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The map label for this gene is 153937493

Identifier: 153937493

GI number: 153937493

Start: 2063203

End: 2064072

Strand: Reverse

Name: 153937493

Synonym: CLC_1943

Alternate gene names: NA

Gene position: 2064072-2063203 (Counterclockwise)

Preceding gene: 153937717

Following gene: 153935700

Centisome position: 54.89

GC content: 28.85

Gene sequence:

>870_bases
ATGAGATATGAAGGCGATATATATAGACCACCTAGTGAGGCCAATAGTTTAATTTTACAAATTACTATAGGTTGTTCTCA
TAATAAATGTAGTTTTTGTTCTATGTATAAAAATGAGAAATTTAGAGTAAGAGAATTAAAAGAGATATTTGAAGATCTAG
AGGAAAGTAAATCATATTATAGAAGAATAAATAGAATATTTTTGGCAGATGGAGATGCACTTTGCCTAAAAACGGAAACT
TTAAAAAAGATACTATTAAAAATAAAGGAAACTCATCCTCAATGTGAAAGAGTTGGTATATATGCTACAGCTAAGGATGT
ATTAAAAAAATCTATAGAAGAATTAAAAAAGCTTAGGGAATTAGGCCTAGGAATAGTTTATATGGGATTAGAAAGTGGTA
GTCCAGAAATTTTAGAGGACATAAATAAGGGAGTTAAAGTTGAAGAATATATAGAAGCCTCTAAAAAAGCAAGGGCCAGT
GGTATAAAATCATCTATAACTGTAATATCTGGCCTTGGAGGAAAAGAAAAATGGAAACAGCATGCTATAGAAACAGGCAA
AGCATTATCTTTAATAGATCCAGATTATGTTGGCTTATTAACTCTTCTTTTAGATGAGGGTACAGAAATGACTGAACAGG
TGAAAAGAGGAGAAATTACTTTGTTAAAACCAGAAGAGGTCATGGAAGAAACAAAATTAATGCTAGAAAATATGAATGTA
ACTAATTGTATATTCAGAAGTAATCATGCCTCTAATTATGTAGCATTAAGAGGTACTCTACCTAGAGATAAAGAAAAATT
AATAAATATAATAGGGAATATATTAAAAAGAGATTTTTATTATAAAGAGGATATATATAGATTATTATAG

Upstream 100 bases:

>100_bases
ACTAGAAAACTTAGAAAAGGTAAAGTTTTTAGTATAGAACAAAAGATAAAAATTTTAATGAATAGATGAGAGTATTTTTA
ACGGAGGTATTGAAAAGTTT

Downstream 100 bases:

>100_bases
GATTAATTTAAATAAACTATATTAGAAATATTAAAAATTTAAAATAGATATTAAGGGTATATTAATAAAAATATTGATAA
AGTATGAATTCAAACAGCAA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; Oxygen-Independent Coproporphyrinogen III Oxidase; Radical SAM Family Protein; Radical Sam Domain Protein; Coproporphyrinogen Oxidase; Elongator /MiaB/NifB; Fe-S Oxidoreductase Family Protein; Radical SAM Superfamily Lipoprotein; Oxygen-Independent Coproporphyrinogen III; Radical SAM

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MRYEGDIYRPPSEANSLILQITIGCSHNKCSFCSMYKNEKFRVRELKEIFEDLEESKSYYRRINRIFLADGDALCLKTET
LKKILLKIKETHPQCERVGIYATAKDVLKKSIEELKKLRELGLGIVYMGLESGSPEILEDINKGVKVEEYIEASKKARAS
GIKSSITVISGLGGKEKWKQHAIETGKALSLIDPDYVGLLTLLLDEGTEMTEQVKRGEITLLKPEEVMEETKLMLENMNV
TNCIFRSNHASNYVALRGTLPRDKEKLINIIGNILKRDFYYKEDIYRLL

Sequences:

>Translated_289_residues
MRYEGDIYRPPSEANSLILQITIGCSHNKCSFCSMYKNEKFRVRELKEIFEDLEESKSYYRRINRIFLADGDALCLKTET
LKKILLKIKETHPQCERVGIYATAKDVLKKSIEELKKLRELGLGIVYMGLESGSPEILEDINKGVKVEEYIEASKKARAS
GIKSSITVISGLGGKEKWKQHAIETGKALSLIDPDYVGLLTLLLDEGTEMTEQVKRGEITLLKPEEVMEETKLMLENMNV
TNCIFRSNHASNYVALRGTLPRDKEKLINIIGNILKRDFYYKEDIYRLL
>Mature_289_residues
MRYEGDIYRPPSEANSLILQITIGCSHNKCSFCSMYKNEKFRVRELKEIFEDLEESKSYYRRINRIFLADGDALCLKTET
LKKILLKIKETHPQCERVGIYATAKDVLKKSIEELKKLRELGLGIVYMGLESGSPEILEDINKGVKVEEYIEASKKARAS
GIKSSITVISGLGGKEKWKQHAIETGKALSLIDPDYVGLLTLLLDEGTEMTEQVKRGEITLLKPEEVMEETKLMLENMNV
TNCIFRSNHASNYVALRGTLPRDKEKLINIIGNILKRDFYYKEDIYRLL

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33096; Mature: 33096

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYEGDIYRPPSEANSLILQITIGCSHNKCSFCSMYKNEKFRVRELKEIFEDLEESKSYY
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RRINRIFLADGDALCLKTETLKKILLKIKETHPQCERVGIYATAKDVLKKSIEELKKLRE
HHHHEEEEECCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLGIVYMGLESGSPEILEDINKGVKVEEYIEASKKARASGIKSSITVISGLGGKEKWKQ
CCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHH
HAIETGKALSLIDPDYVGLLTLLLDEGTEMTEQVKRGEITLLKPEEVMEETKLMLENMNV
HHHHCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCH
TNCIFRSNHASNYVALRGTLPRDKEKLINIIGNILKRDFYYKEDIYRLL
HHHHEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRYEGDIYRPPSEANSLILQITIGCSHNKCSFCSMYKNEKFRVRELKEIFEDLEESKSYY
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RRINRIFLADGDALCLKTETLKKILLKIKETHPQCERVGIYATAKDVLKKSIEELKKLRE
HHHHEEEEECCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLGIVYMGLESGSPEILEDINKGVKVEEYIEASKKARASGIKSSITVISGLGGKEKWKQ
CCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHH
HAIETGKALSLIDPDYVGLLTLLLDEGTEMTEQVKRGEITLLKPEEVMEETKLMLENMNV
HHHHCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCH
TNCIFRSNHASNYVALRGTLPRDKEKLINIIGNILKRDFYYKEDIYRLL
HHHHEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA