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The map label for this gene is ydiB [H]

Identifier: 153937225

GI number: 153937225

Start: 3412586

End: 3413044

Strand: Direct

Name: ydiB [H]

Synonym: CLC_3265

Alternate gene names: 153937225

Gene position: 3412586-3413044 (Clockwise)

Preceding gene: 153935404

Following gene: 153934756

Centisome position: 90.75

GC content: 26.8

Gene sequence:

>459_bases
ATGGAATTTATAGTTGACTCTATAAATAAAACTATTGATATAGGTAATTTTATAGGGCGCCATTGTAATTCAGGTGATAT
TTTATGTCTAAATGGAGACTTAGGTGCAGGTAAAACTCACTTATCTAAAGGAATAGCTAAAGGATTAAATATTAAAGATA
ATATAACTAGTCCAACTTTCAATATAGTAAATGAATACGATGGAAGATTAAAATTATATCATTTTGATGTTTATAGAGTA
AACGATCCAGATGAAATAGAAGCTATTGGATTTGATGAGTACATATTTGGAGAAGGTATAAGCATTATTGAATGGTCTGA
TTATATAGAAGACCTTATTCCAAATGAACACATAGATATAAGAATAAATAAAATACCTGAAAAGGGAGAAAGCTATAGAA
AAATAACAATAAATTACTATGGCAATAGATATGATTATATAAAGGAGCTAAAAATATGA

Upstream 100 bases:

>100_bases
GAGGTAGGATAAATTAAGATATGAACTATATAAAAATTTAGTGGTTATAATATTTTACTTTTCTATTAAATATTATAGCT
ACATTATTCGAGGTGATTAT

Downstream 100 bases:

>100_bases
AAATACTAAGTATAGATTCTGCTACAGAATGTGCTAGTTGTTCTGTATTAGATGAGGATAAATTATATGGTGAAATAAAT
TTTAACTATAAAAAACAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MEFIVDSINKTIDIGNFIGRHCNSGDILCLNGDLGAGKTHLSKGIAKGLNIKDNITSPTFNIVNEYDGRLKLYHFDVYRV
NDPDEIEAIGFDEYIFGEGISIIEWSDYIEDLIPNEHIDIRINKIPEKGESYRKITINYYGNRYDYIKELKI

Sequences:

>Translated_152_residues
MEFIVDSINKTIDIGNFIGRHCNSGDILCLNGDLGAGKTHLSKGIAKGLNIKDNITSPTFNIVNEYDGRLKLYHFDVYRV
NDPDEIEAIGFDEYIFGEGISIIEWSDYIEDLIPNEHIDIRINKIPEKGESYRKITINYYGNRYDYIKELKI
>Mature_152_residues
MEFIVDSINKTIDIGNFIGRHCNSGDILCLNGDLGAGKTHLSKGIAKGLNIKDNITSPTFNIVNEYDGRLKLYHFDVYRV
NDPDEIEAIGFDEYIFGEGISIIEWSDYIEDLIPNEHIDIRINKIPEKGESYRKITINYYGNRYDYIKELKI

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=116, Percent_Identity=35.3448275862069, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 17469; Mature: 17469

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFIVDSINKTIDIGNFIGRHCNSGDILCLNGDLGAGKTHLSKGIAKGLNIKDNITSPTF
CCCCHHCCCCEEECCHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCEE
NIVNEYDGRLKLYHFDVYRVNDPDEIEAIGFDEYIFGEGISIIEWSDYIEDLIPNEHIDI
EEEECCCCEEEEEEEEEEECCCCCCEEEECCCCEECCCCCEEEEHHHHHHHHCCCCEEEE
RINKIPEKGESYRKITINYYGNRYDYIKELKI
EEECCCCCCCCEEEEEEEEECCEEEEHEECCC
>Mature Secondary Structure
MEFIVDSINKTIDIGNFIGRHCNSGDILCLNGDLGAGKTHLSKGIAKGLNIKDNITSPTF
CCCCHHCCCCEEECCHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCEE
NIVNEYDGRLKLYHFDVYRVNDPDEIEAIGFDEYIFGEGISIIEWSDYIEDLIPNEHIDI
EEEECCCCEEEEEEEEEEECCCCCCEEEECCCCEECCCCCEEEEHHHHHHHHCCCCEEEE
RINKIPEKGESYRKITINYYGNRYDYIKELKI
EEECCCCCCCCEEEEEEEEECCEEEEHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]