BacMap

Definition	Clostridium botulinum A str. Hall, complete genome.
Accession	NC_009698
Length	3,760,560

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The map label for this gene is vat [H]

Identifier: 153937120

GI number: 153937120

Start: 1076374

End: 1078047

Strand: Direct

Name: vat [H]

Synonym: CLC_1056

Alternate gene names: 153937120

Gene position: 1076374-1078047 (Clockwise)

Preceding gene: 153936061

Following gene: 153935266

Centisome position: 28.62

GC content: 32.8

Gene sequence:

>1674_bases
ATGAGTATAGAAAATAGCAATAACACAGAAAGAACAAAAAAATACTTGGGAAATATGTTTAAAGCGAGATTTCCCTATGT
TTATATATCTACATGGGAAGAGGAAAGAGCTATATCAGTTATAAGCTCGGTTGCAAAGGATGCTTCACTTATAAAGACGC
CTAGAACAACTTATATATGGAGTCAAACAAATGGAATGGCTTTAGAAAACCTTAAAGGAAAAGAAGAAACTAAACAACCA
TTAAAGGCACTGGAATTTATAGAAAAATGTGAAGAGCCAGCAGTTTTTATTTTAAAGGATTTTCATGTGTTTTTTGGAGT
GCAAGGAAAAAATATAGACTATAATCTAATAAGAAAAGTTAGAGATTTGGTAACAGTACTTAAGGCAAGCCCTAATCCTA
AAAGTGTAGTATTTATTTCACCTACAGTAATATTACCTAATGAACTTCAAAAAGATGTTACTATTTTAGATTTTGATTTG
CCAACCATAGATGAAATTAAGGGTATGCTGGATGAAATGATTTATGTAAATGAGCAAAGTGGAAGAATTGAGATGGATCT
TAATGAATCAGAAAAGGAAAAAATTTGTAAAGCTGCATTGGGACTTACTCTCCAGGAAGCGGAAAATGCCTTTGCAAGAG
CCATGGTTGAGGATGGAAAGCTTAATATTGATGATATTGAAGTGGTTTTAGAAGAAAAATGTCAAGTAATTAAGAAGACA
GGAATACTTGAATTTATGAAAAGTGACTTAAAAATGGAGGATGTAGGAGGACTTGAAAATCTAAAAAGATGGATTTCAAA
GAGGAACAAGTCTTGGCTTGATTCTGCTCAAAAATATAATTTACCTGCACCTAAAGGAGTATTAATAACAGGGGTGCCAG
GCTGTGGTAAGAGTTTAACAGCAAAAGCTATAAGTGCAATGTGGCAACTGCCACTTTTAAGATTGGACATGGGGAAAATA
TTTAGTGGTGTTGTAGGAAGTTCTGAAGAAAATATGAGAAAAGCAATAAAAACAGCGGAAGCAGTATCTCCATCTATACT
TTGGATAGATGAAATAGAAAAAGGATTTGGTGGGGCTAGTTCCTCAGGAGATAGCGGAACTTCTATGAGAATTTTTGGAA
CATTTCTTACATGGATGCAAGAAAAGATTAAACCTGTATTTGTTGTTGCAACAGCTAATAATATAAGTAATCTTCCTTCA
GAACTCTTAAGAAAAGGAAGATTTGACGAGATATTTTTTGTAGACTTGCCTACAAAAAATGAAAGAAAGGATATATTTAG
ACTACATTTGAAAAAAAGACTTACTAATGAAGAAGTTTGTGAAGAAATTAGTGTTACCGATGAATTATTATCTAATCTTG
CAGATATAACAGAAGGATTTGTAGGAGCAGAAATAGAGCAAGCTGTAATAGCTGCACTTTTTGAGGCATTTTCAGAAGAT
AGAGCTTTAAAAGTAACTGATTTGGAAAGAGTAATAAAAAATACAGTTCCACTTTCAGTAACACAAAGAGAGCAAATTAT
AAAGATTAGAGAATGGGCAAATGTAAGAGCAGTTGCCGCTACAGCAAAAGAGGATAGAAGCGAGTATTTAGAAGTAAATG
AAGAAAAAAAAGATGAAAAAAAGGGAGAAGATGACATAAGAATATCTAGAGGTGGTAGAACTATAGATTTTTAA

Upstream 100 bases:

>100_bases
GAAGTTAGATTACATAAAGATGGAGCAATTTTTCTAAATGGTATGGGTGATTTCAATAGTATAAAAAGTAAGCTTAAAAA
TTTGTAGGATGGTGAATAAA

Downstream 100 bases:

>100_bases
AGGAGGTATAAGCTATGTCTATATCATTAGCATTAGTTCCTGCAGTTTTAACTCTTAAAGTTGTTATGAATGTAAAAGAC
CTTGATAATTGGGTAGAAAA

Product: AAA family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MSIENSNNTERTKKYLGNMFKARFPYVYISTWEEERAISVISSVAKDASLIKTPRTTYIWSQTNGMALENLKGKEETKQP
LKALEFIEKCEEPAVFILKDFHVFFGVQGKNIDYNLIRKVRDLVTVLKASPNPKSVVFISPTVILPNELQKDVTILDFDL
PTIDEIKGMLDEMIYVNEQSGRIEMDLNESEKEKICKAALGLTLQEAENAFARAMVEDGKLNIDDIEVVLEEKCQVIKKT
GILEFMKSDLKMEDVGGLENLKRWISKRNKSWLDSAQKYNLPAPKGVLITGVPGCGKSLTAKAISAMWQLPLLRLDMGKI
FSGVVGSSEENMRKAIKTAEAVSPSILWIDEIEKGFGGASSSGDSGTSMRIFGTFLTWMQEKIKPVFVVATANNISNLPS
ELLRKGRFDEIFFVDLPTKNERKDIFRLHLKKRLTNEEVCEEISVTDELLSNLADITEGFVGAEIEQAVIAALFEAFSED
RALKVTDLERVIKNTVPLSVTQREQIIKIREWANVRAVAATAKEDRSEYLEVNEEKKDEKKGEDDIRISRGGRTIDF

Sequences:

>Translated_557_residues
MSIENSNNTERTKKYLGNMFKARFPYVYISTWEEERAISVISSVAKDASLIKTPRTTYIWSQTNGMALENLKGKEETKQP
LKALEFIEKCEEPAVFILKDFHVFFGVQGKNIDYNLIRKVRDLVTVLKASPNPKSVVFISPTVILPNELQKDVTILDFDL
PTIDEIKGMLDEMIYVNEQSGRIEMDLNESEKEKICKAALGLTLQEAENAFARAMVEDGKLNIDDIEVVLEEKCQVIKKT
GILEFMKSDLKMEDVGGLENLKRWISKRNKSWLDSAQKYNLPAPKGVLITGVPGCGKSLTAKAISAMWQLPLLRLDMGKI
FSGVVGSSEENMRKAIKTAEAVSPSILWIDEIEKGFGGASSSGDSGTSMRIFGTFLTWMQEKIKPVFVVATANNISNLPS
ELLRKGRFDEIFFVDLPTKNERKDIFRLHLKKRLTNEEVCEEISVTDELLSNLADITEGFVGAEIEQAVIAALFEAFSED
RALKVTDLERVIKNTVPLSVTQREQIIKIREWANVRAVAATAKEDRSEYLEVNEEKKDEKKGEDDIRISRGGRTIDF
>Mature_556_residues
SIENSNNTERTKKYLGNMFKARFPYVYISTWEEERAISVISSVAKDASLIKTPRTTYIWSQTNGMALENLKGKEETKQPL
KALEFIEKCEEPAVFILKDFHVFFGVQGKNIDYNLIRKVRDLVTVLKASPNPKSVVFISPTVILPNELQKDVTILDFDLP
TIDEIKGMLDEMIYVNEQSGRIEMDLNESEKEKICKAALGLTLQEAENAFARAMVEDGKLNIDDIEVVLEEKCQVIKKTG
ILEFMKSDLKMEDVGGLENLKRWISKRNKSWLDSAQKYNLPAPKGVLITGVPGCGKSLTAKAISAMWQLPLLRLDMGKIF
SGVVGSSEENMRKAIKTAEAVSPSILWIDEIEKGFGGASSSGDSGTSMRIFGTFLTWMQEKIKPVFVVATANNISNLPSE
LLRKGRFDEIFFVDLPTKNERKDIFRLHLKKRLTNEEVCEEISVTDELLSNLADITEGFVGAEIEQAVIAALFEAFSEDR
ALKVTDLERVIKNTVPLSVTQREQIIKIREWANVRAVAATAKEDRSEYLEVNEEKKDEKKGEDDIRISRGGRTIDF

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI157671927, Length=241, Percent_Identity=32.3651452282158, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI45643123, Length=252, Percent_Identity=31.3492063492063, Blast_Score=109, Evalue=9e-24,
Organism=Homo sapiens, GI45643125, Length=252, Percent_Identity=31.3492063492063, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI4507173, Length=266, Percent_Identity=30.8270676691729, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI6005942, Length=222, Percent_Identity=29.2792792792793, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI300192933, Length=260, Percent_Identity=31.1538461538462, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI24430151, Length=242, Percent_Identity=28.5123966942149, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI153792536, Length=247, Percent_Identity=26.3157894736842, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI24497618, Length=253, Percent_Identity=27.2727272727273, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI229577436, Length=255, Percent_Identity=27.0588235294118, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI24497435, Length=204, Percent_Identity=28.921568627451, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI4505725, Length=242, Percent_Identity=25.6198347107438, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI195539395, Length=215, Percent_Identity=26.9767441860465, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI7657689, Length=234, Percent_Identity=28.2051282051282, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI21327685, Length=234, Percent_Identity=28.2051282051282, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI21361144, Length=227, Percent_Identity=26.431718061674, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI5729991, Length=202, Percent_Identity=27.7227722772277, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI24430155, Length=202, Percent_Identity=27.7227722772277, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI89064750, Length=202, Percent_Identity=27.7227722772277, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI194018488, Length=166, Percent_Identity=33.7349397590361, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI7019569, Length=194, Percent_Identity=29.8969072164948, Blast_Score=73, Evalue=8e-13,
Organism=Homo sapiens, GI31377644, Length=230, Percent_Identity=29.5652173913043, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI156564401, Length=261, Percent_Identity=26.4367816091954, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI226371754, Length=220, Percent_Identity=29.0909090909091, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI4506209, Length=270, Percent_Identity=24.0740740740741, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI5901990, Length=191, Percent_Identity=27.7486910994764, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI17865802, Length=194, Percent_Identity=29.3814432989691, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI310125280, Length=216, Percent_Identity=27.7777777777778, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI310125282, Length=216, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=7e-11,
Organism=Escherichia coli, GI1789568, Length=285, Percent_Identity=27.3684210526316, Blast_Score=89, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17508053, Length=250, Percent_Identity=30.4, Blast_Score=108, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17532375, Length=223, Percent_Identity=32.2869955156951, Blast_Score=105, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI25153574, Length=301, Percent_Identity=28.5714285714286, Blast_Score=102, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17531535, Length=220, Percent_Identity=30, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI193209502, Length=229, Percent_Identity=28.3842794759825, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17537217, Length=184, Percent_Identity=30.9782608695652, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI115534323, Length=204, Percent_Identity=33.8235294117647, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17554264, Length=220, Percent_Identity=30.4545454545455, Blast_Score=89, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17562804, Length=170, Percent_Identity=32.3529411764706, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71994521, Length=238, Percent_Identity=33.1932773109244, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17563250, Length=243, Percent_Identity=29.2181069958848, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI193206114, Length=196, Percent_Identity=30.6122448979592, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI193206116, Length=196, Percent_Identity=30.6122448979592, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI133931034, Length=196, Percent_Identity=30.6122448979592, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17554784, Length=261, Percent_Identity=28.735632183908, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17508701, Length=202, Percent_Identity=27.7227722772277, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17554786, Length=206, Percent_Identity=28.6407766990291, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI25144278, Length=244, Percent_Identity=25.8196721311475, Blast_Score=76, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI25144281, Length=244, Percent_Identity=25.8196721311475, Blast_Score=76, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI71987372, Length=242, Percent_Identity=24.7933884297521, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71987364, Length=242, Percent_Identity=24.7933884297521, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI86561515, Length=243, Percent_Identity=27.5720164609054, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI32563584, Length=254, Percent_Identity=30.3149606299213, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17508421, Length=189, Percent_Identity=32.8042328042328, Blast_Score=71, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17505546, Length=253, Percent_Identity=24.1106719367589, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17563248, Length=270, Percent_Identity=23.7037037037037, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17541226, Length=227, Percent_Identity=23.7885462555066, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17541224, Length=227, Percent_Identity=23.7885462555066, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI25146157, Length=315, Percent_Identity=26.6666666666667, Blast_Score=65, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6323429, Length=235, Percent_Identity=33.6170212765957, Blast_Score=109, Evalue=9e-25,
Organism=Saccharomyces cerevisiae, GI6322994, Length=200, Percent_Identity=32, Blast_Score=100, Evalue=9e-22,
Organism=Saccharomyces cerevisiae, GI6320077, Length=222, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6320854, Length=225, Percent_Identity=30.2222222222222, Blast_Score=95, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6322651, Length=257, Percent_Identity=27.6264591439689, Blast_Score=94, Evalue=5e-20,
Organism=Saccharomyces cerevisiae, GI6323736, Length=257, Percent_Identity=31.1284046692607, Blast_Score=92, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6319554, Length=245, Percent_Identity=32.2448979591837, Blast_Score=89, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6321709, Length=280, Percent_Identity=26.7857142857143, Blast_Score=86, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6320197, Length=300, Percent_Identity=29.3333333333333, Blast_Score=84, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6324833, Length=244, Percent_Identity=27.4590163934426, Blast_Score=83, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6324000, Length=233, Percent_Identity=27.8969957081545, Blast_Score=81, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6325281, Length=247, Percent_Identity=26.7206477732794, Blast_Score=80, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6324691, Length=227, Percent_Identity=26.431718061674, Blast_Score=78, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6321465, Length=237, Percent_Identity=27.0042194092827, Blast_Score=77, Evalue=6e-15,
Organism=Saccharomyces cerevisiae, GI6320602, Length=190, Percent_Identity=30.5263157894737, Blast_Score=76, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6321390, Length=204, Percent_Identity=25.9803921568627, Blast_Score=73, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6325431, Length=234, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322704, Length=269, Percent_Identity=26.7657992565056, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI19921202, Length=334, Percent_Identity=28.7425149700599, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24639391, Length=254, Percent_Identity=31.8897637795276, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI281365776, Length=191, Percent_Identity=31.9371727748691, Blast_Score=102, Evalue=7e-22,
Organism=Drosophila melanogaster, GI24660075, Length=191, Percent_Identity=31.9371727748691, Blast_Score=102, Evalue=7e-22,
Organism=Drosophila melanogaster, GI45552965, Length=191, Percent_Identity=31.9371727748691, Blast_Score=102, Evalue=1e-21,
Organism=Drosophila melanogaster, GI161076486, Length=223, Percent_Identity=30.4932735426009, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI17137560, Length=223, Percent_Identity=30.4932735426009, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI161076488, Length=223, Percent_Identity=30.4932735426009, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24656825, Length=249, Percent_Identity=27.710843373494, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24656820, Length=249, Percent_Identity=27.710843373494, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24652279, Length=187, Percent_Identity=32.0855614973262, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24665814, Length=238, Percent_Identity=31.9327731092437, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI28574878, Length=238, Percent_Identity=31.9327731092437, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI281363136, Length=169, Percent_Identity=33.1360946745562, Blast_Score=88, Evalue=2e-17,
Organism=Drosophila melanogaster, GI78707192, Length=169, Percent_Identity=33.1360946745562, Blast_Score=88, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24658770, Length=233, Percent_Identity=30.9012875536481, Blast_Score=87, Evalue=4e-17,
Organism=Drosophila melanogaster, GI281361487, Length=269, Percent_Identity=27.8810408921933, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24649446, Length=242, Percent_Identity=28.5123966942149, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI20129423, Length=188, Percent_Identity=28.7234042553192, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI20129529, Length=263, Percent_Identity=26.615969581749, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI19920408, Length=204, Percent_Identity=27.9411764705882, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI18860063, Length=261, Percent_Identity=26.4367816091954, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24651451, Length=204, Percent_Identity=28.921568627451, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21355121, Length=284, Percent_Identity=25.7042253521127, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24581396, Length=188, Percent_Identity=28.7234042553192, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24663015, Length=202, Percent_Identity=28.2178217821782, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI17738151, Length=228, Percent_Identity=25, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24640100, Length=202, Percent_Identity=26.7326732673267, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17137738, Length=270, Percent_Identity=24.0740740740741, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI18859657, Length=194, Percent_Identity=30.4123711340206, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24639486, Length=196, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI17864540, Length=202, Percent_Identity=28.7128712871287, Blast_Score=66, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24644145, Length=188, Percent_Identity=27.6595744680851, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI28573010, Length=223, Percent_Identity=27.8026905829596, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 62789; Mature: 62658

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIENSNNTERTKKYLGNMFKARFPYVYISTWEEERAISVISSVAKDASLIKTPRTTYIW
CCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEE
SQTNGMALENLKGKEETKQPLKALEFIEKCEEPAVFILKDFHVFFGVQGKNIDYNLIRKV
ECCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHEECCCCCCCHHHHHHH
RDLVTVLKASPNPKSVVFISPTVILPNELQKDVTILDFDLPTIDEIKGMLDEMIYVNEQS
HHHHHHHHCCCCCCEEEEEECCEECCHHHCCCCEEEECCCCCHHHHHHHHHHHEEEECCC
GRIEMDLNESEKEKICKAALGLTLQEAENAFARAMVEDGKLNIDDIEVVLEEKCQVIKKT
CEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
GILEFMKSDLKMEDVGGLENLKRWISKRNKSWLDSAQKYNLPAPKGVLITGVPGCGKSLT
HHHHHHHHCCCCHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHH
AKAISAMWQLPLLRLDMGKIFSGVVGSSEENMRKAIKTAEAVSPSILWIDEIEKGFGGAS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCC
SSGDSGTSMRIFGTFLTWMQEKIKPVFVVATANNISNLPSELLRKGRFDEIFFVDLPTKN
CCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHHCCHHHHHHCCCCCEEEEEECCCCC
ERKDIFRLHLKKRLTNEEVCEEISVTDELLSNLADITEGFVGAEIEQAVIAALFEAFSED
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
RALKVTDLERVIKNTVPLSVTQREQIIKIREWANVRAVAATAKEDRSEYLEVNEEKKDEK
CCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
KGEDDIRISRGGRTIDF
CCCCCEEEECCCCCCCC
>Mature Secondary Structure 
SIENSNNTERTKKYLGNMFKARFPYVYISTWEEERAISVISSVAKDASLIKTPRTTYIW
CCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEE
SQTNGMALENLKGKEETKQPLKALEFIEKCEEPAVFILKDFHVFFGVQGKNIDYNLIRKV
ECCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHEECCCCCCCHHHHHHH
RDLVTVLKASPNPKSVVFISPTVILPNELQKDVTILDFDLPTIDEIKGMLDEMIYVNEQS
HHHHHHHHCCCCCCEEEEEECCEECCHHHCCCCEEEECCCCCHHHHHHHHHHHEEEECCC
GRIEMDLNESEKEKICKAALGLTLQEAENAFARAMVEDGKLNIDDIEVVLEEKCQVIKKT
CEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
GILEFMKSDLKMEDVGGLENLKRWISKRNKSWLDSAQKYNLPAPKGVLITGVPGCGKSLT
HHHHHHHHCCCCHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHH
AKAISAMWQLPLLRLDMGKIFSGVVGSSEENMRKAIKTAEAVSPSILWIDEIEKGFGGAS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCC
SSGDSGTSMRIFGTFLTWMQEKIKPVFVVATANNISNLPSELLRKGRFDEIFFVDLPTKN
CCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHHCCHHHHHHCCCCCEEEEEECCCCC
ERKDIFRLHLKKRLTNEEVCEEISVTDELLSNLADITEGFVGAEIEQAVIAALFEAFSED
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
RALKVTDLERVIKNTVPLSVTQREQIIKIREWANVRAVAATAKEDRSEYLEVNEEKKDEK
CCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
KGEDDIRISRGGRTIDF
CCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9119075; 11029001; 10356978 [H]