H]

EC number: NA

Molecular weight: Translated: 19851; Mature: 19851

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKIILNLAMSIDGYIASKDGGFDWIVGDGDEKLDTKDKWDYDKFLNDVDTVVMGKNCY
CCCEEEEEEEECCCCEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHEEECCCCC
DQSFHNDFADKKVYVATSQKLQNYGNIHFINGDICKVIEEEKEKKGKDIFLFGGGGLADN
CHHHHCCCCCCEEEEEEHHHHHHCCCEEEECCHHHHHHHHHHHCCCCEEEEEECCCCHHH
FIKSNIIDEYIIGIIPTILGKGRPLFLENNPKIDLHLDQYIMDKGVVILRYSKR
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEHHHHHCCCEEEEEECCC
>Mature Secondary Structure
MKRKIILNLAMSIDGYIASKDGGFDWIVGDGDEKLDTKDKWDYDKFLNDVDTVVMGKNCY
CCCEEEEEEEECCCCEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHEEECCCCC
DQSFHNDFADKKVYVATSQKLQNYGNIHFINGDICKVIEEEKEKKGKDIFLFGGGGLADN
CHHHHCCCCCCEEEEEEHHHHHHCCCEEEECCHHHHHHHHHHHCCCCEEEEEECCCCHHH
FIKSNIIDEYIIGIIPTILGKGRPLFLENNPKIDLHLDQYIMDKGVVILRYSKR
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEHHHHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]