Click here to switch to the map view.

The map label for this gene is 153937229

Identifier: 153937229

GI number: 153937229

Start: 906187

End: 906435

Strand: Direct

Name: 153937229

Synonym: CLC_0880

Alternate gene names: NA

Gene position: 906187-906435 (Clockwise)

Preceding gene: 153934705

Following gene: 153935459

Centisome position: 24.1

GC content: 31.33

Gene sequence:

>249_bases
ATGCAAGATAAAGATATGATAAATGATACGCTATCAGCGTTAAAAGCTAGTTTAACAGGATATTCTACTGTAATTTCTGA
GACAGATAATCAACAATTAAGACAAGAAATTCAACAAATGAGAAATAGTTGTGAAACAAGTCAATATGATTTTTATACTG
TAGCAAAACAAAAAGGTTTCTACAAGCCAGCAGCACAAGCTTCACAACAGCAAATTCAAACAGTAAAAAGCCAAGTAAGT
GGTTCATAA

Upstream 100 bases:

>100_bases
ATCAACAAATAAAACAAATGTTCCAAAAATCAGCACAGGATGCTCATAATACAAAACAAAAATTAATGACTTTTTTAGGA
TAGTTTAAGGAGGTATAATT

Downstream 100 bases:

>100_bases
AATATAGTTAAAGTCAATAAGGAAAATAAATGATCATAAAATGTAGTTAAAGTCAATAAGAAAAATAAGTAAATCATAAA
ATTTAGTTAAAGCTAATAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Spore Coat Protein F; Coat F Domain-Containing Protein; Spore Coat Protein F-Related Protein

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MQDKDMINDTLSALKASLTGYSTVISETDNQQLRQEIQQMRNSCETSQYDFYTVAKQKGFYKPAAQASQQQIQTVKSQVS
GS

Sequences:

>Translated_82_residues
MQDKDMINDTLSALKASLTGYSTVISETDNQQLRQEIQQMRNSCETSQYDFYTVAKQKGFYKPAAQASQQQIQTVKSQVS
GS
>Mature_82_residues
MQDKDMINDTLSALKASLTGYSTVISETDNQQLRQEIQQMRNSCETSQYDFYTVAKQKGFYKPAAQASQQQIQTVKSQVS
GS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9217; Mature: 9217

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDKDMINDTLSALKASLTGYSTVISETDNQQLRQEIQQMRNSCETSQYDFYTVAKQKGF
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
YKPAAQASQQQIQTVKSQVSGS
CCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQDKDMINDTLSALKASLTGYSTVISETDNQQLRQEIQQMRNSCETSQYDFYTVAKQKGF
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
YKPAAQASQQQIQTVKSQVSGS
CCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA