Click here to switch to the map view.

The map label for this gene is 153937081

Identifier: 153937081

GI number: 153937081

Start: 2035288

End: 2036355

Strand: Reverse

Name: 153937081

Synonym: CLC_1920

Alternate gene names: NA

Gene position: 2036355-2035288 (Counterclockwise)

Preceding gene: 153934603

Following gene: 153936319

Centisome position: 54.15

GC content: 29.03

Gene sequence:

>1068_bases
TTGGATAAAAGTTATCCGTGTGTAGAAATAAACCTTAAAAATATAGCTCATAATATTAAACAACTTATTGATTTATGCAA
TATAAAGGAAATAAAACCTGTAATAGTAACTAAATCCTTTTGTTCAGAAAAATCAGTAGTAGAAACTATAATAAAAGAAG
GAATTAAAACTATAGCAGATGCTAGAATGAAAAATCTTATGAAAATACAGGACTTAAAATGTGAAAAGCTTCTTCTACGT
ATACCTATGAAAAGCGAAGTTTCAAAGGTAATAGAATATTCAGATATAAGTTTAAATTCAGAGTTAGAAATTATAAAAGA
ATTATCAAAGGAAGCTAGGAAAGTTAATAAGATACATAAAATAATTCTTATGGTGGATTTAGGGGATCTAAGAGAGGGCG
TTCTTCCAAAGGATGCATTATCTACAGTAAAAGAAATAATAAAACTTCCAAACCTTAAATTTATAGGACTAGGAACGAAT
CTTACCTGTTATGGTGGAGTTATTCCGGATGAAAATAATCTGGGAAAACTATTAGAAATAAAGAATCAAATAGAAAAAGA
ATTAAAAATAAAGGTTTCTATAGTGTCTGGAGGAAATTCTAGTAGTTTACATATGATTGTAAACGATTCCATACCTAAAG
GTATAAACCAATTAAGAATAGGAGAGGCTGCTATATTAGGGAGGGAAACCGCTTATGGTCAAAAATTAAATGATTTTTAT
GAGGATTCTATAACTTTAGTAGGAGAAATTATAGAATTAAAAGAAAAGCCTTCTATGCCAGAAGGAAATATAGGATTAGA
TGCTTTTGGTAATAAACCAAGTTTTGAAGATAAAGGTATTATGAAAAGAGCCATACTTGCACTAGGACAGCAGGATATAA
AACTGGATGGTCTTATTCCTAAGGATAATGAAATAGAAATACTAGGAGCAAGCAGTGACCATTTATTATTAGATCTAACG
AAATGTAAAAACCAATATAAAATAGGAGATACTGTGGAGTTTAATATGAATTATGGATGTCTGCTCACAGCTATGACTTC
TGAATATGTAACTAAATATAGTAAATAA

Upstream 100 bases:

>100_bases
TTCTATAGTATTTTTTAATTTGATTAATAATTATTTCAAAACATATGAATTATATAGTATAATGTAGTAAGTTTATTAAA
ATAAATTGGGGGGTGAGCTT

Downstream 100 bases:

>100_bases
ATATTGCTTTATAAAATTGAATCTTATTAAAAGTCAATACTTATTAATTTTTCTTATAATTACATATTAAACCATAAATC
TTTCTTATTAGACAAAATAT

Product: alanine racemase domain-containing protein

Products: NA

Alternate protein names: Alanine Racemase Domain Protein; Alanine Racemase Domain-Containing Protein; Alanine Racemase N-Terminal Domain Family; Alanine Racemase N-Terminal Domain Protein; Alanine Racemase-Like Protein; Ornithine Racemase; Alanine Racemase N-Terminal

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MDKSYPCVEINLKNIAHNIKQLIDLCNIKEIKPVIVTKSFCSEKSVVETIIKEGIKTIADARMKNLMKIQDLKCEKLLLR
IPMKSEVSKVIEYSDISLNSELEIIKELSKEARKVNKIHKIILMVDLGDLREGVLPKDALSTVKEIIKLPNLKFIGLGTN
LTCYGGVIPDENNLGKLLEIKNQIEKELKIKVSIVSGGNSSSLHMIVNDSIPKGINQLRIGEAAILGRETAYGQKLNDFY
EDSITLVGEIIELKEKPSMPEGNIGLDAFGNKPSFEDKGIMKRAILALGQQDIKLDGLIPKDNEIEILGASSDHLLLDLT
KCKNQYKIGDTVEFNMNYGCLLTAMTSEYVTKYSK

Sequences:

>Translated_355_residues
MDKSYPCVEINLKNIAHNIKQLIDLCNIKEIKPVIVTKSFCSEKSVVETIIKEGIKTIADARMKNLMKIQDLKCEKLLLR
IPMKSEVSKVIEYSDISLNSELEIIKELSKEARKVNKIHKIILMVDLGDLREGVLPKDALSTVKEIIKLPNLKFIGLGTN
LTCYGGVIPDENNLGKLLEIKNQIEKELKIKVSIVSGGNSSSLHMIVNDSIPKGINQLRIGEAAILGRETAYGQKLNDFY
EDSITLVGEIIELKEKPSMPEGNIGLDAFGNKPSFEDKGIMKRAILALGQQDIKLDGLIPKDNEIEILGASSDHLLLDLT
KCKNQYKIGDTVEFNMNYGCLLTAMTSEYVTKYSK
>Mature_355_residues
MDKSYPCVEINLKNIAHNIKQLIDLCNIKEIKPVIVTKSFCSEKSVVETIIKEGIKTIADARMKNLMKIQDLKCEKLLLR
IPMKSEVSKVIEYSDISLNSELEIIKELSKEARKVNKIHKIILMVDLGDLREGVLPKDALSTVKEIIKLPNLKFIGLGTN
LTCYGGVIPDENNLGKLLEIKNQIEKELKIKVSIVSGGNSSSLHMIVNDSIPKGINQLRIGEAAILGRETAYGQKLNDFY
EDSITLVGEIIELKEKPSMPEGNIGLDAFGNKPSFEDKGIMKRAILALGQQDIKLDGLIPKDNEIEILGASSDHLLLDLT
KCKNQYKIGDTVEFNMNYGCLLTAMTSEYVTKYSK

Specific function: Unknown

COG id: COG3457

COG function: function code E; Predicted amino acid racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39550; Mature: 39550

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKSYPCVEINLKNIAHNIKQLIDLCNIKEIKPVIVTKSFCSEKSVVETIIKEGIKTIAD
CCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHH
ARMKNLMKIQDLKCEKLLLRIPMKSEVSKVIEYSDISLNSELEIIKELSKEARKVNKIHK
HHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
IILMVDLGDLREGVLPKDALSTVKEIIKLPNLKFIGLGTNLTCYGGVIPDENNLGKLLEI
EEEEEECCHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCCCCHHHHHH
KNQIEKELKIKVSIVSGGNSSSLHMIVNDSIPKGINQLRIGEAAILGRETAYGQKLNDFY
HHHHHHEEEEEEEEEECCCCCEEEEEEECCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHH
EDSITLVGEIIELKEKPSMPEGNIGLDAFGNKPSFEDKGIMKRAILALGQQDIKLDGLIP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCC
KDNEIEILGASSDHLLLDLTKCKNQYKIGDTVEFNMNYGCLLTAMTSEYVTKYSK
CCCCEEEEECCCCCEEEEHHHCCCCCCCCCEEEECCCCCEEEEHHHHHHHHHCCC
>Mature Secondary Structure
MDKSYPCVEINLKNIAHNIKQLIDLCNIKEIKPVIVTKSFCSEKSVVETIIKEGIKTIAD
CCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHH
ARMKNLMKIQDLKCEKLLLRIPMKSEVSKVIEYSDISLNSELEIIKELSKEARKVNKIHK
HHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
IILMVDLGDLREGVLPKDALSTVKEIIKLPNLKFIGLGTNLTCYGGVIPDENNLGKLLEI
EEEEEECCHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCCCCHHHHHH
KNQIEKELKIKVSIVSGGNSSSLHMIVNDSIPKGINQLRIGEAAILGRETAYGQKLNDFY
HHHHHHEEEEEEEEEECCCCCEEEEEEECCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHH
EDSITLVGEIIELKEKPSMPEGNIGLDAFGNKPSFEDKGIMKRAILALGQQDIKLDGLIP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCC
KDNEIEILGASSDHLLLDLTKCKNQYKIGDTVEFNMNYGCLLTAMTSEYVTKYSK
CCCCEEEEECCCCCEEEEHHHCCCCCCCCCEEEECCCCCEEEEHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA