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The map label for this gene is 153937147

Identifier: 153937147

GI number: 153937147

Start: 293970

End: 294347

Strand: Direct

Name: 153937147

Synonym: CLC_0311

Alternate gene names: NA

Gene position: 293970-294347 (Clockwise)

Preceding gene: 153934512

Following gene: 153936620

Centisome position: 7.82

GC content: 32.54

Gene sequence:

>378_bases
ATGAAATTTGATGAATTATATGATATTGCAAAAAATGCATTAAATCCTAGAAAAATTTCTAAAAACTCTTATGCTGGCTC
TGTTGCAGCAGCTATTTTGAGTGAAAGTGGAAAAGTTTATACTGGAGTATGTATAGATACACCTTGTTCTATGGGATTCT
GTGCAGAACATGCGGCTATTGCAGCTATGATTACTGCTGGAGAAAATAGAATAACAAAAGTAGTTGCAGTTTATGAAGAT
GGTACAATCATTCCACCATGTGGAAGATGTAGAGAATTTATTTGCCAAATCCATGATGAAAACTACAAATGTCAAGTAAT
GATTAAAAAGGATATGATAATTACTATCAATGACTTGTTACCATATCGATGGGAATAG

Upstream 100 bases:

>100_bases
AGATTAGGATTTGGATATGTTGGAATTATTAAAGATGGATTATATGTTGGTAATAAGCGTGAAAAAATAATATAAAAATT
TATTTAAAAGGAGAGTAACT

Downstream 100 bases:

>100_bases
ACTTAATTCGTAATTTTAGACAAACAAAAACCGTATAAAAAAGAGATAAGTAGTTATGAGAAAGCTTATTATTAACACAT
ATTTATTTAGTAAAAGTTAT

Product: cytidine/deoxycytidylate deaminase family protein

Products: NA

Alternate protein names: Cytidine/Deoxycytidylate Deaminase Family Protein; Cytidine/Deoxycytidylate Deaminase; CMP/DCMP Deaminase

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKFDELYDIAKNALNPRKISKNSYAGSVAAAILSESGKVYTGVCIDTPCSMGFCAEHAAIAAMITAGENRITKVVAVYED
GTIIPPCGRCREFICQIHDENYKCQVMIKKDMIITINDLLPYRWE

Sequences:

>Translated_125_residues
MKFDELYDIAKNALNPRKISKNSYAGSVAAAILSESGKVYTGVCIDTPCSMGFCAEHAAIAAMITAGENRITKVVAVYED
GTIIPPCGRCREFICQIHDENYKCQVMIKKDMIITINDLLPYRWE
>Mature_125_residues
MKFDELYDIAKNALNPRKISKNSYAGSVAAAILSESGKVYTGVCIDTPCSMGFCAEHAAIAAMITAGENRITKVVAVYED
GTIIPPCGRCREFICQIHDENYKCQVMIKKDMIITINDLLPYRWE

Specific function: Unknown

COG id: COG0295

COG function: function code F; Cytidine deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13886; Mature: 13886

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFDELYDIAKNALNPRKISKNSYAGSVAAAILSESGKVYTGVCIDTPCSMGFCAEHAAI
CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHE
AAMITAGENRITKVVAVYEDGTIIPPCGRCREFICQIHDENYKCQVMIKKDMIITINDLL
EEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEEECCC
PYRWE
CCCCC
>Mature Secondary Structure
MKFDELYDIAKNALNPRKISKNSYAGSVAAAILSESGKVYTGVCIDTPCSMGFCAEHAAI
CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHE
AAMITAGENRITKVVAVYEDGTIIPPCGRCREFICQIHDENYKCQVMIKKDMIITINDLL
EEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEEECCC
PYRWE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA